Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031408 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-145 518.8 249 100.0
DCAR_031399 Daucus carota HOM05D002492 ORTHO05D002621 9.4e-120 433.7 247 82.2
DCAR_031854 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-82 309.7 222 66.7
DCAR_028510 Daucus carota HOM05D002492 ORTHO05D002621 8.1e-79 297.7 172 83.1
DCAR_031412 Daucus carota HOM05D002492 ORTHO05D002621 7.1e-59 231.5 214 49.5
DCAR_031407 Daucus carota HOM05D002492 ORTHO05D002621 8.1e-55 218.0 212 50.0
DCAR_017537 Daucus carota HOM05D022071 ORTHO05D002621 2.0e-53 213.4 180 60.6
DCAR_031404 Daucus carota HOM05D002492 ORTHO05D002621 9.3e-51 204.5 242 41.3
DCAR_031400 Daucus carota HOM05D000106 ORTHO05D002621 2.4e-46 189.9 230 41.3
DCAR_017541 Daucus carota HOM05D002492 ORTHO05D002621 9.0e-46 188.0 234 40.6
DCAR_031396 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-45 186.4 234 40.6
DCAR_028507 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-44 182.6 231 40.7
DCAR_017538 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-42 176.4 199 43.2
DCAR_010634 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-36 155.6 228 36.8
DCAR_028512 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-35 154.5 215 39.1
DCAR_031397 Daucus carota HOM05D002492 ORTHO05D002621 6.1e-34 148.7 171 41.5
DCAR_017539 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-33 147.9 171 40.9
DCAR_028508 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-33 147.1 129 51.9
DCAR_017540 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-33 146.7 231 35.1
DCAR_031409 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-32 142.9 171 40.9
DCAR_031398 Daucus carota HOM05D002492 ORTHO05D002621 4.3e-32 142.5 205 34.1
DCAR_020330 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-31 140.6 216 36.1
DCAR_005612 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-31 140.2 227 36.6
DCAR_010630 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-31 139.8 226 35.0
DCAR_031855 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-31 138.7 244 33.6
DCAR_017278 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-30 136.7 229 34.1
DCAR_002614 Daucus carota HOM05D002492 ORTHO05D002621 6.9e-30 135.2 215 32.1
DCAR_010474 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-29 134.4 215 33.5
DCAR_031642 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-29 133.3 230 31.3
DCAR_024224 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-29 132.1 215 34.0
DCAR_024285 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-29 132.1 215 32.1
DCAR_017018 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-28 131.3 215 33.5
DCAR_027466 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-28 128.3 205 34.6
DCAR_017468 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-27 127.9 229 32.8
DCAR_001053 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-27 127.5 215 32.1
DCAR_017879 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-27 126.3 227 31.3
DCAR_022677 Daucus carota HOM05D002492 ORTHO05D002621 9.4e-27 124.8 220 32.7
DCAR_031411 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-25 121.3 241 30.7
DCAR_031756 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-25 120.9 201 31.8
DCAR_028491 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-25 120.2 222 31.5
DCAR_018000 Daucus carota HOM05D002492 ORTHO05D002621 8.8e-25 118.2 223 31.8
DCAR_027468 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-24 117.5 230 30.4
DCAR_021161 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-23 112.1 205 31.2
DCAR_029452 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-22 110.5 215 32.6
DCAR_031392 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-22 109.8 237 32.9
DCAR_026146 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-21 106.7 227 27.8
DCAR_011402 Daucus carota HOM05D002492 ORTHO05D002621 7.7e-21 105.1 192 32.8
DCAR_011193 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-20 104.8 208 29.3
DCAR_031757 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-20 104.8 184 31.5
DCAR_027578 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-20 104.0 215 29.3
DCAR_019328 Daucus carota HOM05D005446 ORTHO05D006597 2.2e-20 103.6 193 31.6
