Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 7.2e-87 323.9 171 100.0
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.1e-45 187.2 178 60.1
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.1e-45 187.2 178 60.1
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 3.2e-42 175.6 172 59.3
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 9.3e-42 174.1 121 76.0
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 6.0e-41 171.4 172 58.1
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.8e-37 159.8 172 57.0
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 8.4e-35 151.0 172 53.5
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 4.6e-33 145.2 172 54.1
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 7.8e-33 144.4 171 53.8
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 3.9e-32 142.1 171 53.8
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 6.6e-32 141.4 173 52.0
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 1.5e-31 140.2 174 52.3
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.8e-30 136.0 193 43.5
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 4.8e-30 135.2 172 49.4
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 4.8e-30 135.2 172 52.3
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 4.0e-29 132.1 195 47.2
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 5.3e-29 131.7 173 50.3
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 6.9e-29 131.3 114 64.0
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 6.9e-29 131.3 168 48.8
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 4.5e-28 128.6 172 50.6
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 5.8e-28 128.3 172 45.9
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 1.3e-27 127.1 176 49.4
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 6.4e-27 124.8 171 48.5
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 1.4e-26 123.6 165 49.7
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 1.9e-26 123.2 177 48.0
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 4.2e-26 122.1 162 51.9
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 9.3e-26 120.9 175 46.9
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 9.3e-26 120.9 162 51.2
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 1.2e-25 120.6 176 47.2
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.7e-25 119.4 172 44.2
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 2.3e-24 116.3 171 46.2
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 6.7e-24 114.8 173 45.7
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 1.5e-23 113.6 174 44.3
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 1.9e-23 113.2 193 46.6
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 2.8e-22 109.4 115 54.8
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 6.2e-22 108.2 169 45.0
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.1e-21 107.5 186 43.0
Duzib150G1248 Durio zibethinus HOM05D008192 ORTHO05D010301 3.4e-20 102.4 173 45.1
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 4.5e-20 102.1 163 42.9
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 7.6e-20 101.3 162 44.4
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 1.0e-19 100.9 163 42.3
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 1.0e-19 100.9 137 48.9
Nitab4.5_0010499g0010 Nicotiana tabacum HOM05D008192 ORTHO05D010301 3.8e-19 99.0 173 42.8
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 4.9e-19 98.6 157 45.2
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 6.5e-19 98.2 156 46.8
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 1.1e-18 97.4 103 56.3
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 1.4e-18 97.1 171 43.9
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 1.4e-18 97.1 121 47.1
Ah.10g025590 Amaranthus hybridus HOM05D008192 ORTHO05D010301 3.2e-18 95.9 167 40.1
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 3.2e-18 95.9 116 48.3
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 3.2e-18 95.9 116 48.3
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 1.8e-16 90.1 168 37.5
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 1.8e-16 90.1 176 43.2
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 3.9e-16 89.0 234 35.0
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 1.1e-15 87.4 176 42.0
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 1.3e-14 84.0 160 40.0
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 2.1e-14 83.2 105 46.7
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 2.8e-14 82.8 169 40.8
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 3.7e-14 82.4 171 38.0
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 8.2e-14 81.3 97 48.5
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.4e-13 80.5 170 35.3
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 1.4e-13 80.5 101 49.5
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 1.8e-13 80.1 150 37.3
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 2.4e-13 79.7 94 48.9
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 2.4e-13 79.7 101 48.5
Hund02985 Selenicereus undatus HOM05D008192 ORTHO05D010301 2.4e-13 79.7 183 36.6
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 2.4e-13 79.7 150 39.3
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.2e-12 77.4 96 49.0
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 1.2e-12 77.4 150 39.3
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 1.5e-12 77.0 115 47.0
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 2.0e-12 76.6 197 33.0
arahy.Tifrunner.gnm1.ann1.D8U9UB Arachis hypogaea HOM05D008192 ORTHO05D010301 2.0e-12 76.6 166 39.2
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 2.0e-12 76.6 118 40.7
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 2.6e-12 76.3 122 41.8
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 4.5e-12 75.5 82 56.1
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 7.6e-12 74.7 123 39.8
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 7.6e-12 74.7 76 53.9
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 2.2e-11 73.2 155 38.7
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 2.2e-11 73.2 114 43.0
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 2.9e-11 72.8 200 34.0
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 5.0e-11 72.0 122 39.3
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 5.0e-11 72.0 165 38.2
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 6.5e-11 71.6 104 42.3
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 6.5e-11 71.6 111 42.3
Sopen06g014330 Solanum pennellii HOM05D000014 ORTHO05D010301 6.5e-11 71.6 141 41.1
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 8.4e-11 71.2 108 41.7
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 8.4e-11 71.2 102 44.1
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.1e-10 70.9 104 44.2
Dinv31630 Davidia involucrata HOM05D001186 ORTHO05D000971 1.9e-10 70.1 42 81.0
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 1.9e-10 70.1 138 35.5
