Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022778 Daucus carota HOM05D001991 ORTHO05D002030 6.0e-52 207.2 104 100.0
DCAR_022779 Daucus carota HOM05D001991 ORTHO05D002030 6.0e-52 207.2 104 100.0
DCAR_012115 Daucus carota HOM05D001991 ORTHO05D002030 4.4e-47 191.0 104 91.3
DCAR_009939 Daucus carota HOM05D000460 ORTHO05D000333 1.7e-46 189.1 104 90.4
Lj5P183T88 Lonicera japonica HOM05D001991 ORTHO05D002030 3.0e-27 125.2 106 67.0
Dinv41971 Davidia involucrata HOM05D001991 ORTHO05D002030 4.3e-26 121.3 103 65.0
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 4.8e-25 117.9 98 66.3
Actinidia20489 Actinidia chinensis HOM05D001991 ORTHO05D002030 1.1e-24 116.7 97 63.9
CSS0034955 Camellia sinensis var. sinensis HOM05D001991 ORTHO05D002030 2.0e-23 112.5 96 63.5
Lj9P390T58 Lonicera japonica HOM05D001991 ORTHO05D002030 3.4e-23 111.7 88 68.2
GSVIVG01024072001 Vitis vinifera HOM05D001991 ORTHO05D002030 7.6e-23 110.5 95 62.1
Cc02_g16460 Coffea canephora HOM05D001991 ORTHO05D002030 2.2e-22 109.0 89 67.4
Prupe.8G161300 Prunus persica HOM05D001991 ORTHO05D002030 2.2e-22 109.0 98 59.2
Nn5g29104 Nelumbo nucifera HOM05D001991 ORTHO05D002030 8.4e-22 107.1 100 59.0
MSTRG.20015 Avicennia marina HOM05D001991 ORTHO05D002030 2.5e-21 105.5 101 59.4
Lalb_Chr01g0001671 Lupinus albus HOM05D001991 ORTHO05D002030 2.5e-21 105.5 91 59.3
PGR142G0784 Punica granatum HOM05D001991 ORTHO05D002030 3.2e-21 105.1 88 60.2
FAN24G0537 Fragaria x ananassa HOM05D001991 ORTHO05D002030 7.2e-21 104.0 104 55.8
MD05G1116800 Malus domestica HOM05D001991 ORTHO05D002030 7.2e-21 104.0 98 58.2
Oeu060420.1 Olea europaea HOM05D001991 ORTHO05D002030 7.2e-21 104.0 101 55.4
MD10G1119900 Malus domestica HOM05D001991 ORTHO05D002030 9.3e-21 103.6 89 60.7
Oeu050537.1 Olea europaea HOM05D001991 ORTHO05D002030 9.3e-21 103.6 98 57.1
CSS0044440 Camellia sinensis var. sinensis HOM05D001991 ORTHO05D002030 2.1e-20 102.4 99 59.6
SalBow6G0737 Salvia bowleyana HOM05D001991 ORTHO05D002030 2.1e-20 102.4 89 60.7
VMungo1127G1801 Vigna mungo HOM05D001991 ORTHO05D002030 2.1e-20 102.4 103 54.4
FvH4_2g01750 Fragaria vesca HOM05D001991 ORTHO05D002030 2.7e-20 102.1 104 54.8
FAN15G2134 Fragaria x ananassa HOM05D001991 ORTHO05D002030 2.7e-20 102.1 104 54.8
RcHm_v2.0_Chr6g0244781 Rosa chinensis HOM05D001991 ORTHO05D002030 3.5e-20 101.7 89 60.7
TAR376G0062 Trochodendron aralioides HOM05D001991 ORTHO05D002030 6.1e-20 100.9 103 54.4
Medtr4g074040 Medicago truncatula HOM05D001991 ORTHO05D002030 7.9e-20 100.5 79 64.6
MSTRG.16883 Avicennia marina HOM05D001991 ORTHO05D002030 1.3e-19 99.8 94 57.4
Psat7g174440 Pisum sativum HOM05D001991 ORTHO05D002030 1.3e-19 99.8 81 65.4
CANSAT25G2203 Cannabis sativa HOM05D001991 ORTHO05D002030 1.8e-19 99.4 77 70.1
Ca_03054_v3 Cicer arietinum L. HOM05D001991 ORTHO05D002030 1.8e-19 99.4 79 65.8
