Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03730 Davidia involucrata HOM05D004688 ORTHO05D005490 1.2e-203 713.0 361 100.0
Dinv24334 Davidia involucrata HOM05D004688 ORTHO05D005490 5.5e-137 491.5 346 78.0
Hma1.2p1_0528F.1_g173050 Hydrangea macrophylla HOM05D004688 ORTHO05D005490 2.1e-128 463.0 343 74.9
RhsimUnG0132900 Rhododendron simsii HOM05D004688 ORTHO05D005490 2.7e-128 462.6 346 71.7
Actinidia20087 Actinidia chinensis HOM05D004688 ORTHO05D005490 5.9e-123 444.9 295 79.3
vmacro12865 Vaccinium macrocarpon HOM05D004688 ORTHO05D005490 1.0e-122 444.1 347 70.0
CiPaw.05G212300 Carya illinoinensis HOM05D004688 ORTHO05D005490 1.0e-119 434.1 295 78.3
QL09p020531 Quercus lobata HOM05D004688 ORTHO05D005490 1.4e-119 433.7 349 67.3
Cfa016079 Carpinus fangiana HOM05D004688 ORTHO05D005490 5.2e-119 431.8 343 67.9
Haze_00366 Corylus avellana HOM05D004688 ORTHO05D005490 6.8e-119 431.4 343 68.2
Manes.08G160300 Manihot esculenta HOM05D004688 ORTHO05D005490 1.2e-118 430.6 295 74.9
Atru.chr12.1856 Acer truncatum HOM05D004688 ORTHO05D005490 4.9e-117 425.2 370 62.7
COL.COLO4_15125 Corchorus olitorius HOM05D004688 ORTHO05D005490 1.8e-116 423.3 294 75.5
TAR629G2324 Trochodendron aralioides HOM05D004688 ORTHO05D005490 1.6e-115 420.2 361 64.3
Thecc.05G223200 Theobroma cacao HOM05D004688 ORTHO05D005490 1.7e-114 416.8 293 74.4
Oeu037809.1 Olea europaea HOM05D004688 ORTHO05D005490 5.6e-113 411.8 295 74.9
DCAR_030965 Daucus carota HOM05D004688 ORTHO05D005490 2.1e-112 409.8 293 74.4
Gohir.D13G162400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 2.1e-112 409.8 321 69.8
CiPaw.06G036300 Carya illinoinensis HOM05D004688 ORTHO05D005490 4.7e-112 408.7 301 72.4
FAN01G2619 Fragaria x ananassa HOM05D004688 ORTHO05D005490 4.7e-112 408.7 297 74.7
Duzib128G0049 Durio zibethinus HOM05D004688 ORTHO05D005490 8.0e-112 407.9 311 72.3
Gohir.A13G158100 Gossypium hirsutum HOM05D004688 ORTHO05D005490 1.4e-111 407.1 294 73.8
FvH4_7g34310 Fragaria vesca HOM05D004688 ORTHO05D005490 4.0e-111 405.6 297 74.4
Duzib177G0832 Durio zibethinus HOM05D004688 ORTHO05D005490 1.2e-110 404.1 301 72.1
FAN03G0573 Fragaria x ananassa HOM05D004688 ORTHO05D005490 1.2e-110 404.1 297 74.1
Potri.019G042700 Populus trichocarpa HOM05D004688 ORTHO05D005490 1.2e-110 404.1 343 65.3
Manes.09G130000 Manihot esculenta HOM05D004688 ORTHO05D005490 2.6e-110 402.9 298 71.8
Ciclev10032005m.g Citrus clementina HOM05D004688 ORTHO05D005490 4.4e-110 402.1 297 71.7
Potri.013G076900 Populus trichocarpa HOM05D004688 ORTHO05D005490 9.8e-110 401.0 343 65.3
Gohir.A02G114600 Gossypium hirsutum HOM05D004688 ORTHO05D005490 2.2e-109 399.8 294 71.8
Gorai.003G058400 Gossypium raimondii HOM05D004688 ORTHO05D005490 6.4e-109 398.3 294 72.4
