Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 6.4e-241 837.0 430 100.0
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 1.4e-182 643.3 438 76.7
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 1.1e-176 623.6 438 75.6
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 1.0e-169 600.5 440 72.0
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 5.0e-169 598.2 438 72.6
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 2.7e-167 592.4 438 69.9
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 1.7e-164 583.2 438 69.2
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 2.2e-164 582.8 440 70.7
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 3.7e-164 582.0 438 71.2
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 4.8e-164 581.6 436 70.2
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 8.3e-164 580.9 436 70.0
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 8.3e-164 580.9 436 69.7
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.1e-163 580.5 435 69.4
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 2.4e-163 579.3 402 74.1
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 3.1e-163 578.9 435 69.0
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 5.3e-163 578.2 435 69.0
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.6e-162 576.6 438 69.2
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 5.9e-162 574.7 435 68.5
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 1.3e-161 573.5 443 68.8
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.3e-161 573.5 436 68.1
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 3.8e-161 572.0 436 70.2
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 8.5e-161 570.9 432 70.8
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 2.5e-160 569.3 438 67.8
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 1.6e-159 566.6 439 69.7
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 2.7e-159 565.8 443 68.2
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 2.6e-157 559.3 450 66.7
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 9.8e-157 557.4 540 60.7
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 2.4e-155 552.7 432 67.1
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.0e-154 549.7 432 68.3
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 2.7e-154 549.3 434 67.7
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 3.5e-154 548.9 435 66.9
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 5.9e-154 548.1 442 68.3
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 5.9e-154 548.1 437 69.3
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.3e-153 547.0 437 68.2
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 1.3e-153 547.0 560 58.2
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.7e-153 546.6 440 65.9
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 2.3e-153 546.2 441 66.9
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 2.9e-153 545.8 440 65.7
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 5.0e-153 545.0 443 65.9
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 6.6e-153 544.7 439 66.7
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 1.1e-152 543.9 416 70.2
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 4.7e-151 538.5 429 67.4
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 4.7e-151 538.5 435 65.3
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 1.8e-150 536.6 357 77.9
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 1.5e-149 533.5 431 66.6
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 5.7e-149 531.6 436 67.0
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 5.7e-149 531.6 522 58.2
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 8.3e-148 527.7 448 65.0
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 3.9e-145 518.8 436 65.8
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 4.3e-144 515.4 430 64.2
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 4.0e-142 508.8 434 63.8
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 2.6e-141 506.1 522 56.1
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 1.7e-140 503.4 411 67.2
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 3.7e-140 502.3 411 66.2
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 6.0e-138 495.0 405 65.2
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 7.8e-138 494.6 436 64.4
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 2.3e-137 493.0 411 66.7
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.6e-135 486.9 410 66.1
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 4.7e-135 485.3 360 70.8
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 6.2e-135 485.0 418 63.4
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 2.3e-134 483.0 427 63.2
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 7.5e-133 478.0 423 63.4
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.1e-131 474.2 440 60.5
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 1.4e-131 473.8 427 62.3
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 2.4e-131 473.0 428 62.4
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 4.1e-131 472.2 430 61.9
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 5.4e-131 471.9 432 61.6
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 2.1e-130 469.9 406 63.3
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 2.1e-130 469.9 358 68.4
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 3.5e-130 469.2 437 59.5
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 1.0e-129 467.6 453 58.5
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 6.6e-129 464.9 361 70.4
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 1.9e-128 463.4 446 60.3
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 9.5e-128 461.1 372 66.7
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 2.8e-127 459.5 442 59.5
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 3.7e-124 449.1 429 60.6
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.4e-123 447.2 324 72.8
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.2e-122 444.1 436 60.8
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 1.0e-121 441.0 354 66.7
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 2.3e-121 439.9 409 60.6
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 1.1e-120 437.6 355 67.6
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 7.3e-120 434.9 411 61.6
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.6e-119 433.7 438 58.0
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 5.2e-118 428.7 360 63.9
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 5.8e-117 425.2 361 63.2
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 1.3e-116 424.1 356 66.3
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 1.3e-116 424.1 448 53.8
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.4e-115 420.6 437 52.2
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 2.4e-115 419.9 355 66.5
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 7.1e-115 418.3 429 53.8
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 1.0e-113 414.5 355 62.5
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 1.0e-113 414.5 357 62.7
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 5.1e-113 412.1 405 58.3
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 6.6e-113 411.8 363 62.3
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 1.8e-110 403.7 357 63.0
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 1.4e-107 394.0 436 54.8
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 3.5e-106 389.4 350 63.1
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 5.3e-102 375.6 404 53.7
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 2.2e-100 370.2 331 63.1
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 6.4e-100 368.6 329 62.6
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 6.4e-100 368.6 332 62.7
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 2.1e-95 353.6 440 49.3
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 1.7e-92 344.0 392 49.5
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 5.1e-89 332.4 394 51.3
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 1.3e-87 327.8 398 50.3
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 1.4e-86 324.3 432 44.2
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 3.4e-85 319.7 306 57.2
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 2.8e-79 300.1 359 49.6
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 3.6e-74 283.1 224 65.2
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 1.8e-73 280.8 325 53.2
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 1.6e-66 257.7 200 66.0
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.0e-61 240.7 304 49.3
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 8.2e-55 218.8 227 58.1
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 9.8e-48 195.3 295 38.6
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.7e-47 194.5 326 40.8
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.1e-38 165.2 208 48.6
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 1.5e-35 154.8 329 36.5
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 4.7e-34 149.8 79 93.7
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 2.0e-32 144.4 79 92.4
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 4.4e-32 143.3 79 88.6
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 3.7e-31 140.2 79 87.3
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 3.7e-31 140.2 79 87.3
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 1.1e-30 138.7 79 87.3
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 9.2e-30 135.6 79 84.8
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 3.5e-29 133.7 79 83.5
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 7.8e-29 132.5 79 81.0
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 1.7e-28 131.3 79 82.3
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 3.9e-28 130.2 79 79.7
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 6.6e-28 129.4 72 87.5
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.6e-26 123.6 79 78.5
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 1.8e-25 121.3 79 73.4
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 5.4e-14 83.2 96 53.1
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 4.6e-13 80.1 44 88.6
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.5e-11 74.3 54 68.5
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 3.1e-09 67.4 69 47.8
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 6.8e-09 66.2 90 43.3
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 1.1e-06 58.9 30 86.7
arahy.Tifrunner.gnm1.ann1.T9YY8P Arachis hypogaea HOM05D004161 ORTHO05D005770 9.2e-06 55.8 143 28.7
Haze_26449 Corylus avellana HOM05D004161 ORTHO05D005770 9.2e-06 55.8 152 30.9


User provided reference genes

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