Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022052 Daucus carota HOM05D001841 ORTHO05D001767 3.5e-109 398.3 201 100.0
Gohir.D12G025300 Gossypium hirsutum HOM05D001841 ORTHO05D001767 9.6e-14 81.3 127 46.5
Manes.15G142400 Manihot esculenta HOM05D001841 ORTHO05D001767 1.3e-13 80.9 138 41.3
Gorai.008G025600 Gossypium raimondii HOM05D001841 ORTHO05D001767 2.8e-13 79.7 165 40.0
Lj9C359T11 Lonicera japonica HOM05D001841 ORTHO05D001767 4.8e-13 79.0 189 38.1
COL.COLO4_32685 Corchorus olitorius HOM05D001841 ORTHO05D001767 6.2e-13 78.6 210 36.2
Manes.17G093500 Manihot esculenta HOM05D001841 ORTHO05D001767 6.2e-13 78.6 137 43.1
Gohir.A12G025600 Gossypium hirsutum HOM05D001841 ORTHO05D001767 1.1e-12 77.8 273 32.2
Gohir.A13G039000 Gossypium hirsutum HOM05D001841 ORTHO05D001767 2.4e-12 76.6 156 36.5
Gorai.013G042200 Gossypium raimondii HOM05D001841 ORTHO05D001767 1.2e-11 74.3 156 36.5
DCAR_029024 Daucus carota HOM05D001841 ORTHO05D001767 2.0e-11 73.6 242 30.6
CDE10G1358 Ceratophyllum demersum HOM05D001841 ORTHO05D001767 2.6e-11 73.2 236 30.9
Cc02_g18570 Coffea canephora HOM05D001841 ORTHO05D001767 2.6e-11 73.2 112 44.6
MD10G1090600 Malus domestica HOM05D001841 ORTHO05D001767 2.6e-11 73.2 144 39.6
Duzib132G0939 Durio zibethinus HOM05D001841 ORTHO05D001767 3.4e-11 72.8 136 39.7
Gohir.D13G037500 Gossypium hirsutum HOM05D001841 ORTHO05D001767 3.4e-11 72.8 156 35.9
Thhalv10022784m.g Eutrema salsugineum HOM05D001841 ORTHO05D001767 4.5e-11 72.4 245 30.6
CDE10G1361 Ceratophyllum demersum HOM05D001841 ORTHO05D001767 5.8e-11 72.0 235 31.9
Duzib248G1481 Durio zibethinus HOM05D001841 ORTHO05D001767 5.8e-11 72.0 166 33.7
TAR376G0142 Trochodendron aralioides HOM05D001841 ORTHO05D001767 5.8e-11 72.0 231 31.2
CANSAT25G1334 Cannabis sativa HOM05D001841 ORTHO05D001767 7.6e-11 71.6 156 37.2
Cpa.g.sc62.35 Carica papaya HOM05D001841 ORTHO05D001767 7.6e-11 71.6 125 42.4
Rhsim05G0081500 Rhododendron simsii HOM05D001841 ORTHO05D001767 9.9e-11 71.2 136 35.3
Duzib052G0781 Durio zibethinus HOM05D001841 ORTHO05D001767 1.7e-10 70.5 136 39.7
CiPaw.06G142300 Carya illinoinensis HOM05D001841 ORTHO05D001767 2.2e-10 70.1 198 33.8
CiPaw.05G053900 Carya illinoinensis HOM05D001841 ORTHO05D001767 4.9e-10 68.9 258 29.8
QL11p037275 Quercus lobata HOM05D001841 ORTHO05D001767 4.9e-10 68.9 143 37.1
Lsat_1_v5_gn_9_110401 Lactuca sativa HOM05D001841 ORTHO05D001767 6.4e-10 68.6 249 30.1
vmacro19487 Vaccinium macrocarpon HOM05D001841 ORTHO05D001767 6.4e-10 68.6 133 36.1
Prupe.8G119300 Prunus persica HOM05D001841 ORTHO05D001767 8.4e-10 68.2 144 39.6
Thecc.02G097700 Theobroma cacao HOM05D001841 ORTHO05D001767 8.4e-10 68.2 170 32.9
Cfa005454 Carpinus fangiana HOM05D001841 ORTHO05D001767 1.4e-09 67.4 142 39.4
Atru.chr5.2772 Acer truncatum HOM05D001841 ORTHO05D001767 1.9e-09 67.0 274 29.6
Nitab4.5_0000557g0050 Nicotiana tabacum HOM05D001841 ORTHO05D001767 1.9e-09 67.0 211 34.6