Gorai.013G184500 Gossypium raimondii HOM05D004688 ORTHO05D005490 8.3e-109 397.9 298 72.1
Oeu047689.1 Olea europaea HOM05D004688 ORTHO05D005490 8.3e-109 397.9 295 72.9
SalBow1G7515 Salvia bowleyana HOM05D004688 ORTHO05D005490 1.4e-108 397.1 343 64.1
CSS0020442 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 5.4e-108 395.2 309 74.1
Gohir.D03G055600 Gossypium hirsutum HOM05D004688 ORTHO05D005490 5.4e-108 395.2 294 72.1
GSVIVG01024321001 Vitis vinifera HOM05D004688 ORTHO05D005490 7.0e-108 394.8 344 64.2
RcHm_v2.0_Chr1g0384701 Rosa chinensis HOM05D004688 ORTHO05D005490 1.6e-107 393.7 298 72.8
Gohir.A08G221644 Gossypium hirsutum HOM05D004688 ORTHO05D005490 6.0e-107 391.7 294 70.1
Cc04_g10300 Coffea canephora HOM05D004688 ORTHO05D005490 1.7e-106 390.2 295 72.2
Prupe.2G329400 Prunus persica HOM05D004688 ORTHO05D005490 3.9e-106 389.0 340 65.0
TAR636G2823 Trochodendron aralioides HOM05D004688 ORTHO05D005490 6.6e-106 388.3 347 63.1
Gohir.D08G240400 Gossypium hirsutum HOM05D004688 ORTHO05D005490 2.5e-105 386.3 294 69.4
Lj2A605T63 Lonicera japonica HOM05D004688 ORTHO05D005490 3.3e-105 386.0 402 58.0
ClCG09G013160 Citrullus lanatus HOM05D004688 ORTHO05D005490 1.2e-104 384.0 298 69.8
Migut.E01543 Erythranthe guttata HOM05D004688 ORTHO05D005490 2.1e-104 383.3 343 63.3
Gorai.004G255700 Gossypium raimondii HOM05D004688 ORTHO05D005490 6.2e-104 381.7 294 68.7
arahy.Tifrunner.gnm1.ann1.8TRX11 Arachis hypogaea HOM05D004688 ORTHO05D005490 1.1e-103 380.9 295 69.8
arahy.Tifrunner.gnm1.ann1.N6YK28 Arachis hypogaea HOM05D004688 ORTHO05D005490 1.4e-103 380.6 295 69.8
Oeu044132.1 Olea europaea HOM05D004688 ORTHO05D005490 1.4e-103 380.6 294 70.1
PGSC0003DMG400028677 Solanum tuberosum HOM05D004688 ORTHO05D005490 4.0e-103 379.0 295 68.8
Sed0002645 Sechium edule HOM05D004688 ORTHO05D005490 8.9e-103 377.9 297 68.4
CsaV3_6G036850 Cucumis sativus L. HOM05D004688 ORTHO05D005490 1.2e-102 377.5 297 67.3
Sed0013330 Sechium edule HOM05D004688 ORTHO05D005490 3.4e-102 375.9 297 67.3
MELO3C014341.2 Cucumis melo HOM05D004688 ORTHO05D005490 4.4e-102 375.6 297 67.3
Peaxi162Scf00012g01425 Petunia axillaris HOM05D004688 ORTHO05D005490 4.4e-102 375.6 296 68.9
SGA_v2.0_scaffold163G38052 Striga asiatica HOM05D004688 ORTHO05D005490 4.9e-101 372.1 299 68.9
Sopen11g001770 Solanum pennellii HOM05D004688 ORTHO05D005490 6.4e-101 371.7 296 68.2
Solyc11g005810.2 Solanum lycopersicum HOM05D004688 ORTHO05D005490 8.3e-101 371.3 296 68.2
Nn1g09153 Nelumbo nucifera HOM05D004688 ORTHO05D005490 1.9e-100 370.2 356 59.6
Aqoxy1G03166 Aquilegia oxysepala HOM05D004688 ORTHO05D005490 2.4e-100 369.8 296 67.6
TWI12G0369 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 3.2e-100 369.4 294 69.7