Lalb_Chr24g0401951 Lupinus albus HOM05D008192 ORTHO05D010301 2.5e-10 69.7 158 36.1
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 4.2e-10 68.9 109 38.5
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 5.5e-10 68.6 97 47.4
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 5.5e-10 68.6 97 47.4
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 5.5e-10 68.6 179 32.4
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 5.5e-10 68.6 154 39.6
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 7.1e-10 68.2 92 42.4
PSO384G1085 Papaver somniferum HOM05D003759 ORTHO05D004149 7.1e-10 68.2 197 32.5
arahy.Tifrunner.gnm1.ann1.XVGB1U Arachis hypogaea HOM05D008192 ORTHO05D010301 9.3e-10 67.8 191 35.1
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 9.3e-10 67.8 113 36.3
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 9.3e-10 67.8 93 41.9
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 9.3e-10 67.8 256 28.5
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 1.6e-09 67.0 115 40.9
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 1.6e-09 67.0 93 45.2
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 2.1e-09 66.6 123 39.0
FAN23G1979 Fragaria x ananassa HOM05D003759 ORTHO05D004149 2.1e-09 66.6 115 35.7
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 2.7e-09 66.2 156 33.3
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 3.5e-09 65.9 123 39.0
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 4.6e-09 65.5 104 39.4
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 4.6e-09 65.5 219 31.5
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 4.6e-09 65.5 89 46.1
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 6.1e-09 65.1 105 40.0
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 6.1e-09 65.1 107 43.0
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 1.0e-08 64.3 59 55.9
RcHm_v2.0_Chr2g0085521 Rosa chinensis HOM05D003759 ORTHO05D004149 1.0e-08 64.3 113 34.5
FvH4_1g00810 Fragaria vesca HOM05D003759 ORTHO05D004149 1.3e-08 63.9 113 35.4
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 1.3e-08 63.9 154 32.5
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 1.8e-08 63.5 111 39.6
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 1.8e-08 63.5 82 46.3
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 1.8e-08 63.5 123 35.8
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 2.3e-08 63.2 66 54.5
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 2.3e-08 63.2 102 39.2
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 2.3e-08 63.2 102 39.2
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 2.3e-08 63.2 74 55.4
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 3.0e-08 62.8 113 38.9
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 3.9e-08 62.4 146 34.2
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 3.9e-08 62.4 74 48.6
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 3.9e-08 62.4 150 34.0
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 5.1e-08 62.0 115 38.3
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 5.1e-08 62.0 87 42.5
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 5.1e-08 62.0 126 34.9
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 6.7e-08 61.6 99 40.4
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 1.1e-07 60.8 153 34.0
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 1.1e-07 60.8 86 39.5
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 1.5e-07 60.5 201 35.3
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.5e-07 60.5 252 27.4
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 1.5e-07 60.5 95 45.3
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.5e-07 60.5 93 41.9
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 2.5e-07 59.7 146 32.2
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 3.3e-07 59.3 120 36.7
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 3.3e-07 59.3 109 38.5
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 3.3e-07 59.3 74 48.6
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 3.3e-07 59.3 74 48.6
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 3.3e-07 59.3 94 41.5
BolC1t00818H Brassica oleracea HOM05D003759 ORTHO05D004149 4.3e-07 58.9 204 33.8
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 4.3e-07 58.9 149 32.2
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 4.3e-07 58.9 85 44.7
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 4.3e-07 58.9 153 34.0
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 4.3e-07 58.9 185 32.4
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 5.7e-07 58.5 200 34.5
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 5.7e-07 58.5 109 34.9
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 7.4e-07 58.2 200 34.5
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 7.4e-07 58.2 92 45.7
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 7.4e-07 58.2 98 34.7
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 9.7e-07 57.8 201 34.8
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 9.7e-07 57.8 74 43.2
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 1.3e-06 57.4 59 52.5
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 1.3e-06 57.4 79 41.8
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.3e-06 57.4 56 55.4
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 1.3e-06 57.4 77 48.1
Sed0022175 Sechium edule HOM05D003759 ORTHO05D004149 1.3e-06 57.4 112 37.5
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 1.6e-06 57.0 117 36.8
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 1.6e-06 57.0 251 26.3
HPP92_018342 Vanilla planifolia HOM05D003759 ORTHO05D004149 1.6e-06 57.0 184 29.9
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.2e-06 56.6 101 34.7
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 2.2e-06 56.6 101 34.7
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 2.2e-06 56.6 252 27.4
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 2.2e-06 56.6 94 42.6
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 2.2e-06 56.6 135 34.1
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 2.8e-06 56.2 173 30.1
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 2.8e-06 56.2 94 41.5
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 3.7e-06 55.8 146 31.5
VMungo0647G0321 Vigna mungo HOM05D008192 ORTHO05D010301 3.7e-06 55.8 157 31.8
A03p60150 Brassica napus HOM05D003759 ORTHO05D004149 6.3e-06 55.1 193 31.6
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 6.3e-06 55.1 193 31.6
CDE02G3703 Ceratophyllum demersum HOM05D003759 ORTHO05D004149 6.3e-06 55.1 81 40.7
Thhalv10014665m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 6.3e-06 55.1 209 29.2
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 6.3e-06 55.1 130 36.2
ATR0580G180 Amborella trichopoda HOM05D003759 ORTHO05D004149 8.2e-06 54.7 94 39.4
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 8.2e-06 54.7 125 37.6


User provided reference genes

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