Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_026103 Daucus carota HOM05D003533 ORTHO05D004009 4.4e-36 154.1 76 100.0
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 3.8e-11 71.2 85 51.8
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 4.9e-11 70.9 81 55.6
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 4.9e-11 70.9 84 53.6
vmacro16587 Vaccinium macrocarpon HOM05D003533 ORTHO05D004009 6.4e-11 70.5 77 53.2
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 1.1e-10 69.7 85 55.3
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 1.9e-10 68.9 80 55.0
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 3.2e-10 68.2 83 51.8
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 5.4e-10 67.4 82 53.7
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 5.4e-10 67.4 82 53.7
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 5.4e-10 67.4 75 53.3
SalBow2G1603 Salvia bowleyana HOM05D003533 ORTHO05D004009 5.4e-10 67.4 73 52.1
SalBow2G3186 Salvia bowleyana HOM05D003533 ORTHO05D004009 5.4e-10 67.4 73 52.1
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 7.1e-10 67.0 78 52.6
Rhsim12G0161500 Rhododendron simsii HOM05D003533 ORTHO05D004009 7.1e-10 67.0 78 55.1
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 7.1e-10 67.0 76 51.3
MBI14_g31147_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 9.2e-10 66.6 77 53.2
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 1.6e-09 65.9 80 55.0
Nitab4.5_0002059g0090 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.6e-09 65.9 85 54.1
Nitab4.5_0002059g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.6e-09 65.9 83 51.8
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 1.6e-09 65.9 78 55.1
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 1.6e-09 65.9 78 55.1
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 2.1e-09 65.5 75 52.0
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 2.7e-09 65.1 82 53.7
Migut.L01388 Erythranthe guttata HOM05D003533 ORTHO05D004009 3.5e-09 64.7 71 52.1
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 4.6e-09 64.3 80 53.8
Nitab4.5_0002312g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 6.0e-09 63.9 86 50.0
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 7.8e-09 63.5 78 53.8
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.0e-08 63.2 95 49.5
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 1.3e-08 62.8 78 50.0
Aqoxy3G03117 Aquilegia oxysepala HOM05D003533 ORTHO05D004009 1.7e-08 62.4 84 50.0
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.7e-08 62.4 80 47.5
MBI14_g31145_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D004009 1.7e-08 62.4 76 51.3
Nitab4.5_0002312g0110 Nicotiana tabacum HOM05D003533 ORTHO05D004009 1.7e-08 62.4 84 50.0
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 1.7e-08 62.4 81 50.6
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.3e-08 62.0 82 52.4
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.3e-08 62.0 82 52.4
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.3e-08 62.0 82 52.4
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 2.3e-08 62.0 74 51.4
Sc04g0002090 Simmondsia chinensis HOM05D003533 ORTHO05D004009 2.3e-08 62.0 88 45.5
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 3.0e-08 61.6 75 53.3
C08p42830 Brassica napus HOM05D003533 ORTHO05D004009 3.9e-08 61.2 67 52.2
BolC8t51839H Brassica oleracea HOM05D003533 ORTHO05D004009 3.9e-08 61.2 67 52.2
CiPaw.11G032200 Carya illinoinensis HOM05D003533 ORTHO05D004009 3.9e-08 61.2 86 47.7
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 3.9e-08 61.2 79 50.6
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 3.9e-08 61.2 76 52.6
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 3.9e-08 61.2 77 54.5
Nitab4.5_0003386g0040 Nicotiana tabacum HOM05D003533 ORTHO05D004009 5.1e-08 60.8 73 50.7
PGSC0003DMG400022647 Solanum tuberosum HOM05D003533 ORTHO05D004009 5.1e-08 60.8 81 50.6
Ah.02g112790 Amaranthus hybridus HOM05D003533 ORTHO05D004009 6.6e-08 60.5 86 48.8
CAN.G159.12 Capsicum annuum HOM05D003533 ORTHO05D004009 6.6e-08 60.5 87 46.0