Sabra13G0065900 Salix brachista HOM05D004688 ORTHO05D005490 4.1e-100 369.0 360 58.9
MSTRG.14034 Avicennia marina HOM05D004688 ORTHO05D005490 1.6e-99 367.1 297 69.4
MSTRG.1666 Avicennia marina HOM05D004688 ORTHO05D005490 1.6e-99 367.1 296 67.2
Lj3g0005411 Lotus japonicus HOM05D004688 ORTHO05D005490 2.1e-99 366.7 295 69.5
Sabra19G0053300 Salix brachista HOM05D004688 ORTHO05D005490 4.6e-99 365.5 365 58.4
Eucgr.E02431 Eucalyptus grandis HOM05D004688 ORTHO05D005490 6.0e-99 365.2 295 68.8
FAN10G2489 Fragaria x ananassa HOM05D004688 ORTHO05D005490 1.7e-98 363.6 243 79.4
TWI18G0476 Tripterygium wilfordii HOM05D004688 ORTHO05D005490 2.3e-98 363.2 298 67.4
ECA236G0885 Erigeron canadensis HOM05D004688 ORTHO05D005490 1.5e-97 360.5 295 68.5
MD07G1032800 Malus domestica HOM05D004688 ORTHO05D005490 9.5e-97 357.8 297 68.0
CANSAT21G2449 Cannabis sativa HOM05D004688 ORTHO05D005490 2.1e-96 356.7 295 67.1
Glyma.12G014100 Glycine max HOM05D004688 ORTHO05D005490 2.8e-96 356.3 298 68.8
Lalb_Chr19g0140091 Lupinus albus HOM05D004688 ORTHO05D005490 8.1e-96 354.8 295 67.1
Actinidia06638 Actinidia chinensis HOM05D004688 ORTHO05D005490 1.4e-95 354.0 242 78.1
HanXRQChr04g0116531 Helianthus annuus HOM05D004688 ORTHO05D005490 5.2e-95 352.1 301 65.8
Glyma.09G222900 Glycine max HOM05D004688 ORTHO05D005490 1.5e-94 350.5 289 69.6
PSO782G0681 Papaver somniferum HOM05D004688 ORTHO05D005490 1.5e-94 350.5 297 64.3
TPR.G9830 Trifolium pratense HOM05D004688 ORTHO05D005490 3.4e-94 349.4 287 67.9
Nn3g21937 Nelumbo nucifera HOM05D004688 ORTHO05D005490 5.8e-94 348.6 367 56.4
PSO063G1904 Papaver somniferum HOM05D004688 ORTHO05D005490 5.8e-94 348.6 297 64.3
Ca_19600_v3 Cicer arietinum L. HOM05D004688 ORTHO05D005490 2.2e-93 346.7 295 67.1
Phvul.011G017000 Phaseolus vulgaris HOM05D004688 ORTHO05D005490 6.4e-93 345.1 277 70.4
VMungo1127G1418 Vigna mungo HOM05D004688 ORTHO05D005490 1.2e-91 340.9 300 66.0
THA.LOC104805719 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 2.7e-91 339.7 299 63.2
Lalb_Chr01g0000741 Lupinus albus HOM05D004688 ORTHO05D005490 1.3e-90 337.4 295 64.4
Medtr0004s0230 Medicago truncatula HOM05D004688 ORTHO05D005490 5.1e-90 335.5 300 65.0
MBI04_g30768_MAGBIO Magnolia biondii HOM05D004688 ORTHO05D005490 4.3e-89 332.4 300 60.0
Carub.0007s1324 Capsella rubella HOM05D004688 ORTHO05D005490 5.6e-89 332.0 301 62.8
Sp7g25560 Schrenkiella parvula HOM05D004688 ORTHO05D005490 7.3e-89 331.6 299 59.9
Nn4g25357 Nelumbo nucifera HOM05D004688 ORTHO05D005490 3.6e-88 329.3 299 60.9
Psat0s643g0040 Pisum sativum HOM05D004688 ORTHO05D005490 1.1e-87 327.8 291 64.9
Aa31LG5G12060 Aethionema arabicum HOM05D004688 ORTHO05D003121 1.4e-87 327.4 298 60.7