Nitab4.5_0001413g0040 Nicotiana tabacum HOM05D001841 ORTHO05D001767 2.4e-09 66.6 221 30.3
Haze_01864 Corylus avellana HOM05D001841 ORTHO05D001767 3.2e-09 66.2 107 42.1
Lalb_Chr05g0219031 Lupinus albus HOM05D001841 ORTHO05D001767 3.2e-09 66.2 269 29.0
VMungo0251G0262 Vigna mungo HOM05D001841 ORTHO05D001767 3.2e-09 66.2 125 37.6
DCAR_029019 Daucus carota HOM05D001841 ORTHO05D001767 4.2e-09 65.9 199 31.7
PSO541G1997 Papaver somniferum HOM05D001841 ORTHO05D001767 4.2e-09 65.9 135 33.3
Sp3g29010 Schrenkiella parvula HOM05D001841 ORTHO05D001767 4.2e-09 65.9 242 31.8
BcaB03g16318 Brassica carinata HOM05D001841 ORTHO05D001767 5.4e-09 65.5 243 29.6
PSO675G9020 Papaver somniferum HOM05D001841 ORTHO05D001767 5.4e-09 65.5 135 33.3
Peaxi162Scf00684g00566 Petunia axillaris HOM05D001841 ORTHO05D001767 7.1e-09 65.1 102 42.2
Phvul.003G294400 Phaseolus vulgaris HOM05D001841 ORTHO05D001767 7.1e-09 65.1 147 37.4
SalBow6G4282 Salvia bowleyana HOM05D001841 ORTHO05D001767 7.1e-09 65.1 151 33.8
unitig_37.g12810 Utricularia gibba HOM05D001841 ORTHO05D001767 7.1e-09 65.1 148 32.4
AT2G15760 Arabidopsis thaliana HOM05D001841 ORTHO05D001767 9.3e-09 64.7 242 32.2
MSTRG.20139 Avicennia marina HOM05D001841 ORTHO05D001767 1.2e-08 64.3 153 35.3
DCAR_022057 Daucus carota HOM05D001841 ORTHO05D001767 1.2e-08 64.3 222 32.4
PSO170G0875 Papaver somniferum HOM05D001841 ORTHO05D001767 1.2e-08 64.3 106 37.7
CARHR106090 Cardamine hirsuta HOM05D001841 ORTHO05D001767 1.6e-08 63.9 246 31.3
CDE03G0088 Ceratophyllum demersum HOM05D000370 ORTHO05D001767 1.6e-08 63.9 163 33.1
MBI06_g08193_MAGBIO Magnolia biondii HOM05D001841 ORTHO05D001767 1.6e-08 63.9 256 28.5
vmacro04468 Vaccinium macrocarpon HOM05D001841 ORTHO05D001767 1.6e-08 63.9 143 34.3
BraA07t28298Z Brassica rapa HOM05D001841 ORTHO05D001767 2.1e-08 63.5 230 31.3
VMungo1215G0333 Vigna mungo HOM05D001841 ORTHO05D001767 2.1e-08 63.5 145 36.6
AL3G47510 Arabidopsis lyrata HOM05D001841 ORTHO05D001767 2.7e-08 63.2 239 31.8
CiPaw.16G048100 Carya illinoinensis HOM05D001841 ORTHO05D001767 2.7e-08 63.2 105 40.0
Ca_18656_v3 Cicer arietinum L. HOM05D001841 ORTHO05D001767 2.7e-08 63.2 252 29.0
Peaxi162Scf00016g01610 Petunia axillaris HOM05D001841 ORTHO05D001767 2.7e-08 63.2 217 31.8
BcaC06g36083 Brassica carinata HOM05D001841 ORTHO05D001767 3.5e-08 62.8 230 30.0
C07p08040 Brassica napus HOM05D001841 ORTHO05D001767 3.5e-08 62.8 230 30.0
BolC7t41221H Brassica oleracea HOM05D001841 ORTHO05D001767 3.5e-08 62.8 230 30.0
Glyma.07G177600 Glycine max HOM05D001841 ORTHO05D001767 3.5e-08 62.8 138 35.5
Phvul.003G012800 Phaseolus vulgaris HOM05D001841 ORTHO05D001767 3.5e-08 62.8 128 37.5
MSTRG.16762 Avicennia marina HOM05D001841 ORTHO05D001767 4.6e-08 62.4 156 37.2
Ciclev10028742m.g Citrus clementina HOM05D001841 ORTHO05D001767 6.0e-08 62.0 195 33.3
