Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 8.3e-132 473.8 250 100.0
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.1e-79 299.7 256 67.2
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 7.6e-77 291.2 252 69.4
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 4.9e-76 288.5 256 65.2
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 1.2e-74 283.9 255 68.6
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 1.2e-74 283.9 257 62.6
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 2.1e-71 273.1 256 62.1
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 6.2e-71 271.6 257 59.1
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 1.5e-69 266.9 254 65.4
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 3.4e-69 265.8 257 62.6
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 7.6e-69 264.6 254 61.4
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 3.8e-68 262.3 258 61.6
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 4.2e-67 258.8 256 59.0
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 5.5e-67 258.5 273 59.3
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 4.6e-66 255.4 256 59.4
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 6.0e-66 255.0 242 61.2
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 5.1e-65 251.9 258 59.7
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 5.1e-65 251.9 240 60.8
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 6.7e-65 251.5 256 57.8
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.1e-63 246.5 251 58.6
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 1.4e-62 243.8 257 56.4
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 1.8e-62 243.4 252 61.9
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 5.3e-62 241.9 251 59.4
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 4.5e-61 238.8 254 57.5
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.3e-60 237.3 258 56.2
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 2.9e-60 236.1 258 55.8
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.9e-60 236.1 258 55.8
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 3.8e-60 235.7 255 57.6
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 6.5e-60 235.0 251 57.0
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.1e-59 234.2 251 56.2
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 4.6e-58 228.8 256 57.8
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 3.9e-57 225.7 258 56.2
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 3.9e-57 225.7 258 55.8
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 6.7e-57 224.9 258 56.2
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 9.6e-56 221.1 245 54.7
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 1.6e-55 220.3 250 53.6
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.6e-55 220.3 239 57.3
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 1.4e-54 217.2 260 55.0
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 1.4e-54 217.2 259 52.9
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 2.4e-54 216.5 212 59.0
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 5.3e-54 215.3 249 55.4
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 5.3e-54 215.3 244 54.9
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 2.6e-53 213.0 259 52.9
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 3.4e-53 212.6 260 54.6
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.7e-52 210.3 198 61.6
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 3.8e-52 209.1 256 50.0
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 3.2e-51 206.1 242 54.5
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 7.2e-51 204.9 259 49.8
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 1.6e-50 203.8 258 48.4
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 3.6e-50 202.6 258 51.6
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 6.1e-50 201.8 257 49.0
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 1.3e-49 200.7 257 52.5
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 6.7e-49 198.4 250 52.0
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 8.7e-49 198.0 252 48.8
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 8.7e-49 198.0 261 51.0
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 1.1e-48 197.6 261 50.6
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 1.9e-48 196.8 261 50.6
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 1.3e-47 194.1 201 55.2
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.6e-47 193.7 253 48.2
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 2.8e-47 193.0 238 50.8
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 8.2e-47 191.4 251 47.8
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 3.1e-46 189.5 179 63.1
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 3.1e-46 189.5 259 49.8
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 2.6e-45 186.4 241 51.9
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 5.9e-45 185.3 208 53.8
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 1.3e-44 184.1 250 46.8
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.9e-44 183.0 250 48.0
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 1.1e-43 181.0 229 50.2
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 1.4e-43 180.6 232 49.6
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 4.2e-43 179.1 258 46.5
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 1.2e-42 177.6 254 51.2
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 1.6e-42 177.2 249 47.4
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 2.1e-42 176.8 257 45.9
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 2.7e-42 176.4 232 49.1
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 4.6e-42 175.6 105 84.8
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 4.6e-42 175.6 105 84.8
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 7.9e-42 174.9 201 56.2
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 1.1e-40 171.0 251 44.2
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 4.8e-39 165.6 133 72.9
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 6.9e-38 161.8 253 43.9
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 2.6e-37 159.8 254 45.7
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 5.9e-37 158.7 253 43.1
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 7.7e-37 158.3 223 48.9
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.0e-36 157.9 164 54.9
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 8.5e-36 154.8 251 43.4
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 1.1e-35 154.5 251 41.0
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 1.4e-35 154.1 149 58.4
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 3.2e-35 152.9 116 69.0
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 3.2e-35 152.9 116 69.0
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 3.2e-35 152.9 116 69.0
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 3.2e-35 152.9 116 69.0
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 3.2e-35 152.9 116 69.0
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 5.5e-35 152.1 145 58.6
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 5.5e-35 152.1 145 58.6
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 7.2e-35 151.8 139 60.4
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 7.2e-35 151.8 145 58.6
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 2.1e-34 150.2 132 61.4
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 3.6e-34 149.4 151 57.0
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 4.7e-34 149.1 172 55.2
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 7.9e-34 148.3 183 50.8
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-33 147.5 116 67.2
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.4e-30 136.7 162 53.1
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 3.8e-28 129.4 170 54.1
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 5.0e-28 129.0 202 46.5
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 5.5e-27 125.6 136 58.1
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 1.4e-25 120.9 83 69.9
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 2.7e-21 106.7 208 34.1
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 7.7e-21 105.1 194 40.2
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 5.2e-17 92.4 169 40.8
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 6.3e-07 58.9 64 51.6


User provided reference genes

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