Lsat_1_v5_gn_7_27441 Lactuca sativa HOM05D005861 ORTHO05D007151 1.4e-87 327.4 283 67.1
MD01G1239500 Malus domestica HOM05D004688 ORTHO05D005490 4.0e-87 325.9 340 57.6
A03p57380 Brassica napus HOM05D004688 ORTHO05D005490 8.9e-87 324.7 298 59.1
BraA03t14804Z Brassica rapa HOM05D004688 ORTHO05D005490 8.9e-87 324.7 298 59.1
Lalb_Chr03g0024311 Lupinus albus HOM05D004688 ORTHO05D005490 1.2e-86 324.3 290 64.1
Nitab4.5_0000877g0060 Nicotiana tabacum HOM05D004688 ORTHO05D005490 2.6e-86 323.2 349 56.7
THA.LOC104823796 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 3.4e-86 322.8 304 62.2
Sc07g0001340 Simmondsia chinensis HOM05D004688 ORTHO05D005490 7.6e-86 321.6 296 60.5
Thhalv10025651m.g Eutrema salsugineum HOM05D004688 ORTHO05D005490 1.7e-85 320.5 300 60.7
AL7G25110 Arabidopsis lyrata HOM05D004688 ORTHO05D005490 2.9e-85 319.7 304 60.2
CARHR235310 Cardamine hirsuta HOM05D004688 ORTHO05D005490 2.9e-85 319.7 300 61.3
CDE02G1754 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 2.9e-85 319.7 301 59.8
CSS0035319 Camellia sinensis var. sinensis HOM05D004688 ORTHO05D005490 1.1e-84 317.8 213 81.2
THA.LOC104821693 Tarenaya hassleriana HOM05D004688 ORTHO05D005490 3.2e-84 316.2 301 60.8
BcaNung01654 Brassica carinata HOM05D004688 ORTHO05D005490 1.2e-83 314.3 289 59.2
BolC7t46040H Brassica oleracea HOM05D004688 ORTHO05D005490 1.6e-83 313.9 297 59.3
CDE11G1120 Ceratophyllum demersum HOM05D004688 ORTHO05D005490 4.6e-83 312.4 300 57.3
EL10Ac6g14347 Beta vulgaris HOM05D004688 ORTHO05D005490 6.0e-83 312.0 295 59.3
Sp7g25570 Schrenkiella parvula HOM05D004688 ORTHO05D005490 1.0e-82 311.2 299 58.5
C07p55600 Brassica napus HOM05D004688 ORTHO05D005490 2.3e-82 310.1 289 59.9
AT4G27620 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 3.0e-82 309.7 300 58.7
Thhalv10025690m.g Eutrema salsugineum HOM05D004688 ORTHO05D005490 1.5e-81 307.4 295 58.6
HanXRQChr15g0482031 Helianthus annuus HOM05D004688 ORTHO05D005490 2.5e-81 306.6 304 57.9
AT4G27610 Arabidopsis thaliana HOM05D004688 ORTHO05D005490 4.3e-81 305.8 300 59.3
Carub.0007s1323 Capsella rubella HOM05D004688 ORTHO05D005490 4.3e-81 305.8 290 59.7
AUR62002842 Chenopodium quinoa HOM05D004688 ORTHO05D005490 7.3e-81 305.1 304 56.6
CARHR235320 Cardamine hirsuta HOM05D004688 ORTHO05D005490 9.6e-81 304.7 300 58.0
Duzib106G1350 Durio zibethinus HOM05D004688 ORTHO05D005490 3.6e-80 302.8 229 68.6
A01p18910 Brassica napus HOM05D004688 ORTHO05D005490 1.1e-79 301.2 294 59.9
BraA01t01832Z Brassica rapa HOM05D004688 ORTHO05D005490 1.4e-79 300.8 294 59.9
BraA01t01828Z Brassica rapa HOM05D004688 ORTHO05D005490 5.3e-79 298.9 296 56.4
BcaC09g50575 Brassica carinata HOM05D004688 ORTHO05D005490 9.0e-79 298.1 297 56.2
