Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11772 Davidia involucrata HOM05D000780 ORTHO05D184386 2.9e-50 201.8 119 100.0
Dinv29786 Davidia involucrata HOM05D000780 ORTHO05D001132 1.2e-19 100.1 83 83.1
Lsat_1_v5_gn_6_66781 Lactuca sativa HOM05D000780 ORTHO05D001132 1.1e-14 83.6 83 72.3
Cc03_g06810 Coffea canephora HOM05D000780 ORTHO05D001132 1.5e-14 83.2 83 71.1
Lj3P637T16 Lonicera japonica HOM05D000780 ORTHO05D001132 3.3e-14 82.0 83 71.1
Oeu012937.1 Olea europaea HOM05D000780 ORTHO05D001132 5.7e-14 81.3 83 69.9
Haze_11493 Corylus avellana HOM05D000780 ORTHO05D001132 1.7e-13 79.7 83 66.3
Glyma.20G082450 Glycine max HOM05D000780 ORTHO05D001132 2.8e-13 79.0 83 62.7
QL06p021954 Quercus lobata HOM05D000780 ORTHO05D001132 3.7e-13 78.6 83 68.7
Phvul.007G231700 Phaseolus vulgaris HOM05D000780 ORTHO05D001132 1.1e-12 77.0 83 65.1
VMungo0720G1920 Vigna mungo HOM05D000780 ORTHO05D001132 1.1e-12 77.0 83 66.3
CSS0030613 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D001132 1.4e-12 76.6 79 69.6
HanXRQChr02g0059231 Helianthus annuus HOM05D000780 ORTHO05D001132 1.8e-12 76.3 83 65.1
Lalb_Chr03g0036901 Lupinus albus HOM05D000780 ORTHO05D001132 1.8e-12 76.3 83 67.5
DCAR_002293 Daucus carota HOM05D000780 ORTHO05D001132 2.4e-12 75.9 84 70.2
MSTRG.21930 Avicennia marina HOM05D000780 ORTHO05D001132 4.1e-12 75.1 83 66.3
Psat1g024160 Pisum sativum HOM05D000780 ORTHO05D001132 4.1e-12 75.1 83 66.3
Ca_11891_v3 Cicer arietinum L. HOM05D000780 ORTHO05D001132 5.3e-12 74.7 83 67.5
Medtr1g045550 Medicago truncatula HOM05D000780 ORTHO05D001132 6.9e-12 74.3 83 57.8
CSS0022328 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D001132 9.1e-12 73.9 83 61.4
CSS0045157 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D001132 9.1e-12 73.9 83 61.4
SGA_v2.0_scaffold86G26857 Striga asiatica HOM05D000780 ORTHO05D001132 9.1e-12 73.9 84 60.7
ECA232G1576 Erigeron canadensis HOM05D000780 ORTHO05D001132 1.2e-11 73.6 80 48.8
Migut.G00590 Erythranthe guttata HOM05D000780 ORTHO05D001132 1.5e-11 73.2 82 65.9
Cfa014813 Carpinus fangiana HOM05D000780 ORTHO05D001132 2.0e-11 72.8 83 61.4
CiPaw.01G175500 Carya illinoinensis HOM05D000780 ORTHO05D001132 2.0e-11 72.8 83 66.3
Migut.N00321 Erythranthe guttata HOM05D000780 ORTHO05D001132 2.0e-11 72.8 83 65.1
Oeu008814.1 Olea europaea HOM05D000780 ORTHO05D001132 2.0e-11 72.8 83 62.7
TPR.G23956 Trifolium pratense HOM05D000780 ORTHO05D001132 2.0e-11 72.8 83 55.4
Glyma.10G132300 Glycine max HOM05D000780 ORTHO05D001132 2.6e-11 72.4 83 59.0
unitig_748.g7338 Utricularia gibba HOM05D000780 ORTHO05D001132 2.6e-11 72.4 85 64.7
unitig_748.g8290 Utricularia gibba HOM05D000780 ORTHO05D001132 3.4e-11 72.0 83 62.7
Ciclev10023800m.g Citrus clementina HOM05D000780 ORTHO05D001132 7.7e-11 70.9 79 64.6
