Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021989 Daucus carota HOM05D004451 ORTHO05D005177 1.4e-137 493.0 258 100.0
Oeu018597.1 Olea europaea HOM05D004451 ORTHO05D005177 3.4e-72 275.8 253 62.5
Dinv15761 Davidia involucrata HOM05D004451 ORTHO05D005177 7.6e-72 274.6 268 60.4
CANSAT25G0591 Cannabis sativa HOM05D004451 ORTHO05D005177 2.2e-71 273.1 257 61.5
CANSAT25G2876 Cannabis sativa HOM05D004451 ORTHO05D005177 2.2e-71 273.1 257 61.5
ECA234G3549 Erigeron canadensis HOM05D004451 ORTHO05D005177 2.2e-71 273.1 254 61.0
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla HOM05D004451 ORTHO05D005177 2.9e-71 272.7 265 60.8
Oeu010397.1 Olea europaea HOM05D004451 ORTHO05D005177 2.9e-71 272.7 214 66.8
Sed0001090 Sechium edule HOM05D004451 ORTHO05D005177 3.8e-71 272.3 262 59.9
Cc02_g19230 Coffea canephora HOM05D004451 ORTHO05D005177 1.9e-70 270.0 260 59.6
GSVIVG01003161001 Vitis vinifera HOM05D004451 ORTHO05D005177 2.4e-70 269.6 258 60.5
Glyma.10G261800 Glycine max HOM05D004451 ORTHO05D005177 3.2e-70 269.2 255 61.6
Thecc.02G107400 Theobroma cacao HOM05D004451 ORTHO05D005177 3.2e-70 269.2 176 76.1
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea HOM05D004451 ORTHO05D005177 4.2e-70 268.9 174 77.0
CSS0044080 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 5.4e-70 268.5 258 62.8
AUR62039084 Chenopodium quinoa HOM05D004451 ORTHO05D005177 5.4e-70 268.5 248 62.9
Lj5g0008999 Lotus japonicus HOM05D004451 ORTHO05D005177 7.1e-70 268.1 255 60.8
Phvul.007G040300 Phaseolus vulgaris HOM05D004451 ORTHO05D005177 7.1e-70 268.1 255 60.8
CSS0019678 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 9.3e-70 267.7 229 65.9
SalBow6G6827 Salvia bowleyana HOM05D004451 ORTHO05D005177 9.3e-70 267.7 256 62.5
Actinidia17478 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.6e-69 266.9 264 59.5
Ciclev10029016m.g Citrus clementina HOM05D004451 ORTHO05D005177 1.6e-69 266.9 252 61.9
Manes.07G069100 Manihot esculenta HOM05D004451 ORTHO05D005177 1.6e-69 266.9 180 76.1
VMungo0720G2723 Vigna mungo HOM05D004451 ORTHO05D005177 1.6e-69 266.9 257 59.9
MSTRG.20184 Avicennia marina HOM05D004451 ORTHO05D005177 2.7e-69 266.2 256 60.9
AUR62010302 Chenopodium quinoa HOM05D004451 ORTHO05D005177 2.7e-69 266.2 256 60.5
Actinidia00412 Actinidia chinensis HOM05D004451 ORTHO05D005177 3.5e-69 265.8 227 65.2
COL.COLO4_32599 Corchorus olitorius HOM05D004451 ORTHO05D005177 3.5e-69 265.8 256 60.9
Glyma.20G129100 Glycine max HOM05D004451 ORTHO05D005177 3.5e-69 265.8 255 60.4
CSS0017890 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 6.0e-69 265.0 265 60.4