Dinv23581 Davidia involucrata HOM05D001841 ORTHO05D001767 6.0e-08 62.0 249 30.5
FAN06G1731 Fragaria x ananassa HOM05D001841 ORTHO05D001767 6.0e-08 62.0 170 32.9
Gohir.A01G006300 Gossypium hirsutum HOM05D001841 ORTHO05D001767 6.0e-08 62.0 254 31.1
Gorai.002G007300 Gossypium raimondii HOM05D001841 ORTHO05D001767 6.0e-08 62.0 246 31.7
MBI02_g21198_MAGBIO Magnolia biondii HOM05D001841 ORTHO05D001767 6.0e-08 62.0 143 32.9
Medtr1g033900 Medicago truncatula HOM05D001841 ORTHO05D001767 6.0e-08 62.0 138 35.5
Oeu007260.1 Olea europaea HOM05D001841 ORTHO05D001767 6.0e-08 62.0 148 34.5
THA.LOC104819587 Tarenaya hassleriana HOM05D001841 ORTHO05D001767 6.0e-08 62.0 150 32.0
CAN.G1166.17 Capsicum annuum HOM05D001841 ORTHO05D001767 7.9e-08 61.6 249 31.7
Ca_12459_v3 Cicer arietinum L. HOM05D001841 ORTHO05D001767 7.9e-08 61.6 202 31.7
Aqoxy5G01297 Aquilegia oxysepala HOM05D001841 ORTHO05D001767 1.0e-07 61.2 246 29.7
HanXRQChr03g0072211 Helianthus annuus HOM05D001841 ORTHO05D001767 1.0e-07 61.2 214 32.2
Psat6g095760 Pisum sativum HOM05D001841 ORTHO05D001767 1.0e-07 61.2 235 30.6
Potri.009G105400 Populus trichocarpa HOM05D001841 ORTHO05D001767 1.0e-07 61.2 112 42.0
Sabra09G0080500 Salix brachista HOM05D001841 ORTHO05D001767 1.0e-07 61.2 161 35.4
FAN27G1419 Fragaria x ananassa HOM05D001841 ORTHO05D001767 1.3e-07 60.8 165 33.3
Gohir.D01G006300 Gossypium hirsutum HOM05D001841 ORTHO05D001767 1.3e-07 60.8 131 39.7
RcHm_v2.0_Chr6g0258711 Rosa chinensis HOM05D001841 ORTHO05D001767 1.3e-07 60.8 153 35.9
Sabra04G0095000 Salix brachista HOM05D001841 ORTHO05D001767 1.3e-07 60.8 102 42.2
Actinidia12979 Actinidia chinensis HOM05D001841 ORTHO05D001767 1.8e-07 60.5 252 30.6
Nitab4.5_0000736g0050 Nicotiana tabacum HOM05D001841 ORTHO05D001767 1.8e-07 60.5 262 29.8
PGR142G1787 Punica granatum HOM05D001841 ORTHO05D001767 1.8e-07 60.5 147 32.7
Medtr4g086620 Medicago truncatula HOM05D001841 ORTHO05D001767 2.3e-07 60.1 257 27.6
Nitab4.5_0001413g0010 Nicotiana tabacum HOM05D001841 ORTHO05D001767 2.3e-07 60.1 248 29.4
Actinidia27944 Actinidia chinensis HOM05D000058 ORTHO05D001767 3.0e-07 59.7 90 42.2
Ca_12461_v3 Cicer arietinum L. HOM05D001841 ORTHO05D001767 3.0e-07 59.7 201 31.3
FAN12G0524 Fragaria x ananassa HOM05D001841 ORTHO05D001767 3.0e-07 59.7 164 34.1
FAN20G1156 Fragaria x ananassa HOM05D001841 ORTHO05D001767 3.0e-07 59.7 165 35.8
Nn5g30193 Nelumbo nucifera HOM05D001841 ORTHO05D001767 3.0e-07 59.7 282 25.9
Sopen12g006960 Solanum pennellii HOM05D001841 ORTHO05D001767 3.0e-07 59.7 176 31.2
PGSC0003DMG400025897 Solanum tuberosum HOM05D001841 ORTHO05D001767 3.0e-07 59.7 256 28.9
A09p10870 Brassica napus HOM05D001841 ORTHO05D001767 3.9e-07 59.3 255 28.6
BraA09t36727Z Brassica rapa HOM05D001841 ORTHO05D001767 3.9e-07 59.3 255 28.6
CSS0048284 Camellia sinensis var. sinensis HOM05D001841 ORTHO05D001767 3.9e-07 59.3 224 29.9
Carub.0003s2959 Capsella rubella HOM05D001841 ORTHO05D001767 3.9e-07 59.3 244 31.1