Lj6g0001958 Lotus japonicus HOM05D000780 ORTHO05D001132 7.7e-11 70.9 83 56.6
Solyc09g090730.2 Solanum lycopersicum HOM05D000780 ORTHO05D001132 7.7e-11 70.9 79 65.8
Sopen09g033670 Solanum pennellii HOM05D000780 ORTHO05D001132 7.7e-11 70.9 79 65.8
Ciclev10004812m.g Citrus clementina HOM05D000780 ORTHO05D001132 1.3e-10 70.1 84 64.3
FAN15G1607 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.3e-10 70.1 83 48.2
Nitab4.5_0002937g0040 Nicotiana tabacum HOM05D000780 ORTHO05D001132 1.3e-10 70.1 79 65.8
Nitab4.5_0003474g0010 Nicotiana tabacum HOM05D000780 ORTHO05D001132 1.3e-10 70.1 79 65.8
Potri.008G173800 Populus trichocarpa HOM05D000780 ORTHO05D001132 1.7e-10 69.7 83 53.0
ECA232G3215 Erigeron canadensis HOM05D000780 ORTHO05D001132 2.2e-10 69.3 83 63.9
CSS0041045 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D001132 3.8e-10 68.6 83 67.5
MSTRG.4190 Avicennia marina HOM05D000780 ORTHO05D001132 6.5e-10 67.8 83 53.0
FvH4_4g05160 Fragaria vesca HOM05D000780 ORTHO05D001132 6.5e-10 67.8 79 68.4
FAN12G3338 Fragaria x ananassa HOM05D000780 ORTHO05D001132 6.5e-10 67.8 79 68.4
Peaxi162Scf00125g00122 Petunia axillaris HOM05D000780 ORTHO05D001132 6.5e-10 67.8 79 60.8
PGR004G0632 Punica granatum HOM05D000780 ORTHO05D001132 8.5e-10 67.4 83 54.2
CANSAT78G1817 Cannabis sativa HOM05D000780 ORTHO05D001132 1.4e-09 66.6 85 62.4
CsaV3_3G011530 Cucumis sativus L. HOM05D000780 ORTHO05D001132 1.4e-09 66.6 76 60.5
FAN22G1265 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.4e-09 66.6 79 67.1
Sed0019797 Sechium edule HOM05D000780 ORTHO05D001132 1.4e-09 66.6 83 47.0
Lalb_Chr20g0113501 Lupinus albus HOM05D000780 ORTHO05D001132 1.9e-09 66.2 83 66.3
Nitab4.5_0000392g0090 Nicotiana tabacum HOM05D000780 ORTHO05D001132 1.9e-09 66.2 83 65.1
DCAR_030772 Daucus carota HOM05D000780 ORTHO05D001132 2.5e-09 65.9 79 60.8
unitig_32.g11689 Utricularia gibba HOM05D000780 ORTHO05D001132 3.2e-09 65.5 83 55.4
MELO3C006363.2 Cucumis melo HOM05D000780 ORTHO05D001132 4.2e-09 65.1 76 63.2
SalBow2G1081 Salvia bowleyana HOM05D000780 ORTHO05D001132 5.5e-09 64.7 83 54.2
Potri.010G063500 Populus trichocarpa HOM05D000780 ORTHO05D001132 7.2e-09 64.3 83 51.8
TWI60G1676 Tripterygium wilfordii HOM05D000780 ORTHO05D001132 7.2e-09 64.3 84 54.8
GSVIVG01001853001 Vitis vinifera HOM05D000780 ORTHO05D017159 9.4e-09 63.9 83 60.2
Peaxi162Scf00043g00216 Petunia axillaris HOM05D000780 ORTHO05D001132 1.2e-08 63.5 83 62.7
RcHm_v2.0_Chr4g0396081 Rosa chinensis HOM05D000780 ORTHO05D001132 1.2e-08 63.5 83 63.9
Thecc.01G247400 Theobroma cacao HOM05D000780 ORTHO05D001132 1.2e-08 63.5 83 61.4
QL03p032485 Quercus lobata HOM05D000780 ORTHO05D001132 1.6e-08 63.2 83 59.0
vmacro00536 Vaccinium macrocarpon HOM05D000780 ORTHO05D001132 1.6e-08 63.2 82 62.2
