Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05485 Davidia involucrata HOM05D000072 ORTHO05D185154 1.3e-108 396.4 192 100.0
Dinv05483 Davidia involucrata HOM05D000072 ORTHO05D000026 2.7e-29 132.9 78 85.9
Dinv29298 Davidia involucrata HOM05D000072 ORTHO05D000026 4.9e-15 85.5 236 33.5
Dinv05645 Davidia involucrata HOM05D001208 ORTHO05D001593 2.9e-12 76.3 223 31.4
Lj5C556T3 Lonicera japonica HOM05D000354 ORTHO05D000717 6.6e-12 75.1 199 33.7
GSVIVG01038723001 Vitis vinifera HOM05D000072 ORTHO05D000026 2.5e-11 73.2 57 63.2
Dinv05487 Davidia involucrata HOM05D000072 ORTHO05D000717 2.8e-10 69.7 233 30.9
GSVIVG01038721001 Vitis vinifera HOM05D000072 ORTHO05D000026 6.1e-10 68.6 87 48.3
Nn2g15081 Nelumbo nucifera HOM05D000072 ORTHO05D000026 8.0e-10 68.2 57 59.6
Nn2g15087 Nelumbo nucifera HOM05D000072 ORTHO05D000026 8.0e-10 68.2 57 57.9
TAR629G1298 Trochodendron aralioides HOM05D000072 ORTHO05D000026 8.0e-10 68.2 57 56.1
TAR629G2160 Trochodendron aralioides HOM05D000072 ORTHO05D000026 8.0e-10 68.2 57 54.4
Potri.012G003200 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.4e-09 67.4 58 56.9
TAR629G0631 Trochodendron aralioides HOM05D000072 ORTHO05D000026 1.4e-09 67.4 57 54.4
Potri.015G018200 Populus trichocarpa HOM05D000072 ORTHO05D000026 8.9e-09 64.7 57 56.1
Potri.015G018050 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.2e-08 64.3 57 56.1
Rhsim09G0156300 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.2e-08 64.3 61 52.5
Potri.007G125600 Populus trichocarpa HOM05D000072 ORTHO05D000026 2.0e-08 63.5 58 55.2
Thecc.10G099300 Theobroma cacao HOM05D000072 ORTHO05D000026 2.0e-08 63.5 57 59.6
Thecc.10G099600 Theobroma cacao HOM05D000072 ORTHO05D000026 2.0e-08 63.5 57 59.6
Thecc.K0005500 Theobroma cacao HOM05D000072 ORTHO05D000026 2.0e-08 63.5 57 59.6
Thecc.K0005600 Theobroma cacao HOM05D000072 ORTHO05D000026 2.0e-08 63.5 57 59.6
TAR375G0383 Trochodendron aralioides HOM05D000072 ORTHO05D000026 2.0e-08 63.5 57 49.1
Nn1g00527 Nelumbo nucifera HOM05D000072 ORTHO05D000026 2.6e-08 63.2 58 56.9
vmacro06557 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 2.6e-08 63.2 59 52.5
Manes.04G044900 Manihot esculenta HOM05D000072 ORTHO05D000026 3.4e-08 62.8 58 55.2
Potri.012G003000 Populus trichocarpa HOM05D000072 ORTHO05D000026 3.4e-08 62.8 58 55.2
Potri.012G003450 Populus trichocarpa HOM05D000072 ORTHO05D000026 3.4e-08 62.8 58 55.2
Potri.012G003500 Populus trichocarpa HOM05D000072 ORTHO05D000026 3.4e-08 62.8 58 55.2
QL12p039556 Quercus lobata HOM05D000072 ORTHO05D000026 3.4e-08 62.8 58 53.4
Manes.14G006972 Manihot esculenta HOM05D000072 ORTHO05D000026 4.4e-08 62.4 58 53.4
Rhsim09G0156500 Rhododendron simsii HOM05D000072 ORTHO05D000026 4.4e-08 62.4 58 53.4
Rhsim09G0157100 Rhododendron simsii HOM05D000072 ORTHO05D000026 4.4e-08 62.4 58 53.4
TAR629G1455 Trochodendron aralioides HOM05D000072 ORTHO05D000026 4.4e-08 62.4 57 50.9
Thecc.03G195100 Theobroma cacao HOM05D000072 ORTHO05D000026 5.8e-08 62.0 58 56.9
Gohir.D09G051000 Gossypium hirsutum HOM05D000072 ORTHO05D000026 7.5e-08 61.6 57 54.4
QL09p010101 Quercus lobata HOM05D000072 ORTHO05D000026 7.5e-08 61.6 58 51.7
Duzib068G0316 Durio zibethinus HOM05D000072 ORTHO05D000026 1.3e-07 60.8 57 52.6
Gohir.D04G002250 Gossypium hirsutum HOM05D000072 ORTHO05D000026 1.3e-07 60.8 58 53.4
Gohir.D04G002300 Gossypium hirsutum HOM05D000072 ORTHO05D000026 1.3e-07 60.8 58 53.4