TAR628G0391 Trochodendron aralioides HOM05D001991 ORTHO05D002030 1.8e-19 99.4 86 58.1
FAN20G2078 Fragaria x ananassa HOM05D001991 ORTHO05D002030 2.3e-19 99.0 104 54.8
PSO675G7637 Papaver somniferum HOM05D001991 ORTHO05D002030 2.3e-19 99.0 99 53.5
TPR.G19905 Trifolium pratense HOM05D001991 ORTHO05D002030 2.3e-19 99.0 76 67.1
arahy.Tifrunner.gnm1.ann1.H3HBDV Arachis hypogaea HOM05D001991 ORTHO05D002030 3.0e-19 98.6 93 59.1
FAN27G1115 Fragaria x ananassa HOM05D001991 ORTHO05D002030 3.0e-19 98.6 104 53.8
Glyma.11G105400 Glycine max HOM05D001991 ORTHO05D002030 3.0e-19 98.6 93 58.1
vmacro02254 Vaccinium macrocarpon HOM05D001991 ORTHO05D002030 3.0e-19 98.6 101 59.4
Cpa.g.sc37.183 Carica papaya HOM05D001991 ORTHO05D002030 3.9e-19 98.2 98 54.1
MBI09_g29903_MAGBIO Magnolia biondii HOM05D001991 ORTHO05D002030 3.9e-19 98.2 77 67.5
Oeu055650.2 Olea europaea HOM05D001991 ORTHO05D002030 3.9e-19 98.2 100 57.0
Peaxi162Scf00362g00949 Petunia axillaris HOM05D001991 ORTHO05D002030 5.1e-19 97.8 99 59.6
arahy.Tifrunner.gnm1.ann1.CXE5JY Arachis hypogaea HOM05D001991 ORTHO05D002030 1.1e-18 96.7 93 58.1
PSO541G0135 Papaver somniferum HOM05D001991 ORTHO05D002030 1.1e-18 96.7 94 54.3
Phvul.011G033300 Phaseolus vulgaris HOM05D001991 ORTHO05D002030 1.5e-18 96.3 100 54.0
Sabra09G0099600 Salix brachista HOM05D001991 ORTHO05D002030 1.5e-18 96.3 92 59.8
Sabra09G0100900 Salix brachista HOM05D001991 ORTHO05D002030 1.5e-18 96.3 92 59.8
Potri.009G130200 Populus trichocarpa HOM05D001991 ORTHO05D002030 1.9e-18 95.9 92 58.7
ClCG02G011610 Citrullus lanatus HOM05D001991 ORTHO05D002030 3.3e-18 95.1 96 54.2
Solyc01g111200.3 Solanum lycopersicum HOM05D001991 ORTHO05D002030 3.3e-18 95.1 97 53.6
Glyma.12G030200 Glycine max HOM05D001991 ORTHO05D002030 5.7e-18 94.4 96 57.3
Sed0018167 Sechium edule HOM05D001991 ORTHO05D002030 5.7e-18 94.4 98 53.1
unitig_0.g828 Utricularia gibba HOM05D001991 ORTHO05D002030 5.7e-18 94.4 102 53.9
Sopen01g053250 Solanum pennellii HOM05D001991 ORTHO05D002030 7.4e-18 94.0 97 53.6
Lalb_Chr03g0025001 Lupinus albus HOM05D001991 ORTHO05D002030 9.7e-18 93.6 88 58.0
CDE05G1487 Ceratophyllum demersum HOM05D001991 ORTHO05D002030 2.2e-17 92.4 83 57.8
Migut.B00116 Erythranthe guttata HOM05D001991 ORTHO05D002030 2.2e-17 92.4 88 61.4
SGA_v2.0_scaffold58G20423 Striga asiatica HOM05D001375 ORTHO05D001222 2.2e-17 92.4 100 54.0
Manes.11G090500 Manihot esculenta HOM05D001991 ORTHO05D002030 2.8e-17 92.0 101 54.5
Hund06409 Selenicereus undatus HOM05D001991 ORTHO05D002030 3.7e-17 91.7 84 60.7
Duzib052G0141 Durio zibethinus HOM05D001991 ORTHO05D002030 4.8e-17 91.3 93 52.7
Thhalv10025358m.g Eutrema salsugineum HOM05D001991 ORTHO05D002030 4.8e-17 91.3 86 60.5
Gohir.A04G122600 Gossypium hirsutum HOM05D001991 ORTHO05D002030 6.3e-17 90.9 103 48.5