DCAR_017458 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-20 102.8 186 32.3
DCAR_024328 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-20 102.8 222 26.1
DCAR_030199 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-20 102.8 219 27.9
DCAR_008877 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-20 102.1 217 30.0
DCAR_022721 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-20 102.1 233 28.8
DCAR_015930 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-20 101.7 215 29.3
DCAR_028506 Daucus carota HOM05D002492 ORTHO05D002621 4.2e-19 99.4 103 46.6
DCAR_005616 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-18 97.8 216 25.9
DCAR_028337 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-18 97.8 190 32.1
DCAR_024355 Daucus carota HOM05D002492 ORTHO05D002621 4.7e-18 95.9 221 24.4
DCAR_028338 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-18 95.1 216 25.9
DCAR_023749 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-17 94.0 215 25.6
DCAR_010788 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-17 93.6 153 31.4
DCAR_020839 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-17 93.6 240 26.2
DCAR_001054 Daucus carota HOM05D002492 ORTHO05D002621 3.9e-17 92.8 224 29.5
DCAR_017878 Daucus carota HOM05D002492 ORTHO05D002621 6.7e-17 92.0 222 25.7
DCAR_025599 Daucus carota HOM05D002492 ORTHO05D002621 6.7e-17 92.0 227 26.0
DCAR_024352 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-16 91.3 155 29.0
DCAR_031459 Daucus carota HOM05D002492 ORTHO05D002621 3.3e-16 89.7 220 25.9
DCAR_005968 Daucus carota HOM05D002492 ORTHO05D002621 4.4e-16 89.4 189 27.5
DCAR_017280 Daucus carota HOM05D002492 ORTHO05D002621 4.4e-16 89.4 230 26.1
DCAR_020287 Daucus carota HOM05D002492 ORTHO05D002621 4.4e-16 89.4 189 27.5
DCAR_021065 Daucus carota HOM05D002492 ORTHO05D002621 4.4e-16 89.4 189 27.5
DCAR_017735 Daucus carota HOM05D002492 ORTHO05D002621 9.7e-16 88.2 225 26.2
DCAR_031312 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-15 87.8 195 31.3
DCAR_010631 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-15 87.4 227 26.9
DCAR_031501 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-15 87.0 221 26.2
DCAR_016042 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-15 86.7 211 27.5
DCAR_022644 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-15 86.7 206 31.1
DCAR_029815 Daucus carota HOM05D002492 ORTHO05D002621 4.8e-15 85.9 235 25.5
DCAR_024354 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-15 85.5 223 25.6
DCAR_017267 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-14 84.0 166 33.7
DCAR_017737 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-14 83.6 212 28.3
DCAR_029614 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-14 83.2 132 37.1
DCAR_001183 Daucus carota HOM05D002492 ORTHO05D002621 5.3e-14 82.4 188 29.3
DCAR_001591 Daucus carota HOM05D002492 ORTHO05D002621 7.0e-14 82.0 188 28.2
DCAR_015811 Daucus carota HOM05D002492 ORTHO05D002621 7.0e-14 82.0 216 26.4
DCAR_026108 Daucus carota HOM05D002492 ORTHO05D002621 9.1e-14 81.6 170 31.2
DCAR_015810 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-13 80.9 149 28.2
DCAR_017482 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-13 80.9 113 38.9
DCAR_021053 Daucus carota HOM05D002492 ORTHO05D002621 3.5e-13 79.7 222 28.4
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 1.3e-12 77.8 226 27.9
DCAR_026397 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-12 77.0 215 26.0
DCAR_007165 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-12 76.6 214 25.7
DCAR_030129 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-12 76.6 127 29.9
DCAR_024728 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-12 76.3 237 27.8
DCAR_031458 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-12 75.9 195 28.2
DCAR_018623 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-12 75.1 167 27.5
DCAR_031904 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-12 75.1 167 27.5
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-11 74.7 237 27.8
DCAR_005544 Daucus carota HOM05D002492 ORTHO05D002621 9.4e-11 71.6 124 29.8
DCAR_030958 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-10 71.2 91 40.7
DCAR_010812 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-10 70.9 243 25.1
