Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 5.9e-39 164.1 105 100.0
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 3.0e-19 98.6 77 66.2
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 4.0e-19 98.2 78 79.5
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 2.0e-18 95.9 73 67.1
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 7.5e-18 94.0 106 50.0
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 7.5e-18 94.0 73 65.8
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 1.3e-17 93.2 73 63.0
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 1.7e-17 92.8 69 72.5
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 2.8e-17 92.0 69 68.1
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 2.8e-17 92.0 80 61.2
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 3.7e-17 91.7 81 63.0
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 4.8e-17 91.3 50 84.0
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 4.8e-17 91.3 50 84.0
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 6.3e-17 90.9 100 54.0
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 8.3e-17 90.5 48 85.4
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 8.3e-17 90.5 77 64.9
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 8.3e-17 90.5 69 68.1
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 8.3e-17 90.5 81 64.2
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 1.4e-16 89.7 76 61.8
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 1.4e-16 89.7 76 61.8
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 1.4e-16 89.7 68 67.6
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 1.4e-16 89.7 73 61.6
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 1.4e-16 89.7 70 64.3
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 1.8e-16 89.4 48 85.4
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 1.8e-16 89.4 48 85.4
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 2.4e-16 89.0 76 73.7
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 3.1e-16 88.6 71 69.0
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 3.1e-16 88.6 81 61.7
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 5.4e-16 87.8 49 83.7
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 5.4e-16 87.8 70 77.1
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 5.4e-16 87.8 48 89.6
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 7.0e-16 87.4 44 90.9
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 7.0e-16 87.4 46 89.1
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 1.2e-15 86.7 74 60.8
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 1.6e-15 86.3 70 75.7
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 2.7e-15 85.5 47 80.9
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 2.7e-15 85.5 69 60.9
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 3.5e-15 85.1 79 75.9
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 4.5e-15 84.7 44 88.6
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 4.5e-15 84.7 45 86.7
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 5.9e-15 84.3 40 95.0
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 7.7e-15 84.0 50 78.0
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 1.0e-14 83.6 73 60.3
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 1.3e-14 83.2 74 68.9
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 1.7e-14 82.8 67 65.7
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 2.9e-14 82.0 86 55.8
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 2.9e-14 82.0 55 72.7
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 3.8e-14 81.6 45 82.2
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 6.5e-14 80.9 78 73.1
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 6.5e-14 80.9 78 73.1
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 8.5e-14 80.5 73 63.0
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 1.1e-13 80.1 49 79.6
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 1.5e-13 79.7 42 85.7
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 1.5e-13 79.7 45 82.2
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 1.5e-13 79.7 44 88.6
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 1.5e-13 79.7 45 82.2
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 1.5e-13 79.7 45 82.2
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 2.5e-13 79.0 42 85.7
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 3.2e-13 78.6 80 66.2
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 4.2e-13 78.2 65 75.4
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 4.2e-13 78.2 58 63.8
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 5.5e-13 77.8 48 70.8
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 5.5e-13 77.8 43 81.4
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 5.5e-13 77.8 46 80.4
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 5.5e-13 77.8 44 81.8
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 7.2e-13 77.4 47 72.3
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 7.2e-13 77.4 65 63.1
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 7.2e-13 77.4 47 72.3
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 1.2e-12 76.6 37 91.9
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 1.6e-12 76.3 48 77.1
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 1.6e-12 76.3 82 54.9
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 2.1e-12 75.9 57 64.9
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 2.1e-12 75.9 43 81.4
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 2.1e-12 75.9 45 80.0
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 6.1e-12 74.3 60 60.0
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 6.1e-12 74.3 36 91.7
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 1.4e-11 73.2 45 80.0
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 1.4e-11 73.2 71 64.8
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 1.4e-11 73.2 62 69.4
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.8e-11 72.8 45 71.1
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 1.8e-11 72.8 35 91.4
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 1.8e-11 72.8 34 94.1
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 2.3e-11 72.4 65 66.2
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 2.3e-11 72.4 41 82.9
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 2.3e-11 72.4 48 75.0
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 3.0e-11 72.0 41 82.9
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 8.8e-11 70.5 53 66.0
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 8.8e-11 70.5 63 66.7
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 8.8e-11 70.5 39 79.5
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 2.6e-10 68.9 63 68.3
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 1.7e-09 66.2 94 41.5
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 1.7e-09 66.2 63 68.3
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 1.7e-09 66.2 38 73.7
PRCOL_00001132 Prasinoderma coloniale HOM05D006246 ORTHO05D007932 2.8e-09 65.5 55 61.8
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 4.9e-09 64.7 34 85.3
Sc26g0000490 Simmondsia chinensis HOM05D006246 ORTHO05D007932 8.3e-09 63.9 45 71.1
Gohir.A05G410100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 9.2e-08 60.5 39 69.2
Pp3c16_16780 Physcomitrium patens HOM05D006246 ORTHO05D007932 9.2e-08 60.5 70 51.4
BcaB06g28525 Brassica carinata HOM05D006246 ORTHO05D007932 2.7e-07 58.9 69 49.3
BolC4t27573H Brassica oleracea HOM05D006246 ORTHO05D007932 2.7e-07 58.9 69 49.3
AT2G31305 Arabidopsis thaliana HOM05D006246 ORTHO05D007932 5.9e-07 57.8 61 57.4
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 7.7e-07 57.4 62 45.2
AL4G26530 Arabidopsis lyrata HOM05D006246 ORTHO05D007932 1.3e-06 56.6 60 56.7
Nn5g27268 Nelumbo nucifera HOM05D006246 ORTHO05D007932 1.7e-06 56.2 53 60.4
C04p19050 Brassica napus HOM05D006246 ORTHO05D007932 2.9e-06 55.5 59 52.5
BcaB06g28444 Brassica carinata HOM05D006246 ORTHO05D007932 3.8e-06 55.1 60 55.0
BraA05t20360Z Brassica rapa HOM05D006246 ORTHO05D007932 5.0e-06 54.7 58 51.7
EL10Ac1g00152 Beta vulgaris HOM05D006246 ORTHO05D007932 8.6e-06 53.9 58 53.4
Gohir.A05G410800 Gossypium hirsutum HOM05D006246 ORTHO05D007932 8.6e-06 53.9 36 69.4
Gohir.D04G005100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 8.6e-06 53.9 36 69.4
Gorai.012G006400 Gossypium raimondii HOM05D006246 ORTHO05D007932 8.6e-06 53.9 36 69.4


User provided reference genes

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