Gorai.012G153000 Gossypium raimondii HOM05D001991 ORTHO05D002030 6.3e-17 90.9 103 49.5
Lj3g0017262 Lotus japonicus HOM05D001991 ORTHO05D002030 6.3e-17 90.9 92 54.3
Aa31LG6G16470 Aethionema arabicum HOM05D001991 ORTHO05D002030 8.2e-17 90.5 79 63.3
CDE05G1573 Ceratophyllum demersum HOM05D001991 ORTHO05D002030 8.2e-17 90.5 89 55.1
Lsat_1_v5_gn_4_74740 Lactuca sativa HOM05D001991 ORTHO05D002030 8.2e-17 90.5 95 53.7
CsaV3_2G015760 Cucumis sativus L. HOM05D001991 ORTHO05D002030 1.1e-16 90.1 97 53.6
Gohir.D04G164600 Gossypium hirsutum HOM05D001991 ORTHO05D002030 1.1e-16 90.1 103 49.5
A08p24060 Brassica napus HOM05D001991 ORTHO05D002030 1.4e-16 89.7 76 61.8
Oeu042186.2 Olea europaea HOM05D001991 ORTHO05D002030 1.4e-16 89.7 95 52.6
MELO3C020790.2 Cucumis melo HOM05D001991 ORTHO05D002030 1.8e-16 89.4 98 53.1
TWI75G0461 Tripterygium wilfordii HOM05D001991 ORTHO05D002030 2.4e-16 89.0 98 51.0
TWI79G0271 Tripterygium wilfordii HOM05D001991 ORTHO05D002030 3.1e-16 88.6 97 54.6
BraA08t34362Z Brassica rapa HOM05D001991 ORTHO05D002030 4.1e-16 88.2 79 60.8
Sed0007163 Sechium edule HOM05D001991 ORTHO05D002030 4.1e-16 88.2 91 54.9
Gohir.A12G038700 Gossypium hirsutum HOM05D001991 ORTHO05D002030 6.9e-16 87.4 88 56.8
Gohir.D12G033600 Gossypium hirsutum HOM05D001991 ORTHO05D002030 6.9e-16 87.4 88 56.8
Gorai.008G034500 Gossypium raimondii HOM05D001991 ORTHO05D002030 6.9e-16 87.4 88 56.8
THA.LOC104804098 Tarenaya hassleriana HOM05D001991 ORTHO05D002030 9.0e-16 87.0 80 61.2
Sed0026833 Sechium edule HOM05D001991 ORTHO05D002030 1.2e-15 86.7 94 51.1
AT4G38710 Arabidopsis thaliana HOM05D001991 ORTHO05D002030 1.5e-15 86.3 79 62.0
BcaB03g12220 Brassica carinata HOM05D001991 ORTHO05D002030 1.5e-15 86.3 79 60.8
CiPaw.05G077800 Carya illinoinensis HOM05D001991 ORTHO05D002030 1.5e-15 86.3 88 55.7
Sp7g37080 Schrenkiella parvula HOM05D001991 ORTHO05D002030 1.5e-15 86.3 80 60.0
Nitab4.5_0000980g0040 Nicotiana tabacum HOM05D001991 ORTHO05D002030 2.0e-15 85.9 103 55.3
Thecc.02G066300 Theobroma cacao HOM05D001991 ORTHO05D002030 2.0e-15 85.9 89 52.8
BcaC01g00250 Brassica carinata HOM05D001991 ORTHO05D002030 2.6e-15 85.5 80 61.2
HanXRQChr10g0298951 Helianthus annuus HOM05D001991 ORTHO05D002030 2.6e-15 85.5 98 57.1
C03p77250 Brassica napus HOM05D001991 ORTHO05D002030 5.9e-15 84.3 80 60.0
BolC3t19979H Brassica oleracea HOM05D001991 ORTHO05D002030 5.9e-15 84.3 80 60.0
Nitab4.5_0000283g0030 Nicotiana tabacum HOM05D001991 ORTHO05D002030 5.9e-15 84.3 103 54.4
Sabra04G0113400 Salix brachista HOM05D001991 ORTHO05D002030 5.9e-15 84.3 92 54.3
Carub.0007s0058 Capsella rubella HOM05D001991 ORTHO05D002030 7.7e-15 84.0 80 60.0
ClCG02G004270 Citrullus lanatus HOM05D001991 ORTHO05D002030 1.0e-14 83.6 83 55.4
Duzib248G0809 Durio zibethinus HOM05D001991 ORTHO05D002030 1.3e-14 83.2 101 46.5
