Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 2.5e-308 1061.2 526 100.0
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 2.5e-186 656.0 542 61.8
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 4.8e-182 641.7 535 60.9
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 3.8e-179 632.1 438 67.1
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 8.8e-176 620.9 486 61.5
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 1.1e-173 614.0 516 59.1
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 2.4e-173 612.8 514 59.9
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 1.6e-172 610.1 543 58.4
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 2.6e-172 609.4 525 57.5
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 4.5e-172 608.6 464 62.1
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 5.0e-171 605.1 507 60.6
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 8.5e-171 604.4 519 58.6
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 1.1e-170 604.0 517 59.8
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 1.9e-170 603.2 518 56.8
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 1.9e-170 603.2 498 60.4
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 7.2e-170 601.3 518 56.9
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 9.4e-170 600.9 490 59.6
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.2e-169 600.5 490 59.8
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 1.0e-168 597.4 423 65.0
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 3.0e-168 595.9 455 62.4
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 4.0e-168 595.5 415 66.3
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 6.8e-168 594.7 492 58.5
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.6e-167 592.8 519 58.2
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 2.8e-166 589.3 498 58.4
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 3.7e-166 589.0 514 55.6
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 4.8e-166 588.6 437 62.5
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 6.3e-166 588.2 460 61.1
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 1.1e-165 587.4 475 59.4
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 3.1e-165 585.9 472 60.0
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 1.6e-164 583.6 534 55.4
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 1.6e-164 583.6 430 64.2
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 2.0e-164 583.2 416 65.6
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 2.7e-164 582.8 508 57.3
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 4.5e-164 582.0 482 59.8
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 1.3e-163 580.5 476 58.2
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 2.2e-163 579.7 482 59.1
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 2.9e-163 579.3 520 57.3
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 1.9e-162 576.6 415 64.1
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 3.2e-162 575.9 491 58.7
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.2e-161 573.9 533 55.9
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 6.1e-161 571.6 454 59.0
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 1.8e-160 570.1 421 64.4
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 3.0e-160 569.3 465 59.8
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.6e-159 566.2 520 54.0
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 7.5e-159 564.7 405 63.7
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.7e-158 563.5 433 61.2
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 1.7e-158 563.5 425 61.6
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 2.2e-158 563.1 438 61.0
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 2.2e-158 563.1 529 53.1
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.8e-158 562.8 520 53.7
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 2.8e-158 562.8 470 58.1
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 6.3e-158 561.6 502 56.4
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 1.1e-157 560.8 490 58.6
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.4e-157 560.5 481 58.0
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 1.8e-157 560.1 506 56.3
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 5.4e-157 558.5 502 54.2
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 1.2e-156 557.4 530 54.5
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 7.7e-156 554.7 520 54.8
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 1.3e-155 553.9 525 53.1
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 2.3e-155 553.1 470 57.2
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 8.6e-155 551.2 482 56.8
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 1.9e-154 550.1 405 63.2
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 3.3e-154 549.3 496 53.8
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 7.2e-154 548.1 419 61.8
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 7.5e-151 538.1 476 57.8
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 9.8e-151 537.7 474 57.2
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 1.1e-149 534.3 414 58.7
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 3.2e-149 532.7 470 56.0
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 1.6e-148 530.4 474 56.1
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 2.7e-148 529.6 470 56.8
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 5.9e-148 528.5 470 56.4
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 2.9e-147 526.2 401 62.1
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 6.6e-147 525.0 486 55.8
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 1.9e-146 523.5 475 55.8
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 3.3e-146 522.7 475 55.8
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 9.5e-146 521.2 475 55.6
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 8.0e-145 518.1 470 56.2
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 1.8e-144 516.9 394 61.4
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 5.2e-144 515.4 573 49.2
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 9.2e-141 504.6 431 54.5
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 3.6e-137 492.7 446 56.3
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 4.1e-133 479.2 362 58.3
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 8.9e-128 461.5 295 73.6
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 5.1e-123 445.7 460 45.9
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 1.4e-120 437.6 290 67.9
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 3.1e-120 436.4 290 67.2
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 4.4e-119 432.6 384 52.6
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 4.2e-117 426.0 386 52.1
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 2.1e-113 413.7 367 51.8
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 1.2e-108 397.9 294 65.0
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 6.0e-108 395.6 305 60.7
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 1.0e-107 394.8 487 44.6
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 1.4e-104 384.4 279 62.7
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.8e-99 367.5 432 44.9
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.4e-96 357.8 265 65.3
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 1.8e-96 357.5 234 68.8
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 5.8e-95 352.4 358 48.3
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 1.0e-94 351.7 389 45.0
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.1e-93 348.2 455 41.3
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 3.5e-92 343.2 227 68.7
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 3.5e-92 343.2 217 70.0
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.7e-86 324.3 250 64.4
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 3.6e-68 263.5 535 33.8
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 4.0e-59 233.4 166 65.7
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 1.1e-58 231.9 287 45.3
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 5.9e-55 219.5 351 35.6
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.9e-45 188.0 283 35.0
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 1.7e-38 164.9 517 25.5
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 2.9e-38 164.1 402 30.1
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 8.6e-38 162.5 227 41.0
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 1.1e-37 162.2 111 65.8
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 7.3e-37 159.5 217 44.2
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 7.3e-37 159.5 208 43.3
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 9.5e-37 159.1 246 40.2
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 4.1e-32 143.7 203 41.9
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 9.2e-32 142.5 107 62.6
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 6.8e-27 126.3 91 64.8
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 6.8e-27 126.3 151 42.4
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 2.6e-26 124.4 324 31.2
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 2.2e-17 94.7 66 71.2
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 9.2e-16 89.4 98 49.0
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 5.6e-13 80.1 63 54.0
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 1.3e-09 68.9 35 74.3
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-09 67.0 41 65.9
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 2.3e-06 58.2 38 63.2


User provided reference genes

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