Gorai.006G058700 Gossypium raimondii HOM05D000072 ORTHO05D000026 1.3e-07 60.8 57 52.6
Oeu060615.1 Olea europaea HOM05D000072 ORTHO05D000026 1.3e-07 60.8 57 52.6
Oeu060620.2 Olea europaea HOM05D000072 ORTHO05D000026 1.3e-07 60.8 57 52.6
QL09p009762 Quercus lobata HOM05D000072 ORTHO05D000026 1.3e-07 60.8 58 51.7
Rhsim09G0156800 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.3e-07 60.8 58 53.4
Duzib205G0117 Durio zibethinus HOM05D000072 ORTHO05D000026 1.7e-07 60.5 57 50.9
Manes.11G116500 Manihot esculenta HOM05D000072 ORTHO05D000026 1.7e-07 60.5 58 53.4
Potri.007G126200 Populus trichocarpa HOM05D000072 ORTHO05D000026 1.7e-07 60.5 58 53.4
Gohir.A09G049900 Gossypium hirsutum HOM05D000072 ORTHO05D000026 2.2e-07 60.1 57 52.6
MD02G1274600 Malus domestica HOM05D000072 ORTHO05D000026 2.2e-07 60.1 83 42.2
Manes.04G046200 Manihot esculenta HOM05D000072 ORTHO05D000026 2.2e-07 60.1 57 50.9
Manes.04G046472 Manihot esculenta HOM05D000072 ORTHO05D000026 2.2e-07 60.1 57 50.9
Manes.04G046800 Manihot esculenta HOM05D000072 ORTHO05D000026 2.2e-07 60.1 57 50.9
Potri.015G018000 Populus trichocarpa HOM05D000072 ORTHO05D000026 2.2e-07 60.1 58 53.4
TAR629G3481 Trochodendron aralioides HOM05D000072 ORTHO05D000026 2.2e-07 60.1 57 52.6
CSS0004351 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 2.9e-07 59.7 62 45.2
Duzib114G0415 Durio zibethinus HOM05D000072 ORTHO05D000026 2.9e-07 59.7 57 56.1
QL09p010147 Quercus lobata HOM05D000072 ORTHO05D000026 2.9e-07 59.7 58 48.3
Rhsim03G0202700 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.9e-07 59.7 58 53.4
Rhsim03G0205000 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.9e-07 59.7 58 53.4
Rhsim06G0112600 Rhododendron simsii HOM05D000072 ORTHO05D000026 3.7e-07 59.3 58 50.0
CSS0028470 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 4.9e-07 58.9 58 48.3
Rhsim03G0205700 Rhododendron simsii HOM05D000072 ORTHO05D000026 4.9e-07 58.9 58 53.4
Thecc.03G042400 Theobroma cacao HOM05D000072 ORTHO05D000026 4.9e-07 58.9 57 49.1
TWI38G0481 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 4.9e-07 58.9 58 53.4
CiPaw.12G059200 Carya illinoinensis HOM05D000072 ORTHO05D000026 6.4e-07 58.5 57 54.4
QL09p010048 Quercus lobata HOM05D000072 ORTHO05D000026 6.4e-07 58.5 52 53.8
Rhsim03G0201600 Rhododendron simsii HOM05D000072 ORTHO05D000026 6.4e-07 58.5 58 53.4
Rhsim03G0203300 Rhododendron simsii HOM05D000072 ORTHO05D000026 6.4e-07 58.5 58 53.4
Rhsim06G0111700 Rhododendron simsii HOM05D000072 ORTHO05D000026 8.3e-07 58.2 58 50.0
TWI63G1102 Tripterygium wilfordii HOM05D000072 ORTHO05D000026 8.3e-07 58.2 58 53.4
CiPaw.05G255600 Carya illinoinensis HOM05D000072 ORTHO05D000026 1.1e-06 57.8 57 54.4
Dinv29299 Davidia involucrata HOM05D000072 ORTHO05D000717 1.1e-06 57.8 57 54.4
Gohir.A05G413800 Gossypium hirsutum HOM05D000072 ORTHO05D000026 1.1e-06 57.8 58 50.0
MD02G1273700 Malus domestica HOM05D000072 ORTHO05D000026 1.4e-06 57.4 129 31.0
QL09p009826 Quercus lobata HOM05D000072 ORTHO05D000026 1.4e-06 57.4 57 49.1
Rhsim06G0180000 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.4e-06 57.4 58 48.3
vmacro06551 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.4e-06 57.4 58 50.0
CSS0043145 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 1.9e-06 57.0 58 48.3
CiPaw.11G086600 Carya illinoinensis HOM05D000072 ORTHO05D000026 1.9e-06 57.0 58 55.2
Manes.11G117200 Manihot esculenta HOM05D000072 ORTHO05D000026 1.9e-06 57.0 58 46.6
