Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 2.1e-94 349.0 174 100.0
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 3.2e-58 228.8 141 78.0
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 1.5e-55 219.9 133 78.2
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 6.3e-54 214.5 153 66.0
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 8.2e-54 214.2 153 66.7
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 1.1e-53 213.8 142 71.1
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 1.4e-53 213.4 150 66.7
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 1.8e-53 213.0 153 66.0
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 1.5e-52 209.9 145 71.7
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 2.6e-52 209.1 153 66.7
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 4.5e-52 208.4 141 68.1
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 4.5e-52 208.4 150 64.7
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 5.9e-52 208.0 153 66.7
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 5.9e-52 208.0 153 66.0
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 1.0e-51 207.2 150 66.7
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 1.0e-51 207.2 149 65.8
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 1.3e-51 206.8 149 65.1
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.3e-51 206.8 148 68.2
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.9e-50 203.0 125 73.6
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 1.9e-50 203.0 149 65.1
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 2.5e-50 202.6 125 77.6
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 4.2e-50 201.8 155 64.5
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 5.5e-50 201.4 130 73.1
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 1.2e-49 200.3 149 61.7
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 1.6e-49 199.9 146 62.3
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 2.1e-49 199.5 125 72.0
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 2.7e-49 199.1 118 75.4
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 2.7e-49 199.1 118 75.4
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 3.6e-49 198.7 124 73.4
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 3.6e-49 198.7 124 75.8
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 3.6e-49 198.7 134 67.2
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 3.6e-49 198.7 149 62.4
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 4.7e-49 198.4 118 76.3
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 6.1e-49 198.0 124 73.4
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 6.1e-49 198.0 145 66.9
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 6.1e-49 198.0 142 64.8
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 6.1e-49 198.0 153 61.4
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 6.1e-49 198.0 136 69.9
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 1.0e-48 197.2 117 76.1
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.4e-48 196.8 122 76.2
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.8e-48 196.4 126 71.4
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 2.3e-48 196.1 118 72.9
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 3.0e-48 195.7 145 66.2
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 3.9e-48 195.3 145 66.2
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 3.9e-48 195.3 149 63.1
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 6.7e-48 194.5 118 76.3
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 8.8e-48 194.1 150 62.7
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 8.8e-48 194.1 137 68.6
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.1e-47 193.7 126 70.6
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.5e-47 193.4 118 72.0
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 2.0e-47 193.0 147 57.8
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 2.0e-47 193.0 150 63.3
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 4.4e-47 191.8 145 64.1
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 7.4e-47 191.0 131 67.9
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 7.4e-47 191.0 131 67.9
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 9.7e-47 190.7 118 72.0
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 9.7e-47 190.7 149 60.4
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.3e-46 190.3 129 69.0
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 1.7e-46 189.9 147 57.8
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 2.2e-46 189.5 146 59.6
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 3.7e-46 188.7 123 69.9
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 3.7e-46 188.7 125 70.4
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 3.7e-46 188.7 128 68.0
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 4.8e-46 188.3 131 69.5
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 6.3e-46 188.0 157 61.1
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.4e-45 186.0 148 59.5
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 5.3e-45 184.9 109 78.0
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 5.3e-45 184.9 123 68.3
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 8.5e-43 177.6 112 69.6
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.5e-42 176.8 124 65.3
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 6.1e-41 171.4 95 77.9
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 8.0e-41 171.0 121 63.6
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.4e-40 170.2 120 60.0
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 1.7e-38 163.3 123 61.0
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 5.9e-36 154.8 118 59.3
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 2.9e-35 152.5 142 50.7
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 1.2e-33 147.1 115 60.0
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 3.6e-33 145.6 100 71.0
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 3.6e-33 145.6 124 54.8
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 8.0e-33 144.4 144 55.6
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 1.4e-32 143.7 111 63.1
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 6.8e-32 141.4 80 82.5
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 4.8e-30 135.2 89 68.5
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 2.1e-25 119.8 74 75.7
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.0e-19 100.9 88 56.8
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 5.6e-18 95.1 74 64.9
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 6.1e-17 91.7 50 76.0
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 3.0e-16 89.4 55 65.5
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 1.2e-09 67.4 110 35.5


User provided reference genes

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