Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.2e-157 559.7 273 100.0
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 6.3e-125 451.1 271 77.5
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 5.9e-123 444.5 269 76.2
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.2e-121 438.3 269 75.1
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 5.5e-121 438.0 270 74.4
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.6e-120 436.4 269 74.7
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 1.1e-118 430.3 269 72.9
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 2.5e-118 429.1 269 73.2
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 4.3e-118 428.3 269 71.0
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 4.3e-118 428.3 269 71.7
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.8e-117 425.6 269 72.9
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 2.8e-117 425.6 269 72.1
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 2.8e-117 425.6 268 72.4
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 3.7e-117 425.2 269 72.9
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 4.8e-117 424.9 269 71.7
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 8.2e-117 424.1 269 72.9
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.1e-116 423.7 268 72.0
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.4e-116 423.3 271 72.3
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.8e-116 422.9 269 71.0
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.8e-116 422.9 264 72.0
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.4e-116 422.5 269 71.0
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 3.1e-116 422.2 269 71.4
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 3.1e-116 422.2 269 69.1
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 6.9e-116 421.0 269 73.2
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 6.9e-116 421.0 266 71.4
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 9.1e-116 420.6 276 71.0
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 9.1e-116 420.6 269 72.1
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.6e-115 419.1 269 71.0
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 5.9e-115 417.9 271 72.3
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 7.7e-115 417.5 269 70.6
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 7.7e-115 417.5 269 69.1
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.7e-114 416.4 269 69.1
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.7e-114 416.4 269 68.8
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.7e-114 416.4 269 69.1
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 2.2e-114 416.0 269 72.1
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 5.0e-114 414.8 283 68.2
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 5.0e-114 414.8 269 70.6
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 5.0e-114 414.8 269 70.3
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 8.5e-114 414.1 269 71.7
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.1e-113 413.7 271 70.8
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.1e-113 413.7 271 70.8
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.1e-113 413.7 269 68.4
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.1e-113 413.7 267 70.4
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.4e-113 413.3 269 69.5
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.4e-113 413.3 269 68.4
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 1.9e-113 412.9 269 69.1
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 3.2e-113 412.1 270 70.7
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 4.2e-113 411.8 269 70.6
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 4.2e-113 411.8 269 69.5
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 4.2e-113 411.8 269 70.6
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 5.5e-113 411.4 267 70.8
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 9.4e-113 410.6 269 70.6
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 9.4e-113 410.6 271 69.7
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.6e-112 409.8 269 70.6
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 2.1e-112 409.5 270 70.0
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 2.1e-112 409.5 269 66.9
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 2.7e-112 409.1 269 68.4
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 2.7e-112 409.1 269 67.7
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 3.6e-112 408.7 269 67.7
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 4.7e-112 408.3 269 70.3
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 4.7e-112 408.3 269 69.5
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.4e-111 406.8 269 70.3
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.4e-111 406.8 269 70.3
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 2.3e-111 406.0 269 69.9
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 2.3e-111 406.0 269 68.8
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.3e-111 406.0 269 70.3
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 3.9e-111 405.2 269 69.1
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 6.7e-111 404.4 272 67.6
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 8.8e-111 404.1 312 61.5
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 8.8e-111 404.1 269 66.9
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 8.8e-111 404.1 269 67.7
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.6e-110 402.5 269 69.1
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 4.4e-110 401.7 269 66.9
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 4.4e-110 401.7 293 64.8
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.3e-109 400.2 266 69.2
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 1.3e-109 400.2 270 68.5
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 2.2e-109 399.4 270 66.7
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 2.2e-109 399.4 270 66.7
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 2.2e-109 399.4 270 69.3
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 3.7e-109 398.7 270 68.1
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 3.7e-109 398.7 269 66.9
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.1e-108 397.1 270 67.4
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.2e-107 393.7 268 64.6
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.5e-107 393.3 268 64.2
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.5e-107 393.3 270 65.9
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 2.0e-107 392.9 268 66.0
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 2.2e-106 389.4 269 65.4
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 6.1e-104 381.3 266 65.0
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 3.0e-103 379.0 261 66.7
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 5.2e-103 378.3 269 64.3
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.1e-102 377.1 268 63.4
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 7.4e-102 374.4 260 65.0
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 9.1e-100 367.5 233 71.2
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.6e-99 366.7 264 63.6
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 3.2e-97 359.0 239 69.9
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.1e-96 356.3 238 67.2
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 3.6e-96 355.5 269 61.0
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.3e-85 320.5 197 73.6
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 2.5e-81 306.2 255 56.5
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 3.6e-72 275.8 171 73.7
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.3e-69 267.3 259 48.3
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 2.7e-67 259.6 254 50.8
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.8e-63 246.9 256 46.1
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 4.4e-62 242.3 253 46.2
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.0e-50 203.0 152 62.5
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 9.3e-44 181.4 253 37.9
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 1.7e-37 160.6 103 71.8
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.8e-37 159.5 95 74.7
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 7.1e-36 155.2 166 51.2
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.6e-35 154.1 195 43.1
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 3.6e-32 142.9 94 68.1
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 8.1e-32 141.7 95 65.3
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 2.0e-30 137.1 287 33.8
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 6.0e-27 125.6 74 74.3
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 2.2e-21 107.1 67 73.1
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 6.5e-21 105.5 66 72.7
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.6e-19 100.9 61 70.5
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 6.9e-07 58.9 39 64.1
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.0e-06 57.4 48 62.5


User provided reference genes

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