Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025271 Daucus carota HOM05D000786 ORTHO05D000779 2.0e-59 232.3 117 100.0
TAR636G3362 Trochodendron aralioides HOM05D000786 ORTHO05D000779 1.3e-07 60.1 62 53.2
CARHR080180 Cardamine hirsuta HOM05D000786 ORTHO05D000779 1.7e-07 59.7 54 55.6
Manes.01G225400 Manihot esculenta HOM05D000786 ORTHO05D000779 2.3e-07 59.3 59 54.2
Medtr8g018320 Medicago truncatula HOM05D000786 ORTHO05D000779 2.3e-07 59.3 56 53.6
Medtr8g018360 Medicago truncatula HOM05D000786 ORTHO05D000779 2.3e-07 59.3 56 53.6
PGR083G1617 Punica granatum HOM05D000786 ORTHO05D000779 2.3e-07 59.3 57 43.9
Sopen01g043790 Solanum pennellii HOM05D000786 ORTHO05D000779 2.3e-07 59.3 55 47.3
Nn3g21623 Nelumbo nucifera HOM05D000786 ORTHO05D000779 3.0e-07 58.9 53 52.8
C04p00400 Brassica napus HOM05D000786 ORTHO05D000779 3.9e-07 58.5 80 43.8
Aa31LG5G16150 Aethionema arabicum HOM05D000786 ORTHO05D000779 6.6e-07 57.8 65 47.7
BcaC05g29785 Brassica carinata HOM05D000786 ORTHO05D000779 6.6e-07 57.8 57 52.6
CSS0019360 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 8.6e-07 57.4 94 38.3
MBI18_g24950_MAGBIO Magnolia biondii HOM05D000786 ORTHO05D000779 8.6e-07 57.4 76 38.2
TPR.G7896 Trifolium pratense HOM05D000786 ORTHO05D000779 8.6e-07 57.4 47 59.6
BolC4t21685H Brassica oleracea HOM05D000786 ORTHO05D000779 1.1e-06 57.0 105 39.0
Thhalv10001686m.g Eutrema salsugineum HOM05D000786 ORTHO05D000779 1.1e-06 57.0 113 38.1
Gorai.008G141600 Gossypium raimondii HOM05D000786 ORTHO05D000779 1.1e-06 57.0 108 38.0
Lalb_Chr18g0046031 Lupinus albus HOM05D000786 ORTHO05D000779 1.1e-06 57.0 52 50.0
PGSC0003DMG400002816 Solanum tuberosum HOM05D000786 ORTHO05D000779 1.1e-06 57.0 55 45.5
Medtr7g112020 Medicago truncatula HOM05D000786 ORTHO05D000779 1.5e-06 56.6 51 49.0
TAR362G0003 Trochodendron aralioides HOM05D000786 ORTHO05D000779 1.5e-06 56.6 83 41.0
C05p61500 Brassica napus HOM05D000786 ORTHO05D000779 1.9e-06 56.2 57 50.9
BraA05t22947Z Brassica rapa HOM05D000786 ORTHO05D000779 1.9e-06 56.2 57 50.9
Cpa.g.sc48.139 Carica papaya HOM05D000786 ORTHO05D000779 1.9e-06 56.2 52 51.9
Sp3g32830 Schrenkiella parvula HOM05D000786 ORTHO05D000779 1.9e-06 56.2 52 51.9
CARHR109900 Cardamine hirsuta HOM05D000786 ORTHO05D000779 2.5e-06 55.8 50 52.0
TWI18G0458 Tripterygium wilfordii HOM05D000786 ORTHO05D000779 2.5e-06 55.8 47 57.4
A05p00450 Brassica napus HOM05D000786 ORTHO05D000779 3.3e-06 55.5 105 39.0
BraA05t19043Z Brassica rapa HOM05D000786 ORTHO05D000779 3.3e-06 55.5 105 39.0
MD12G1207900 Malus domestica HOM05D000786 ORTHO05D000779 3.3e-06 55.5 112 33.0
Carub.0003s3374 Capsella rubella HOM05D000786 ORTHO05D000779 4.3e-06 55.1 57 43.9
Cc02_g34770 Coffea canephora HOM05D000786 ORTHO05D000779 4.3e-06 55.1 46 54.3
CsaV3_3G005210 Cucumis sativus L. HOM05D000786 ORTHO05D000779 4.3e-06 55.1 47 46.8
Gohir.D12G130300 Gossypium hirsutum HOM05D000786 ORTHO05D000779 4.3e-06 55.1 107 37.4
Sp3g04610 Schrenkiella parvula HOM05D000786 ORTHO05D000779 4.3e-06 55.1 57 49.1
MSTRG.20397 Avicennia marina HOM05D000786 ORTHO05D000779 5.6e-06 54.7 52 42.3
BcaB02g08768 Brassica carinata HOM05D000786 ORTHO05D000779 5.6e-06 54.7 60 46.7
Cpa.g.sc18.2 Carica papaya HOM05D000786 ORTHO05D000779 5.6e-06 54.7 106 35.8
SHI00507 Sapria himalayana HOM05D000786 ORTHO05D000779 5.6e-06 54.7 48 47.9
Atru.chr5.1054 Acer truncatum HOM05D000786 ORTHO05D000779 7.3e-06 54.3 53 50.9
AL3G48790 Arabidopsis lyrata HOM05D000786 ORTHO05D000779 7.3e-06 54.3 50 50.0
AT2G19460 Arabidopsis thaliana HOM05D000786 ORTHO05D000779 7.3e-06 54.3 50 50.0
Thhalv10021773m.g Eutrema salsugineum HOM05D000786 ORTHO05D000779 7.3e-06 54.3 58 46.6
PGSC0003DMG400032797 Solanum tuberosum HOM05D000786 ORTHO05D000779 7.3e-06 54.3 74 43.2
TAR365G1099 Trochodendron aralioides HOM05D000786 ORTHO05D000779 7.3e-06 54.3 58 46.6
Carub.0003s0508 Capsella rubella HOM05D000786 ORTHO05D000779 9.5e-06 53.9 59 47.5
Migut.B00992 Erythranthe guttata HOM05D000786 ORTHO05D000779 9.5e-06 53.9 57 42.1
Prupe.6G315400 Prunus persica HOM05D000786 ORTHO05D000779 9.5e-06 53.9 90 30.0
Solyc07g040730.1 Solanum lycopersicum HOM05D000786 ORTHO05D000779 9.5e-06 53.9 93 38.7
Sopen07g019470 Solanum pennellii HOM05D000786 ORTHO05D000779 9.5e-06 53.9 93 38.7
THA.LOC104818741 Tarenaya hassleriana HOM05D000786 ORTHO05D000779 9.5e-06 53.9 74 36.5


User provided reference genes

Program Settings