BcaC06g32678 Brassica carinata HOM05D004688 ORTHO05D005490 1.2e-78 297.7 295 58.0
BcaC09g50567 Brassica carinata HOM05D004688 ORTHO05D005490 1.5e-78 297.4 294 57.5
BolC1t02331H Brassica oleracea HOM05D004688 ORTHO05D005490 1.5e-78 297.4 294 57.5
C01p23780 Brassica napus HOM05D004688 ORTHO05D005490 2.0e-78 297.0 297 56.9
BcaNung01652 Brassica carinata HOM05D004688 ORTHO05D005490 3.4e-78 296.2 296 58.1
A01p18850 Brassica napus HOM05D004688 ORTHO05D005490 4.5e-78 295.8 288 57.3
BolC1t02329H Brassica oleracea HOM05D004688 ORTHO05D005490 5.8e-78 295.4 289 57.8
Os02g0582200 Oryza sativa ssp. japonica HOM05D004688 ORTHO05D005490 5.8e-78 295.4 304 56.6
C01p23860 Brassica napus HOM05D004688 ORTHO05D005490 1.4e-76 290.8 294 58.2
Zm00001eb183340 Zea mays HOM05D004688 ORTHO05D005490 3.2e-76 289.7 301 54.2
AUR62037307 Chenopodium quinoa HOM05D004688 ORTHO05D005490 2.7e-75 286.6 366 48.4
Ah.03g138260 Amaranthus hybridus HOM05D004688 ORTHO05D005490 7.9e-75 285.0 295 54.6
PGR142G2085 Punica granatum HOM05D004688 ORTHO05D005490 2.3e-74 283.5 296 60.1
Zm00001eb245400 Zea mays HOM05D004688 ORTHO05D005490 1.4e-71 274.2 310 52.9
Ah.02g127670 Amaranthus hybridus HOM05D004688 ORTHO05D005490 1.2e-70 271.2 291 54.6
AL7G25100 Arabidopsis lyrata HOM05D004688 ORTHO05D005490 8.7e-66 255.0 208 67.8
Migut.A00176 Erythranthe guttata HOM05D004688 ORTHO05D005490 4.2e-60 236.1 309 52.4
unitig_578.g16583 Utricularia gibba HOM05D004688 ORTHO05D005490 6.3e-56 222.2 206 60.7
ATR0829G074 Amborella trichopoda HOM05D004688 ORTHO05D005490 1.1e-47 194.9 311 44.7
Nitab4.5_0000805g0040 Nicotiana tabacum HOM05D004688 ORTHO05D005490 4.2e-44 183.0 347 37.8
BcaC06g32679 Brassica carinata HOM05D006163 ORTHO05D007625 2.6e-41 173.7 288 41.3
unitig_8.g5064 Utricularia gibba HOM05D004688 ORTHO05D005490 8.8e-34 148.7 155 58.7
SEGI_37617 Sequoiadendron giganteum HOM05D004688 ORTHO05D005490 4.2e-28 129.8 336 35.7
HPP92_022761 Vanilla planifolia HOM05D004688 ORTHO05D005490 3.0e-26 123.6 132 53.0
HPP92_004940 Vanilla planifolia HOM05D004688 ORTHO05D005490 4.8e-24 116.3 156 48.1
SGA_v2.0_scaffold249G44960 Striga asiatica HOM05D004688 ORTHO05D005490 1.7e-21 107.8 103 59.2
Oeu004249.1 Olea europaea HOM05D004688 ORTHO05D005490 1.1e-15 88.6 72 68.1
SMO367G0918 Selaginella moellendorffii HOM05D004688 ORTHO05D005490 5.2e-10 69.7 186 31.2
HPP92_004939 Vanilla planifolia HOM05D004688 ORTHO05D005490 4.9e-08 63.2 125 34.4
Mapoly0010s0074 Marchantia polymorpha HOM05D017133 ORTHO05D005490 8.3e-08 62.4 181 30.4
Peaxi162Scf00120g01119 Petunia axillaris HOM05D002883 ORTHO05D003116 1.1e-07 62.0 42 78.6


User provided reference genes

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