Migut.B00385 Erythranthe guttata HOM05D004451 ORTHO05D005177 6.0e-69 265.0 254 60.2
HanXRQChr16g0514851 Helianthus annuus HOM05D004451 ORTHO05D005177 6.0e-69 265.0 182 75.3
Atru.chr5.2587 Acer truncatum HOM05D004451 ORTHO05D005177 7.9e-69 264.6 251 61.4
Prupe.8G134600 Prunus persica HOM05D004451 ORTHO05D005177 7.9e-69 264.6 258 59.7
SGA_v2.0_scaffold32G13039 Striga asiatica HOM05D004451 ORTHO05D005177 7.9e-69 264.6 188 73.4
Gohir.D13G042200 Gossypium hirsutum HOM05D004451 ORTHO05D005177 1.0e-68 264.2 166 78.9
Gorai.013G047100 Gossypium raimondii HOM05D004451 ORTHO05D005177 1.0e-68 264.2 166 78.9
Psat6g219200 Pisum sativum HOM05D004451 ORTHO05D005177 1.0e-68 264.2 224 65.2
PGR142G3187 Punica granatum HOM05D004451 ORTHO05D005177 1.0e-68 264.2 260 57.7
Sed0013348 Sechium edule HOM05D004451 ORTHO05D005177 1.0e-68 264.2 241 61.0
CsaV3_7G008120 Cucumis sativus L. HOM05D004451 ORTHO05D005177 1.3e-68 263.8 264 60.2
Lj9C321G12 Lonicera japonica HOM05D004451 ORTHO05D005177 1.3e-68 263.8 172 77.9
ClCG02G006310 Citrullus lanatus HOM05D004451 ORTHO05D005177 2.3e-68 263.1 272 59.2
Medtr1g107450 Medicago truncatula HOM05D004451 ORTHO05D005177 2.3e-68 263.1 251 61.0
TAR381G0562 Trochodendron aralioides HOM05D004451 ORTHO05D005177 2.3e-68 263.1 259 60.2
Actinidia05493 Actinidia chinensis HOM05D004451 ORTHO05D005177 3.9e-68 262.3 176 75.6
Nitab4.5_0005392g0030 Nicotiana tabacum HOM05D004451 ORTHO05D005177 5.1e-68 261.9 250 61.6
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea HOM05D004451 ORTHO05D005177 6.6e-68 261.5 265 59.2
Nitab4.5_0002815g0090 Nicotiana tabacum HOM05D004451 ORTHO05D005177 6.6e-68 261.5 254 63.0
Rhsim05G0088400 Rhododendron simsii HOM05D004451 ORTHO05D005177 6.6e-68 261.5 260 59.6
Duzib248G1610 Durio zibethinus HOM05D004451 ORTHO05D005177 1.1e-67 260.8 174 75.3
TWI31G0226 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 1.9e-67 260.0 257 59.9
Eucgr.E02954 Eucalyptus grandis HOM05D004451 ORTHO05D005177 2.5e-67 259.6 266 57.1
TWI79G0876 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 2.5e-67 259.6 237 62.4
Cpa.g.sc106.89 Carica papaya HOM05D004451 ORTHO05D005177 3.3e-67 259.2 215 65.1
Solyc01g107640.3 Solanum lycopersicum HOM05D004451 ORTHO05D005177 3.3e-67 259.2 250 61.2
Gohir.A13G043700 Gossypium hirsutum HOM05D004451 ORTHO05D005177 4.3e-67 258.8 248 59.7
Nn1g04705 Nelumbo nucifera HOM05D004451 ORTHO05D005177 4.3e-67 258.8 175 73.7
Sc17g0003020 Simmondsia chinensis HOM05D004451 ORTHO05D005177 5.6e-67 258.5 261 59.0
Aqoxy5G01146 Aquilegia oxysepala HOM05D004451 ORTHO05D005177 7.3e-67 258.1 249 59.8
EL10Ac9g22281 Beta vulgaris HOM05D004451 ORTHO05D005177 7.3e-67 258.1 253 59.3
