Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 0.0e+00 1634.0 929 100.0
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 0.0e+00 1399.4 924 87.1
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 1.3e-65 255.8 705 37.9
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 1.4e-59 235.7 704 38.1
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 1.8e-59 235.3 473 44.4
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 4.1e-59 234.2 926 31.0
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 7.0e-59 233.4 1040 31.8
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 2.7e-58 231.5 928 32.7
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 3.5e-58 231.1 952 31.4
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.3e-52 212.6 973 32.8
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 3.7e-52 211.1 741 37.0
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 9.1e-51 206.5 842 34.7
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 2.0e-45 188.7 934 30.7
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 6.3e-44 183.7 953 31.8
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 6.3e-44 183.7 941 30.1
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 2.4e-43 181.8 924 31.1
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 7.0e-43 180.3 774 33.6
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 6.6e-41 173.7 756 32.7
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 6.6e-41 173.7 947 30.8
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 8.6e-41 173.3 694 33.4
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 1.6e-39 169.1 562 34.7
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 1.4e-38 166.0 978 30.1
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 1.5e-37 162.5 745 33.0
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 1.4e-35 156.0 909 28.7
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 5.4e-35 154.1 935 27.6
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 5.4e-35 154.1 1025 29.0
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 9.2e-35 153.3 804 30.5
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 1.2e-34 152.9 561 33.9
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 2.7e-34 151.8 913 28.5
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 4.6e-34 151.0 720 32.1
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 3.9e-33 147.9 539 35.8
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 5.0e-33 147.5 550 36.4
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 6.6e-33 147.1 760 30.9
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 7.3e-32 143.7 765 31.8
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 1.6e-31 142.5 994 28.0
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 8.0e-31 140.2 514 37.2
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.1e-30 139.8 703 30.6
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 1.4e-30 139.4 756 31.1
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 1.8e-30 139.0 514 34.0
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 2.6e-29 135.2 788 31.5
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 4.4e-29 134.4 510 36.1
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 1.3e-28 132.9 490 35.3
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 8.3e-28 130.2 539 34.3
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.9e-27 129.0 766 30.3
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 3.2e-27 128.3 727 30.8
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 4.1e-27 127.9 326 34.7
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 1.2e-26 126.3 499 33.9
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 1.6e-26 125.9 508 31.7
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 2.7e-26 125.2 595 34.5
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 4.6e-26 124.4 767 30.2
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 4.6e-26 124.4 331 41.1
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 6.0e-26 124.0 990 27.6
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 6.0e-26 124.0 728 29.1
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 1.0e-25 123.2 360 38.9
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 1.0e-25 123.2 483 35.2
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 1.3e-25 122.9 505 35.2
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.3e-25 122.9 667 32.1
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 1.3e-25 122.9 592 29.6
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 3.0e-25 121.7 922 26.7
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 3.9e-25 121.3 266 39.1
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 1.1e-24 119.8 450 35.1
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 4.3e-24 117.9 415 32.5
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 5.6e-24 117.5 359 38.7
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 5.6e-24 117.5 373 37.5
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 3.6e-23 114.8 514 32.7
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 6.2e-23 114.0 512 30.7
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 1.8e-22 112.5 485 33.8
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 2.3e-22 112.1 230 47.0
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 3.1e-22 111.7 887 29.0
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 6.8e-22 110.5 381 32.3
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 6.8e-22 110.5 350 38.3
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 4.4e-21 107.8 471 32.7
CSS0016721 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 4.4e-21 107.8 390 33.8
CSS0038644 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 4.4e-21 107.8 390 33.8
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 5.8e-21 107.5 711 28.8
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 9.9e-21 106.7 272 33.8
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 1.3e-20 106.3 949 25.9
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 2.2e-20 105.5 548 29.0
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 2.2e-20 105.5 345 33.0
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.2e-20 105.5 815 26.4
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 2.9e-20 105.1 357 32.8
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 4.9e-20 104.4 294 39.1
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 1.9e-19 102.4 221 49.3
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 4.1e-19 101.3 863 29.0
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 7.1e-19 100.5 444 31.3
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 9.2e-19 100.1 380 38.7
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 1.2e-18 99.8 583 28.6
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 1.6e-18 99.4 177 50.3
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 2.1e-18 99.0 385 29.9
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 2.7e-18 98.6 572 32.3
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 3.5e-18 98.2 592 31.4
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 1.0e-17 96.7 338 33.1
CSS0027095 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 1.3e-17 96.3 386 31.9
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 3.9e-17 94.7 416 31.2
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 6.6e-17 94.0 397 35.5
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 6.6e-17 94.0 765 28.9
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 6.6e-17 94.0 1064 26.4
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 2.5e-16 92.0 535 33.1
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 3.3e-16 91.7 839 27.4
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 3.3e-16 91.7 112 52.7
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 8.1e-15 87.0 76 60.5
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 8.1e-15 87.0 408 31.1
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 8.1e-15 87.0 408 31.1
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 8.1e-15 87.0 408 31.1
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 3.1e-14 85.1 62 62.9
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 6.8e-14 84.0 564 26.6
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 2.0e-13 82.4 101 62.4
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 4.4e-13 81.3 222 38.3
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 4.4e-13 81.3 470 29.4
Zm00001eb160100 Zea mays HOM05D006920 ORTHO05D005895 2.2e-12 79.0 210 44.8
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 4.9e-12 77.8 60 61.7
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 2.1e-10 72.4 817 24.5
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 2.1e-10 72.4 219 41.1
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 2.7e-10 72.0 58 53.4
Aa31LG11G5940 Aethionema arabicum HOM05D010535 ORTHO05D005895 3.5e-10 71.6 125 36.8
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 7.8e-10 70.5 602 28.2
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 5.1e-09 67.8 118 50.8
Hma1.2p1_1540F.1_g289660 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 8.7e-09 67.0 170 40.0
A10p14250 Brassica napus HOM05D010535 ORTHO05D005895 1.1e-08 66.6 51 64.7
BraA10t43516Z Brassica rapa HOM05D010535 ORTHO05D005895 1.1e-08 66.6 51 64.7
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 1.1e-06 60.1 194 37.6
AUR62029046 Chenopodium quinoa HOM05D036879 ORTHO05D005895 2.4e-06 58.9 331 29.6
Glyma.18G092000 Glycine max HOM05D006920 ORTHO05D005895 2.4e-06 58.9 184 29.9
AL52U10020 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 6.9e-06 57.4 347 26.2


User provided reference genes

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