CsaV3_2G012160 Cucumis sativus L. HOM05D000780 ORTHO05D001132 2.7e-08 62.4 83 61.4
SalBow3G0409 Salvia bowleyana HOM05D000780 ORTHO05D001132 2.7e-08 62.4 83 61.4
TWI18G1096 Tripterygium wilfordii HOM05D000780 ORTHO05D001132 2.7e-08 62.4 83 54.2
FvH4_2g20250 Fragaria vesca HOM05D000780 ORTHO05D001132 3.6e-08 62.0 83 61.4
FAN24G0167 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.6e-08 62.0 83 61.4
QL03p018181 Quercus lobata HOM05D000780 ORTHO05D001132 3.6e-08 62.0 83 57.8
Dinv43052 Davidia involucrata HOM05D000780 ORTHO05D001132 4.7e-08 61.6 83 59.0
Prupe.1G573000 Prunus persica HOM05D000780 ORTHO05D001132 4.7e-08 61.6 83 62.7
Prupe.8G213000 Prunus persica HOM05D000780 ORTHO05D001132 4.7e-08 61.6 83 62.7
Sabra02G0193900 Salix brachista HOM05D000780 ORTHO05D001132 7.9e-08 60.8 79 63.3
AUR62035890 Chenopodium quinoa HOM05D000780 ORTHO05D001132 1.0e-07 60.5 78 60.3
Psat3g052320 Pisum sativum HOM05D000780 ORTHO05D001132 1.0e-07 60.5 83 60.2
RcHm_v2.0_Chr6g0286021 Rosa chinensis HOM05D000780 ORTHO05D001132 1.0e-07 60.5 83 61.4
Aqoxy5G00101 Aquilegia oxysepala HOM05D000780 ORTHO05D001132 1.4e-07 60.1 83 63.9
COL.COLO4_06488 Corchorus olitorius HOM05D000780 ORTHO05D001132 1.4e-07 60.1 83 62.7
Hma1.2p1_0130F.1_g060500 Hydrangea macrophylla HOM05D000780 ORTHO05D001132 1.4e-07 60.1 83 59.0
Manes.08G141800 Manihot esculenta HOM05D000780 ORTHO05D001132 1.4e-07 60.1 83 50.6
Potri.002G255000 Populus trichocarpa HOM05D000780 ORTHO05D001132 1.8e-07 59.7 79 62.0
TWI12G0758 Tripterygium wilfordii HOM05D000780 ORTHO05D001132 1.8e-07 59.7 83 59.0
CDE11G1081 Ceratophyllum demersum HOM05D000780 ORTHO05D001132 2.3e-07 59.3 84 48.8
MD05G1186200 Malus domestica HOM05D000780 ORTHO05D001132 2.3e-07 59.3 82 62.2
BolC7t46116H Brassica oleracea HOM05D000780 ORTHO05D001132 3.0e-07 58.9 84 58.3
Cpa.g.sc87.55 Carica papaya HOM05D000780 ORTHO05D001132 3.0e-07 58.9 83 49.4
MELO3C023074.2 Cucumis melo HOM05D000780 ORTHO05D001132 3.0e-07 58.9 83 56.6
Duzib133G0991 Durio zibethinus HOM05D000780 ORTHO05D001132 3.0e-07 58.9 79 54.4
Oeu055043.1 Olea europaea HOM05D000780 ORTHO05D017159 3.0e-07 58.9 83 59.0
CDE05G1575 Ceratophyllum demersum HOM05D000780 ORTHO05D001132 3.9e-07 58.5 84 47.6
TWI73G0554 Tripterygium wilfordii HOM05D000780 ORTHO05D001132 3.9e-07 58.5 79 59.5
C07p56370 Brassica napus HOM05D000780 ORTHO05D001132 5.1e-07 58.2 84 57.1
Cc01_g17670 Coffea canephora HOM05D000780 ORTHO05D001132 5.1e-07 58.2 83 54.2
Manes.03G156400 Manihot esculenta HOM05D000780 ORTHO05D001132 5.1e-07 58.2 79 51.9
Medtr7g113340 Medicago truncatula HOM05D000780 ORTHO05D001132 5.1e-07 58.2 83 60.2
HanXRQChr16g0520731 Helianthus annuus HOM05D000780 ORTHO05D001132 6.7e-07 57.8 80 58.8
