Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027373 Daucus carota HOM05D008171 ORTHO05D006541 3.4e-131 471.9 240 100.0
DCAR_002271 Daucus carota HOM05D008729 ORTHO05D006541 3.2e-12 76.6 238 33.2
SGA_v2.0_scaffold31G12622 Striga asiatica HOM05D014524 ORTHO05D006541 3.2e-12 76.6 223 34.5
Dinv43748 Davidia involucrata HOM05D008729 ORTHO05D006541 1.7e-10 70.9 218 33.5
Thecc.04G268400 Theobroma cacao HOM05D008171 ORTHO05D006541 3.0e-10 70.1 191 33.5
TWI09G1485 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 6.6e-10 68.9 203 33.5
Sabra04G0016000 Salix brachista HOM05D008171 ORTHO05D006541 8.6e-10 68.6 181 37.0
Cpa.g.sc59.27 Carica papaya HOM05D008171 ORTHO05D006541 1.5e-09 67.8 210 33.8
Manes.03G156600 Manihot esculenta HOM05D008171 ORTHO05D006541 1.9e-09 67.4 264 30.3
Migut.N00307 Erythranthe guttata HOM05D014524 ORTHO05D006541 5.6e-09 65.9 104 39.4
FAN12G2236 Fragaria x ananassa HOM05D022272 ORTHO05D006541 1.2e-08 64.7 48 60.4
FAN17G0494 Fragaria x ananassa HOM05D022272 ORTHO05D006541 1.2e-08 64.7 48 60.4
RcHm_v2.0_Chr4g0442521 Rosa chinensis HOM05D013250 ORTHO05D006541 1.2e-08 64.7 48 60.4
Actinidia31699 Actinidia chinensis HOM05D008171 ORTHO05D006541 2.1e-08 63.9 210 31.0
FAN07G0121 Fragaria x ananassa HOM05D022272 ORTHO05D006541 2.8e-08 63.5 48 58.3
Hma1.2p1_1240F.1_g269530 Hydrangea macrophylla HOM05D008729 ORTHO05D006541 2.8e-08 63.5 93 46.2
PGR119G2083 Punica granatum HOM05D008729 ORTHO05D006541 2.8e-08 63.5 104 33.7
FAN07G2840 Fragaria x ananassa HOM05D004513 ORTHO05D005459 3.6e-08 63.2 47 57.4
Dinv29788 Davidia involucrata HOM05D008171 ORTHO05D006541 4.7e-08 62.8 195 32.8
Gorai.007G269300 Gossypium raimondii HOM05D008171 ORTHO05D006541 4.7e-08 62.8 229 30.1
MSTRG.14227 Avicennia marina HOM05D014524 ORTHO05D006541 6.2e-08 62.4 213 33.3
FAN22G1062 Fragaria x ananassa HOM05D022272 ORTHO05D006541 6.2e-08 62.4 46 58.7
Gohir.D11G251100 Gossypium hirsutum HOM05D008171 ORTHO05D006541 6.2e-08 62.4 229 30.1
FvH4_4g33320 Fragaria vesca HOM05D022272 ORTHO05D006541 8.1e-08 62.0 48 58.3
Gohir.A11G241700 Gossypium hirsutum HOM05D008171 ORTHO05D006541 1.4e-07 61.2 229 30.1
SalBow8G4971 Salvia bowleyana HOM05D014524 ORTHO05D006541 1.8e-07 60.8 208 29.8
Potri.004G028100 Populus trichocarpa HOM05D008171 ORTHO05D006541 2.4e-07 60.5 208 30.3
COL.COLO4_08914 Corchorus olitorius HOM05D008171 ORTHO05D006541 4.0e-07 59.7 104 36.5
RcHm_v2.0_Chr4g0396051 Rosa chinensis HOM05D013250 ORTHO05D006541 4.0e-07 59.7 209 28.2
CiPaw.01G175900 Carya illinoinensis HOM05D008171 ORTHO05D006541 5.2e-07 59.3 94 40.4
COL.COLO4_36427 Corchorus olitorius HOM05D008171 ORTHO05D006541 5.2e-07 59.3 104 38.5
SGA_v2.0_scaffold577G53017 Striga asiatica HOM05D014524 ORTHO05D006541 5.2e-07 59.3 197 29.4
Cc03_g06490 Coffea canephora HOM05D008171 ORTHO05D006541 1.5e-06 57.8 232 27.6
COL.COLO4_37412 Corchorus olitorius HOM05D008171 ORTHO05D006541 1.5e-06 57.8 48 62.5
Potri.018G147100 Populus trichocarpa HOM05D008729 ORTHO05D006541 2.0e-06 57.4 200 32.5
Sopen05g005780 Solanum pennellii HOM05D008171 ORTHO05D006541 2.6e-06 57.0 101 35.6
Eucgr.F04204 Eucalyptus grandis HOM05D008729 ORTHO05D006541 3.4e-06 56.6 199 27.6
FAN22G0719 Fragaria x ananassa HOM05D013250 ORTHO05D006541 3.4e-06 56.6 235 29.8
Prupe.1G051700 Prunus persica HOM05D013250 ORTHO05D006541 3.4e-06 56.6 242 28.5
Rhsim06G0142400 Rhododendron simsii HOM05D008729 ORTHO05D006541 3.4e-06 56.6 202 29.7
PGSC0003DMG400000820 Solanum tuberosum HOM05D008171 ORTHO05D006541 4.4e-06 56.2 101 36.6
Sabra18G0128500 Salix brachista HOM05D008171 ORTHO05D006541 5.8e-06 55.8 217 32.3
Cc00_g01630 Coffea canephora HOM05D008729 ORTHO05D006541 7.6e-06 55.5 100 36.0
Thecc.05G282200 Theobroma cacao HOM05D008171 ORTHO05D006541 7.6e-06 55.5 39 64.1
TWI09G0902 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 7.6e-06 55.5 190 30.5
Cfa014809 Carpinus fangiana HOM05D008171 ORTHO05D006541 9.9e-06 55.1 59 52.5


User provided reference genes

Program Settings