Oeu009759.1 Olea europaea HOM05D001841 ORTHO05D001767 3.9e-07 59.3 243 28.8
TPR.G11144 Trifolium pratense HOM05D001841 ORTHO05D001767 3.9e-07 59.3 133 35.3
Aqoxy6G01410 Aquilegia oxysepala HOM05D001841 ORTHO05D001767 5.1e-07 58.9 96 46.9
BcaB07g31782 Brassica carinata HOM05D001841 ORTHO05D001767 5.1e-07 58.9 236 27.5
FAN05G4268 Fragaria x ananassa HOM05D001841 ORTHO05D001767 5.1e-07 58.9 155 35.5
Glyma.20G010200 Glycine max HOM05D001841 ORTHO05D001767 5.1e-07 58.9 207 30.4
SGA_v2.0_scaffold32G13089 Striga asiatica HOM05D001841 ORTHO05D001767 5.1e-07 58.9 146 30.8
A09p10840 Brassica napus HOM05D001841 ORTHO05D001767 6.7e-07 58.5 139 33.8
Potri.004G143500 Populus trichocarpa HOM05D001841 ORTHO05D001767 6.7e-07 58.5 150 32.0
AUR62016627 Chenopodium quinoa HOM05D001841 ORTHO05D001767 8.7e-07 58.2 96 39.6
FvH4_2g06670 Fragaria vesca HOM05D001841 ORTHO05D001767 8.7e-07 58.2 155 34.8
FAN15G3466 Fragaria x ananassa HOM05D001841 ORTHO05D001767 8.7e-07 58.2 155 34.8
FAN21G2199 Fragaria x ananassa HOM05D001841 ORTHO05D001767 8.7e-07 58.2 162 33.3
FAN24G1402 Fragaria x ananassa HOM05D001841 ORTHO05D001767 8.7e-07 58.2 155 34.8
TWI56G0311 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 8.7e-07 58.2 108 38.9
TAR625G0113 Trochodendron aralioides HOM05D001841 ORTHO05D001767 8.7e-07 58.2 108 38.0
EL10Ac9g21828 Beta vulgaris HOM05D001841 ORTHO05D001767 1.1e-06 57.8 133 34.6
FAN03G2329 Fragaria x ananassa HOM05D001841 ORTHO05D001767 1.1e-06 57.8 163 33.1
FAN24G3445 Fragaria x ananassa HOM05D001841 ORTHO05D001767 1.1e-06 57.8 163 33.1
HanXRQChr04g0128301 Helianthus annuus HOM05D001841 ORTHO05D001767 1.1e-06 57.8 254 26.8
Oeu032237.1 Olea europaea HOM05D001841 ORTHO05D001767 1.1e-06 57.8 142 33.1
C09p12820 Brassica napus HOM05D001841 ORTHO05D001767 1.5e-06 57.4 253 28.1
BolC9t54171H Brassica oleracea HOM05D001841 ORTHO05D001767 1.5e-06 57.4 253 28.1
Cpa.g.sc376.7 Carica papaya HOM05D001841 ORTHO05D001767 1.5e-06 57.4 128 33.6
CsaV3_7G008710 Cucumis sativus L. HOM05D001841 ORTHO05D001767 1.5e-06 57.4 115 36.5
FAN23G1430 Fragaria x ananassa HOM05D001841 ORTHO05D001767 1.5e-06 57.4 163 33.1
Hma1.2p1_0370F.1_g138000 Hydrangea macrophylla HOM05D001841 ORTHO05D001767 1.5e-06 57.4 104 37.5
Rhsim07G0231600 Rhododendron simsii HOM05D001841 ORTHO05D001767 1.5e-06 57.4 144 31.9
PGSC0003DMG400015310 Solanum tuberosum HOM05D001841 ORTHO05D001767 1.5e-06 57.4 185 32.4
THA.LOC104807355 Tarenaya hassleriana HOM05D001841 ORTHO05D001767 1.5e-06 57.4 138 33.3
Actinidia29858 Actinidia chinensis HOM05D000370 ORTHO05D001366 1.9e-06 57.0 132 34.8
MELO3C018439.2 Cucumis melo HOM05D001841 ORTHO05D001767 1.9e-06 57.0 115 36.5
DCAR_020935 Daucus carota HOM05D001841 ORTHO05D001767 1.9e-06 57.0 140 34.3
Glyma.07G210700 Glycine max HOM05D001841 ORTHO05D001767 1.9e-06 57.0 148 33.8