Thecc.03G195300 Theobroma cacao HOM05D000072 ORTHO05D000026 1.9e-06 57.0 57 45.6
CSS0026632 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 2.4e-06 56.6 58 50.0
Gohir.D04G002240 Gossypium hirsutum HOM05D000072 ORTHO05D000026 2.4e-06 56.6 58 50.0
Prupe.2G047400 Prunus persica HOM05D000072 ORTHO05D000026 2.4e-06 56.6 83 41.0
CiPaw.11G058600 Carya illinoinensis HOM05D000072 ORTHO05D000026 3.2e-06 56.2 134 31.3
QL04p095571 Quercus lobata HOM05D000072 ORTHO05D000026 3.2e-06 56.2 58 50.0
QL04p095668 Quercus lobata HOM05D000072 ORTHO05D000026 3.2e-06 56.2 58 48.3
CiPaw.05G252300 Carya illinoinensis HOM05D000072 ORTHO05D000026 4.1e-06 55.8 58 50.0
CiPaw.05G252800 Carya illinoinensis HOM05D000072 ORTHO05D000026 4.1e-06 55.8 58 50.0
CiPaw.05G253100 Carya illinoinensis HOM05D000072 ORTHO05D000026 4.1e-06 55.8 58 50.0
CiPaw.05G253200 Carya illinoinensis HOM05D000072 ORTHO05D000026 4.1e-06 55.8 58 50.0
CiPaw.05G253700 Carya illinoinensis HOM05D000072 ORTHO05D000026 4.1e-06 55.8 58 50.0
CiPaw.05G253900 Carya illinoinensis HOM05D000072 ORTHO05D000026 4.1e-06 55.8 58 50.0
CiPaw.05G254300 Carya illinoinensis HOM05D000072 ORTHO05D000026 4.1e-06 55.8 58 50.0
Duzib114G0292 Durio zibethinus HOM05D000072 ORTHO05D000026 4.1e-06 55.8 57 52.6
Manes.04G075500 Manihot esculenta HOM05D000072 ORTHO05D000026 4.1e-06 55.8 57 54.4
Psat0s3957g0080 Pisum sativum HOM05D000072 ORTHO05D000026 4.1e-06 55.8 83 41.0
Potri.012G002800 Populus trichocarpa HOM05D000072 ORTHO05D000026 4.1e-06 55.8 58 53.4
Cpa.g.sc60.88 Carica papaya HOM05D000072 ORTHO05D000026 5.4e-06 55.5 58 51.7
CiPaw.05G252400 Carya illinoinensis HOM05D000072 ORTHO05D000026 5.4e-06 55.5 57 50.9
CiPaw.05G252600 Carya illinoinensis HOM05D000072 ORTHO05D000026 5.4e-06 55.5 58 50.0
CiPaw.05G253300 Carya illinoinensis HOM05D000072 ORTHO05D000026 5.4e-06 55.5 57 50.9
CiPaw.05G253500 Carya illinoinensis HOM05D000072 ORTHO05D000026 5.4e-06 55.5 58 50.0
CiPaw.05G254200 Carya illinoinensis HOM05D000072 ORTHO05D000026 5.4e-06 55.5 57 50.9
CiPaw.05G254600 Carya illinoinensis HOM05D000072 ORTHO05D000026 5.4e-06 55.5 57 50.9
CiPaw.05G255200 Carya illinoinensis HOM05D000072 ORTHO05D000026 5.4e-06 55.5 57 52.6
Gorai.012G003300 Gossypium raimondii HOM05D000072 ORTHO05D000026 5.4e-06 55.5 58 50.0
Rhsim03G0203600 Rhododendron simsii HOM05D000072 ORTHO05D000026 5.4e-06 55.5 57 45.6
Rhsim06G0112300 Rhododendron simsii HOM05D000072 ORTHO05D000026 5.4e-06 55.5 58 46.6
Rhsim06G0119300 Rhododendron simsii HOM05D000072 ORTHO05D000026 5.4e-06 55.5 58 50.0
Rhsim10G0165400 Rhododendron simsii HOM05D000072 ORTHO05D000026 5.4e-06 55.5 58 48.3
Thecc.03G041800 Theobroma cacao HOM05D000072 ORTHO05D000026 5.4e-06 55.5 57 47.4
CSS0001148 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 7.0e-06 55.1 57 49.1
CiPaw.05G254800 Carya illinoinensis HOM05D000072 ORTHO05D000026 7.0e-06 55.1 57 52.6
Lj3C361G6 Lonicera japonica HOM05D000072 ORTHO05D000026 7.0e-06 55.1 57 52.6
Potri.017G035500 Populus trichocarpa HOM05D000072 ORTHO05D000026 7.0e-06 55.1 87 37.9
QL07p000829 Quercus lobata HOM05D000072 ORTHO05D000026 9.2e-06 54.7 58 50.0
Rhsim03G0205900 Rhododendron simsii HOM05D000072 ORTHO05D000026 9.2e-06 54.7 76 42.1
Thecc.10G100000 Theobroma cacao HOM05D000072 ORTHO05D000026 9.2e-06 54.7 57 54.4


User provided reference genes

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