SalBow3G1371 Salvia bowleyana HOM05D001991 ORTHO05D002030 1.7e-14 82.8 94 52.1
Haze_02190 Corylus avellana HOM05D001991 ORTHO05D002030 2.2e-14 82.4 100 50.0
Potri.004G169100 Populus trichocarpa HOM05D001991 ORTHO05D002030 2.2e-14 82.4 94 53.2
AL7G10600 Arabidopsis lyrata HOM05D001991 ORTHO05D002030 2.9e-14 82.0 80 61.2
Ciclev10028634m.g Citrus clementina HOM05D001991 ORTHO05D002030 2.9e-14 82.0 77 57.1
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 2.9e-14 82.0 88 55.7
Sed0010328 Sechium edule HOM05D001991 ORTHO05D002030 3.8e-14 81.6 84 56.0
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 3.8e-14 81.6 90 56.7
Gohir.D02G224800 Gossypium hirsutum HOM05D001991 ORTHO05D002030 5.0e-14 81.3 97 50.5
Gohir.A03G203500 Gossypium hirsutum HOM05D001991 ORTHO05D002030 8.5e-14 80.5 83 51.8
Sc08g0003150 Simmondsia chinensis HOM05D001991 ORTHO05D002030 8.5e-14 80.5 82 56.1
Cfa005190 Carpinus fangiana HOM05D001991 ORTHO05D002030 1.1e-13 80.1 103 46.6
Gorai.005G252600 Gossypium raimondii HOM05D001991 ORTHO05D002030 1.1e-13 80.1 83 51.8
CARHR294420 Cardamine hirsuta HOM05D001991 ORTHO05D002030 1.9e-13 79.3 76 57.9
AUR62010082 Chenopodium quinoa HOM05D001991 ORTHO05D002030 4.2e-13 78.2 80 53.8
COL.COLO4_17265 Corchorus olitorius HOM05D001991 ORTHO05D002030 5.5e-13 77.8 88 47.7
Ah.01g022660 Amaranthus hybridus HOM05D001991 ORTHO05D002030 1.2e-12 76.6 85 52.9
QL11p047710 Quercus lobata HOM05D001991 ORTHO05D002030 1.2e-12 76.6 104 47.1
unitig_21.g20015 Utricularia gibba HOM05D001991 ORTHO05D002030 1.6e-12 76.3 102 46.1
HPP92_026027 Vanilla planifolia HOM05D001991 ORTHO05D002030 1.6e-12 76.3 85 51.8
HPP92_027732 Vanilla planifolia HOM05D001991 ORTHO05D002030 1.6e-12 76.3 85 51.8
CsaV3_7G000840 Cucumis sativus L. HOM05D001991 ORTHO05D002030 4.6e-12 74.7 83 53.0
MELO3C013373.2 Cucumis melo HOM05D001991 ORTHO05D002030 7.9e-12 73.9 94 46.8
HPP92_022645 Vanilla planifolia HOM05D001991 ORTHO05D002030 2.3e-11 72.4 93 51.6
CiPaw.06G124800 Carya illinoinensis HOM05D001991 ORTHO05D002030 5.1e-11 71.2 91 48.4
Rhsim11G0188300 Rhododendron simsii HOM05D001991 ORTHO05D002030 8.8e-11 70.5 83 54.2
Sed0008982 Sechium edule HOM05D001991 ORTHO05D002030 1.1e-10 70.1 74 58.1
unitig_578.g16748 Utricularia gibba HOM05D001991 ORTHO05D002030 2.5e-10 68.9 79 51.9
ATR0810G264 Amborella trichopoda HOM05D001991 ORTHO05D002030 5.7e-10 67.8 80 50.0
EL10Ac9g21429 Beta vulgaris HOM05D001991 ORTHO05D002030 7.7e-07 57.4 120 34.2
CANSAT35G0514 Cannabis sativa HOM05D001991 ORTHO05D002030 3.8e-06 55.1 32 78.1
Nitab4.5_0002653g0010 Nicotiana tabacum HOM05D001991 ORTHO05D002030 5.0e-06 54.7 49 59.2
Lsat_1_v5_gn_8_152681 Lactuca sativa HOM05D001991 ORTHO05D002030 6.5e-06 54.3 56 48.2


User provided reference genes

Program Settings