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 2.7e-10 70.1 231 27.3
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.7e-10 70.1 231 27.3
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 2.7e-10 70.1 231 27.3
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 2.7e-10 70.1 231 27.3
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.7e-10 70.1 231 27.3
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 2.7e-10 70.1 231 27.3
DCAR_016062 Daucus carota HOM05D002492 ORTHO05D002621 2.7e-10 70.1 239 26.4
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 3.6e-10 69.7 218 24.3
DCAR_017429 Daucus carota HOM05D002492 ORTHO05D002621 4.7e-10 69.3 184 25.0
TWI31G0819 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 6.1e-10 68.9 235 25.1
DCAR_010020 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-10 68.6 221 22.6
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 8.0e-10 68.6 218 22.9
DCAR_031414 Daucus carota HOM05D002492 ORTHO05D002621 8.0e-10 68.6 157 28.7
TWI38G1001 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.0e-09 68.2 223 26.5
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 1.4e-09 67.8 224 25.0
DCAR_022741 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-09 67.4 156 24.4
DCAR_029847 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-09 67.4 99 37.4
TWI39G0063 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.8e-09 67.4 224 24.6
DCAR_029616 Daucus carota HOM05D002492 ORTHO05D002621 2.3e-09 67.0 187 24.6
Aqoxy3G01099 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 4.0e-09 66.2 226 26.1
TWI60G0328 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 4.0e-09 66.2 237 24.1
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 5.2e-09 65.9 216 24.1
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.2e-09 65.9 235 26.8
DCAR_010336 Daucus carota HOM05D002492 ORTHO05D002621 8.8e-09 65.1 231 23.8
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 1.5e-08 64.3 227 26.9
DCAR_021052 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-08 63.9 98 31.6
DCAR_029961 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-08 63.9 216 24.5
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 3.3e-08 63.2 212 24.5
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 5.7e-08 62.4 221 21.7
DCAR_021272 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-07 61.2 188 25.5
DCAR_029962 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-07 61.2 142 28.9
DCAR_009543 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-07 60.5 79 31.6
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 2.8e-07 60.1 175 23.4
DCAR_031418 Daucus carota HOM05D002492 ORTHO05D002621 2.8e-07 60.1 125 35.2
BcaC08g44543 Brassica carinata HOM05D000353 ORTHO05D000174 3.7e-07 59.7 175 22.9
DCAR_024102 Daucus carota HOM05D002492 ORTHO05D002621 4.8e-07 59.3 113 32.7
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 4.8e-07 59.3 147 28.6
DCAR_016041 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-07 58.9 105 32.4
DCAR_024921 Daucus carota HOM05D002492 ORTHO05D002621 8.2e-07 58.5 234 23.9
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-06 58.2 175 23.4
DCAR_017251 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-06 57.8 186 24.2
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.4e-06 57.8 204 23.5
BcaC01g00912 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-06 57.0 169 22.5
DCAR_028495 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-06 57.0 118 35.6
Peaxi162Scf00115g00007 Petunia axillaris HOM05D002907 ORTHO05D000065 2.4e-06 57.0 79 38.0
arahy.Tifrunner.gnm1.ann1.VX4W4R Arachis hypogaea HOM05D008664 ORTHO05D000174 3.1e-06 56.6 219 22.4
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 3.1e-06 56.6 230 20.9
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.1e-06 56.6 86 37.2
BraA09t38529Z Brassica rapa HOM05D000313 ORTHO05D000065 5.3e-06 55.8 217 23.0
DCAR_020328 Daucus carota HOM05D002492 ORTHO05D002621 5.3e-06 55.8 215 21.9
arahy.Tifrunner.gnm1.ann1.7R55CH Arachis hypogaea HOM05D008664 ORTHO05D000174 7.0e-06 55.5 227 22.0
COL.COLO4_31360 Corchorus olitorius HOM05D007876 ORTHO05D007430 9.1e-06 55.1 215 22.8


User provided reference genes

Program Settings