Ca_11078_v3 Cicer arietinum L. HOM05D004451 ORTHO05D005177 7.3e-67 258.1 251 60.2
MELO3C018494.2 Cucumis melo HOM05D004451 ORTHO05D005177 7.3e-67 258.1 265 58.9
PSO170G0588 Papaver somniferum HOM05D004451 ORTHO05D005177 7.3e-67 258.1 207 65.2
Sopen01g049830 Solanum pennellii HOM05D004451 ORTHO05D005177 9.6e-67 257.7 250 60.8
Manes.10G076300 Manihot esculenta HOM05D004451 ORTHO05D005177 1.3e-66 257.3 260 58.5
Nn5g30419 Nelumbo nucifera HOM05D004451 ORTHO05D005177 1.3e-66 257.3 255 58.8
PGSC0003DMG400025865 Solanum tuberosum HOM05D004451 ORTHO05D005177 1.3e-66 257.3 250 61.6
TAR628G0195 Trochodendron aralioides HOM05D004451 ORTHO05D005177 1.3e-66 257.3 176 73.9
Potri.009G096300 Populus trichocarpa HOM05D004451 ORTHO05D005177 2.1e-66 256.5 256 58.6
RcHm_v2.0_Chr6g0255371 Rosa chinensis HOM05D004451 ORTHO05D005177 2.1e-66 256.5 254 57.5
QL11p033916 Quercus lobata HOM05D004451 ORTHO05D005177 3.6e-66 255.8 261 57.5
vmacro19448 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 3.6e-66 255.8 258 56.6
PSO210G2671 Papaver somniferum HOM05D004451 ORTHO05D005177 4.8e-66 255.4 250 59.2
Lalb_Chr06g0165471 Lupinus albus HOM05D004451 ORTHO05D005177 1.1e-65 254.2 209 65.6
BolC7t41261H Brassica oleracea HOM05D004451 ORTHO05D005177 1.4e-65 253.8 208 64.9
A07p05320 Brassica napus HOM05D004451 ORTHO05D005177 1.8e-65 253.4 205 64.9
BraA07t28325Z Brassica rapa HOM05D004451 ORTHO05D005177 1.8e-65 253.4 205 64.9
Lsat_1_v5_gn_5_114881 Lactuca sativa HOM05D004451 ORTHO05D005177 2.4e-65 253.1 251 61.4
Potri.001G300500 Populus trichocarpa HOM05D004451 ORTHO05D005177 2.4e-65 253.1 256 58.6
BcaC06g36051 Brassica carinata HOM05D004451 ORTHO05D005177 3.1e-65 252.7 208 64.9
C07p08470 Brassica napus HOM05D004451 ORTHO05D005177 3.1e-65 252.7 208 64.9
DCAR_001641 Daucus carota HOM05D004451 ORTHO05D005177 3.1e-65 252.7 157 80.9
BcaB03g16278 Brassica carinata HOM05D004451 ORTHO05D005177 4.0e-65 252.3 208 64.9
Aa31LG8G13140 Aethionema arabicum HOM05D004451 ORTHO05D005177 6.9e-65 251.5 251 57.8
Duzib132G0413 Durio zibethinus HOM05D004451 ORTHO05D005177 9.0e-65 251.1 256 58.2
MD05G1088600 Malus domestica HOM05D004451 ORTHO05D005177 9.0e-65 251.1 258 58.5
THA.LOC104819557 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 9.0e-65 251.1 240 59.2
Gorai.005G235200 Gossypium raimondii HOM05D004451 ORTHO05D005177 1.2e-64 250.8 255 56.9
Lalb_Chr02g0145321 Lupinus albus HOM05D004451 ORTHO05D005177 1.5e-64 250.4 166 77.7
Haze_10166 Corylus avellana HOM05D004451 ORTHO05D005177 2.0e-64 250.0 254 58.3
Gohir.A03G186500 Gossypium hirsutum HOM05D004451 ORTHO05D005177 2.0e-64 250.0 256 57.4