Manes.12G039000 Manihot esculenta HOM05D000780 ORTHO05D001132 6.7e-07 57.8 82 61.0
Prupe.1G052400 Prunus persica HOM05D000780 ORTHO05D001132 6.7e-07 57.8 82 61.0
PGR044G0414 Punica granatum HOM05D000780 ORTHO05D001132 6.7e-07 57.8 82 61.0
QL09p042425 Quercus lobata HOM05D000780 ORTHO05D001132 6.7e-07 57.8 79 62.0
A03p58350 Brassica napus HOM05D000780 ORTHO05D001132 8.8e-07 57.4 84 57.1
BraA03t14897Z Brassica rapa HOM05D000780 ORTHO05D001132 8.8e-07 57.4 84 57.1
PGR142G0025 Punica granatum HOM05D000780 ORTHO05D001132 8.8e-07 57.4 79 57.0
Sc06g0005310 Simmondsia chinensis HOM05D000780 ORTHO05D001132 8.8e-07 57.4 84 42.9
Thhalv10024961m.g Eutrema salsugineum HOM05D000780 ORTHO05D001132 1.1e-06 57.0 84 57.1
Sed0006994 Sechium edule HOM05D000780 ORTHO05D001132 1.1e-06 57.0 83 56.6
VMungo1383G0420 Vigna mungo HOM05D000780 ORTHO05D001132 1.1e-06 57.0 83 59.0
EL10Ac3g06718 Beta vulgaris HOM05D000780 ORTHO05D001132 1.5e-06 56.6 79 58.2
Lj6A638T58 Lonicera japonica HOM05D000780 ORTHO05D001132 1.5e-06 56.6 83 59.0
Lj6A639T40 Lonicera japonica HOM05D000780 ORTHO05D001132 1.5e-06 56.6 83 59.0
Medtr7g098930 Medicago truncatula HOM05D000780 ORTHO05D001132 1.5e-06 56.6 83 59.0
PSO017G3867 Papaver somniferum HOM05D000780 ORTHO05D001132 1.5e-06 56.6 78 51.3
PSO170G5604 Papaver somniferum HOM05D000780 ORTHO05D001132 1.5e-06 56.6 78 51.3
Aa31LG9G4160 Aethionema arabicum HOM05D000780 ORTHO05D001132 2.0e-06 56.2 79 55.7
AL5G12290 Arabidopsis lyrata HOM05D000780 ORTHO05D001132 2.0e-06 56.2 79 60.8
AL7G43540 Arabidopsis lyrata HOM05D000780 ORTHO05D001132 2.0e-06 56.2 79 60.8
AT4G13510 Arabidopsis thaliana HOM05D000780 ORTHO05D001132 2.0e-06 56.2 79 62.0
Eucgr.K01403 Eucalyptus grandis HOM05D000780 ORTHO05D001132 2.0e-06 56.2 84 60.7
MD13G1225400 Malus domestica HOM05D000780 ORTHO05D001132 2.0e-06 56.2 82 61.0
MD16G1230500 Malus domestica HOM05D000780 ORTHO05D001132 2.0e-06 56.2 82 62.2
Nn3g19825 Nelumbo nucifera HOM05D000780 ORTHO05D001132 2.0e-06 56.2 83 49.4
Sed0010027 Sechium edule HOM05D000780 ORTHO05D001132 2.0e-06 56.2 83 51.8
Carub.0007s2903 Capsella rubella HOM05D000780 ORTHO05D001132 2.6e-06 55.8 79 60.8
CARHR219140 Cardamine hirsuta HOM05D000780 ORTHO05D001132 2.6e-06 55.8 79 64.6
Phvul.001G166900 Phaseolus vulgaris HOM05D000780 ORTHO05D001132 2.6e-06 55.8 83 57.8
Potri.002G255100 Populus trichocarpa HOM05D000780 ORTHO05D001132 2.6e-06 55.8 83 57.8
TAR633G1129 Trochodendron aralioides HOM05D000780 ORTHO05D001132 2.6e-06 55.8 83 61.4
Ah.04g153510 Amaranthus hybridus HOM05D000780 ORTHO05D001132 3.3e-06 55.5 80 46.2
CsaV3_2G010040 Cucumis sativus L. HOM05D000780 ORTHO05D001132 3.3e-06 55.5 84 45.2
Eucgr.B02160 Eucalyptus grandis HOM05D000780 ORTHO05D001132 3.3e-06 55.5 82 51.2
Lj1g0021548 Lotus japonicus HOM05D000780 ORTHO05D001132 3.3e-06 55.5 79 57.0