Psat7g121880 Pisum sativum HOM05D001841 ORTHO05D001767 1.9e-06 57.0 226 29.2
BcaC04g23039 Brassica carinata HOM05D001841 ORTHO05D001767 2.5e-06 56.6 253 28.1
HanXRQChr16g0508701 Helianthus annuus HOM05D001841 ORTHO05D001767 2.5e-06 56.6 195 31.8
PSO017G5918 Papaver somniferum HOM05D001841 ORTHO05D001767 2.5e-06 56.6 147 32.0
QL02p006055 Quercus lobata HOM05D001841 ORTHO05D001767 2.5e-06 56.6 106 34.9
SalBow8G4159 Salvia bowleyana HOM05D001841 ORTHO05D001767 2.5e-06 56.6 126 34.9
Cfa018506 Carpinus fangiana HOM05D001841 ORTHO05D001767 3.3e-06 56.2 110 33.6
Haze_17570 Corylus avellana HOM05D001841 ORTHO05D001767 3.3e-06 56.2 105 35.2
Duzib116G0233 Durio zibethinus HOM05D001841 ORTHO05D001767 3.3e-06 56.2 122 32.8
Eucgr.G01494 Eucalyptus grandis HOM05D001841 ORTHO05D001767 3.3e-06 56.2 95 38.9
Lalb_Chr11g0062521 Lupinus albus HOM05D001841 ORTHO05D001767 3.3e-06 56.2 184 32.6
Oeu003301.1 Olea europaea HOM05D001841 ORTHO05D001767 3.3e-06 56.2 138 32.6
Sabra02G0100700 Salix brachista HOM05D001841 ORTHO05D001767 3.3e-06 56.2 144 34.0
DCAR_029023 Daucus carota HOM05D001841 ORTHO05D001767 4.3e-06 55.8 118 34.7
Lalb_Chr16g0384591 Lupinus albus HOM05D001841 ORTHO05D001767 4.3e-06 55.8 141 34.8
Solyc01g108440.2 Solanum lycopersicum HOM05D001841 ORTHO05D001767 4.3e-06 55.8 251 29.9
Thecc.08G013800 Theobroma cacao HOM05D001841 ORTHO05D001767 4.3e-06 55.8 159 31.4
TAR381G0762 Trochodendron aralioides HOM05D001841 ORTHO05D001767 4.3e-06 55.8 137 34.3
MSTRG.1330 Avicennia marina HOM05D001841 ORTHO05D001767 5.6e-06 55.5 138 34.1
CDE06G1867 Ceratophyllum demersum HOM05D000370 ORTHO05D001366 5.6e-06 55.5 165 30.9
DCAR_019469 Daucus carota HOM05D001841 ORTHO05D001767 5.6e-06 55.5 141 31.2
Nn1g05855 Nelumbo nucifera HOM05D001841 ORTHO05D001767 5.6e-06 55.5 103 39.8
Peaxi162Scf00684g00582 Petunia axillaris HOM05D001841 ORTHO05D001767 5.6e-06 55.5 189 28.6
Solyc10g045480.1 Solanum lycopersicum HOM05D001841 ORTHO05D001767 5.6e-06 55.5 113 37.2
Solyc12g013610.2 Solanum lycopersicum HOM05D001841 ORTHO05D001767 5.6e-06 55.5 196 28.6
Aa31LG8G13350 Aethionema arabicum HOM05D001841 ORTHO05D001767 7.4e-06 55.1 216 30.6
MD15G1087600 Malus domestica HOM05D001841 ORTHO05D001767 7.4e-06 55.1 116 30.2
Actinidia00458 Actinidia chinensis HOM05D001841 ORTHO05D001767 9.6e-06 54.7 251 29.1
A07p05070 Brassica napus HOM05D001841 ORTHO05D001767 9.6e-06 54.7 236 29.2
ECA247G0952 Erigeron canadensis HOM05D001841 ORTHO05D001767 9.6e-06 54.7 189 29.6
HanXRQChr16g0507771 Helianthus annuus HOM05D001841 ORTHO05D001767 9.6e-06 54.7 190 28.9
Prupe.1G441300 Prunus persica HOM05D001841 ORTHO05D001767 9.6e-06 54.7 122 35.2
TWI36G0039 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 9.6e-06 54.7 113 37.2
TWI75G0920 Tripterygium wilfordii HOM05D001841 ORTHO05D001767 9.6e-06 54.7 239 29.7


User provided reference genes

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