Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 7.7e-68 260.4 135 100.0
Dinv01724 Davidia involucrata HOM05D008114 ORTHO05D010089 4.9e-22 108.2 66 87.9
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.8e-16 89.7 69 66.7
Hma1.2p1_1283F.1_g272780 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 4.5e-15 85.1 71 64.8
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 7.6e-15 84.3 71 63.4
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 2.2e-14 82.8 65 70.8
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 6.4e-14 81.3 75 60.0
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.4e-13 80.1 69 62.3
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.4e-13 80.1 69 62.3
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 5.5e-13 78.2 74 58.1
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 1.2e-12 77.0 70 60.0
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.2e-12 77.0 77 57.1
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 2.1e-12 76.3 68 58.8
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 3.5e-12 75.5 72 56.9
CiPaw.05G241900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.1e-10 70.5 75 52.0
CiPaw.05G242400 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.1e-10 70.5 75 52.0
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 1.9e-10 69.7 70 51.4
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 3.3e-10 68.9 74 50.0
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 3.3e-10 68.9 74 50.0
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 4.3e-10 68.6 68 52.9
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 4.3e-10 68.6 68 52.9
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 5.6e-10 68.2 76 51.3
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.3e-09 67.0 72 51.4
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 2.8e-09 65.9 70 54.3
Haze_00653 Corylus avellana HOM05D008114 ORTHO05D010089 6.2e-09 64.7 67 50.7
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 6.2e-09 64.7 69 55.1
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 1.4e-08 63.5 53 60.4
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 2.4e-08 62.8 54 61.1
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 3.1e-08 62.4 49 63.3
Cfa015838 Carpinus fangiana HOM05D008114 ORTHO05D010089 9.0e-08 60.8 71 54.9
QL93p0145_0019 Quercus lobata HOM05D008114 ORTHO05D010089 2.6e-07 59.3 69 50.7
Potri.010G120300 Populus trichocarpa HOM05D008114 ORTHO05D010089 4.5e-07 58.5 71 46.5
Manes.06G065000 Manihot esculenta HOM05D008114 ORTHO05D010089 5.8e-07 58.2 59 47.5
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 5.8e-07 58.2 60 50.0
QL01p010819 Quercus lobata HOM05D008114 ORTHO05D010089 7.6e-07 57.8 69 49.3
Ciclev10017364m.g Citrus clementina HOM05D008114 ORTHO05D010089 1.3e-06 57.0 74 47.3
Lsat_1_v5_gn_8_41420 Lactuca sativa HOM05D008114 ORTHO05D010089 1.3e-06 57.0 70 47.1
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 1.3e-06 57.0 65 49.2
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 1.7e-06 56.6 72 48.6
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 2.2e-06 56.2 49 55.1
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 2.2e-06 56.2 56 51.8
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 2.9e-06 55.8 67 56.7
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 2.9e-06 55.8 49 55.1
Lalb_Chr06g0165841 Lupinus albus HOM05D021627 ORTHO05D021511 2.9e-06 55.8 78 43.6
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.9e-06 55.1 56 50.0
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.5e-06 54.7 56 50.0


User provided reference genes

Program Settings