CARHR056130 Cardamine hirsuta HOM05D000780 ORTHO05D001132 4.4e-06 55.1 85 55.3
CiPaw.03G272300 Carya illinoinensis HOM05D000780 ORTHO05D001132 4.4e-06 55.1 82 58.5
FAN17G0569 Fragaria x ananassa HOM05D000780 ORTHO05D001132 4.4e-06 55.1 79 62.0
Manes.15G047400 Manihot esculenta HOM05D000780 ORTHO05D001132 4.4e-06 55.1 79 54.4
Sabra10G0043400 Salix brachista HOM05D000780 ORTHO05D001132 4.4e-06 55.1 83 50.6
AL9U10010 Arabidopsis lyrata HOM05D000780 ORTHO05D001132 5.7e-06 54.7 79 62.0
BcaNung01376 Brassica carinata HOM05D000780 ORTHO05D001132 5.7e-06 54.7 84 56.0
A01p09250 Brassica napus HOM05D000780 ORTHO05D001132 5.7e-06 54.7 84 56.0
C01p10830 Brassica napus HOM05D000780 ORTHO05D001132 5.7e-06 54.7 84 56.0
BolC1t01045H Brassica oleracea HOM05D000780 ORTHO05D001132 5.7e-06 54.7 84 56.0
BraA01t00868Z Brassica rapa HOM05D000780 ORTHO05D001132 5.7e-06 54.7 84 56.0
FvH4_6g01460 Fragaria vesca HOM05D000780 ORTHO05D001132 5.7e-06 54.7 86 55.8
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 5.7e-06 54.7 86 55.8
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 5.7e-06 54.7 86 55.8
Lalb_Chr21g0314161 Lupinus albus HOM05D000780 ORTHO05D001132 5.7e-06 54.7 82 54.9
MD04G1233500 Malus domestica HOM05D000780 ORTHO05D001132 5.7e-06 54.7 85 57.6
Sp7g26670 Schrenkiella parvula HOM05D000780 ORTHO05D001132 5.7e-06 54.7 84 56.0
Sed0007863 Sechium edule HOM05D000780 ORTHO05D001132 5.7e-06 54.7 83 59.0
TPR.G20065 Trifolium pratense HOM05D000780 ORTHO05D001132 5.7e-06 54.7 83 57.8
BcaB07g33050 Brassica carinata HOM05D000780 ORTHO05D001132 7.4e-06 54.3 79 49.4
BcaC08g44303 Brassica carinata HOM05D000780 ORTHO05D001132 7.4e-06 54.3 79 49.4
A05p16550 Brassica napus HOM05D000780 ORTHO05D001132 7.4e-06 54.3 79 49.4
C06p17280 Brassica napus HOM05D000780 ORTHO05D001132 7.4e-06 54.3 79 49.4
BolC6t36925H Brassica oleracea HOM05D000780 ORTHO05D001132 7.4e-06 54.3 79 49.4
BraA05t20560Z Brassica rapa HOM05D000780 ORTHO05D001132 7.4e-06 54.3 79 49.4
arahy.Tifrunner.gnm1.ann1.E0EAR0 Arachis hypogaea HOM05D000780 ORTHO05D001132 9.7e-06 53.9 86 54.7
A09p00310 Brassica napus HOM05D000780 ORTHO05D001132 9.7e-06 53.9 84 54.8
BraA09t35758Z Brassica rapa HOM05D000780 ORTHO05D001132 9.7e-06 53.9 84 54.8
CARHR236470 Cardamine hirsuta HOM05D000780 ORTHO05D001132 9.7e-06 53.9 81 56.8
ECA238G0721 Erigeron canadensis HOM05D000780 ORTHO05D001132 9.7e-06 53.9 80 56.2
Thhalv10024967m.g Eutrema salsugineum HOM05D000780 ORTHO05D001132 9.7e-06 53.9 79 49.4
PSO170G5974 Papaver somniferum HOM05D000780 ORTHO05D001132 9.7e-06 53.9 78 50.0
Sp7g11100 Schrenkiella parvula HOM05D000780 ORTHO05D001132 9.7e-06 53.9 79 49.4


User provided reference genes

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