FAN13G2147 Fragaria x ananassa HOM05D003533 ORTHO05D004009 6.6e-08 60.5 91 50.5
Lj1g0014022 Lotus japonicus HOM05D003533 ORTHO05D004009 6.6e-08 60.5 69 53.6
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 8.7e-08 60.1 82 51.2
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 8.7e-08 60.1 80 50.0
MBI14_g31148_MAGBIO Magnolia biondii HOM05D003533 ORTHO05D011084 8.7e-08 60.1 70 51.4
PSO013G0065 Papaver somniferum HOM05D003533 ORTHO05D004009 8.7e-08 60.1 85 48.2
TPR.G31485 Trifolium pratense HOM05D003533 ORTHO05D004009 8.7e-08 60.1 70 52.9
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 1.1e-07 59.7 74 51.4
Medtr3g078420 Medicago truncatula HOM05D003533 ORTHO05D004009 1.1e-07 59.7 70 51.4
Solyc03g113810.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 1.1e-07 59.7 76 51.3
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.5e-07 59.3 80 51.2
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 1.5e-07 59.3 84 47.6
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 1.5e-07 59.3 80 51.2
BraA09t41332Z Brassica rapa HOM05D003533 ORTHO05D004009 2.5e-07 58.5 67 50.7
Phvul.009G182200 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 3.3e-07 58.2 71 53.5
AL1G31580 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 4.3e-07 57.8 83 45.8
AT1G19020 Arabidopsis thaliana HOM05D003533 ORTHO05D004009 4.3e-07 57.8 85 44.7
Cc11_g14110 Coffea canephora HOM05D003533 ORTHO05D004009 4.3e-07 57.8 78 46.2
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 4.3e-07 57.8 91 48.4
MD06G1181300 Malus domestica HOM05D003533 ORTHO05D004009 4.3e-07 57.8 83 50.6
Oeu005690.1 Olea europaea HOM05D003533 ORTHO05D004009 4.3e-07 57.8 74 47.3
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 5.6e-07 57.4 79 48.1
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 5.6e-07 57.4 85 45.9
unitig_22.g6479 Utricularia gibba HOM05D003533 ORTHO05D004009 5.6e-07 57.4 67 46.3
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 7.3e-07 57.0 80 48.8
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 9.6e-07 56.6 76 44.7
Glyma.04G178500 Glycine max HOM05D003533 ORTHO05D004009 9.6e-07 56.6 69 52.2
Gohir.D05G321600 Gossypium hirsutum HOM05D003533 ORTHO05D004009 9.6e-07 56.6 78 47.4
Gorai.009G345100 Gossypium raimondii HOM05D003533 ORTHO05D004009 9.6e-07 56.6 78 47.4
Zm00001eb254120 Zea mays HOM05D003533 ORTHO05D004009 9.6e-07 56.6 75 48.0
FAN07G1024 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.2e-06 56.2 80 50.0
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 1.2e-06 56.2 84 48.8
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 1.6e-06 55.8 78 48.7
Psat0s489g0040 Pisum sativum HOM05D003533 ORTHO05D004009 1.6e-06 55.8 69 50.7
Solyc05g006390.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 1.6e-06 55.8 78 51.3
Sopen03g032860 Solanum pennellii HOM05D003533 ORTHO05D004009 1.6e-06 55.8 77 50.6
Lalb_Chr12g0201361 Lupinus albus HOM05D003533 ORTHO05D004009 2.1e-06 55.5 88 45.5
PGR083G0433 Punica granatum HOM05D003533 ORTHO05D004009 2.1e-06 55.5 83 49.4
Sopen05g002310 Solanum pennellii HOM05D003533 ORTHO05D004009 2.1e-06 55.5 78 51.3
PGSC0003DMG400024583 Solanum tuberosum HOM05D003533 ORTHO05D004009 2.1e-06 55.5 76 50.0
Ca_16210_v3 Cicer arietinum L. HOM05D003533 ORTHO05D004009 3.6e-06 54.7 69 49.3
Migut.I00058 Erythranthe guttata HOM05D003533 ORTHO05D004009 3.6e-06 54.7 74 51.4
BcaC07g41276 Brassica carinata HOM05D003533 ORTHO05D004009 4.7e-06 54.3 83 41.0
Prupe.5G179600 Prunus persica HOM05D003533 ORTHO05D004009 4.7e-06 54.3 71 50.7
Gohir.A05G319400 Gossypium hirsutum HOM05D003533 ORTHO05D004009 6.2e-06 53.9 78 48.7
Thecc.02G240400 Theobroma cacao HOM05D003533 ORTHO05D004009 6.2e-06 53.9 79 49.4
TPR.G37447 Trifolium pratense HOM05D003533 ORTHO05D004009 6.2e-06 53.9 76 50.0
Cc11_g14120 Coffea canephora HOM05D003533 ORTHO05D004009 8.1e-06 53.5 76 46.1
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 8.1e-06 53.5 79 48.1
Rhsim12G0161400 Rhododendron simsii HOM05D003533 ORTHO05D004009 8.1e-06 53.5 71 49.3


User provided reference genes

Program Settings