BcaB08g34587 Brassica carinata HOM05D004451 ORTHO05D005177 2.6e-64 249.6 192 67.2
Thhalv10022775m.g Eutrema salsugineum HOM05D004451 ORTHO05D005177 5.8e-64 248.4 192 67.2
Gohir.D02G207300 Gossypium hirsutum HOM05D004451 ORTHO05D005177 5.8e-64 248.4 256 56.2
FAN24G2858 Fragaria x ananassa HOM05D004451 ORTHO05D005177 9.9e-64 247.7 203 66.5
HanXRQChr10g0292341 Helianthus annuus HOM05D004451 ORTHO05D005177 9.9e-64 247.7 165 73.3
Cfa004574 Carpinus fangiana HOM05D004451 ORTHO05D005177 1.3e-63 247.3 254 58.3
Sp3g28570 Schrenkiella parvula HOM05D004451 ORTHO05D005177 1.3e-63 247.3 208 63.9
THA.LOC104807244 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 1.3e-63 247.3 183 67.8
AT2G15290 Arabidopsis thaliana HOM05D004451 ORTHO05D005177 1.7e-63 246.9 259 53.7
Hund06320 Selenicereus undatus HOM05D004451 ORTHO05D005177 2.2e-63 246.5 260 59.6
Hund00148 Selenicereus undatus HOM05D004451 ORTHO05D005177 3.8e-63 245.7 255 58.0
FAN20G1574 Fragaria x ananassa HOM05D004451 ORTHO05D005177 4.9e-63 245.4 259 57.5
Carub.0003s2912 Capsella rubella HOM05D004451 ORTHO05D005177 6.4e-63 245.0 256 57.0
Peaxi162Scf00016g02324 Petunia axillaris HOM05D004451 ORTHO05D005177 8.4e-63 244.6 250 58.0
ATR0691G207 Amborella trichopoda HOM05D004451 ORTHO05D005177 1.1e-62 244.2 215 62.3
CDE04G0259 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 1.4e-62 243.8 159 75.5
BcaB07g31794 Brassica carinata HOM05D004451 ORTHO05D005177 1.9e-62 243.4 207 63.8
MSTRG.16716 Avicennia marina HOM05D004451 ORTHO05D005177 2.4e-62 243.0 253 58.5
AL3G47010 Arabidopsis lyrata HOM05D004451 ORTHO05D005177 3.2e-62 242.7 259 53.3
CiPaw.05G011200 Carya illinoinensis HOM05D004451 ORTHO05D005177 3.2e-62 242.7 255 56.1
MD10G1096700 Malus domestica HOM05D004451 ORTHO05D005177 3.2e-62 242.7 254 59.4
CARHR105660 Cardamine hirsuta HOM05D004451 ORTHO05D005177 4.2e-62 242.3 257 55.6
FvH4_2g05240 Fragaria vesca HOM05D004451 ORTHO05D005177 4.2e-62 242.3 255 57.3
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 5.5e-62 241.9 212 62.3
FAN27G3473 Fragaria x ananassa HOM05D004451 ORTHO05D005177 5.5e-62 241.9 255 56.9
A09p10690 Brassica napus HOM05D004451 ORTHO05D005177 9.3e-62 241.1 207 62.8
SGA_v2.0_scaffold225G43078 Striga asiatica HOM05D004451 ORTHO05D005177 1.2e-61 240.7 229 62.4
BolC9t54158H Brassica oleracea HOM05D004451 ORTHO05D005177 1.6e-61 240.4 212 61.8
Ah.01g018220 Amaranthus hybridus HOM05D004451 ORTHO05D005177 4.6e-61 238.8 262 56.5
C09p12690 Brassica napus HOM05D004451 ORTHO05D005177 1.3e-60 237.3 207 62.8
CiPaw.06G169600 Carya illinoinensis HOM05D004451 ORTHO05D005177 1.3e-60 237.3 257 58.0
Rhsim11G0160300 Rhododendron simsii HOM05D004451 ORTHO05D005177 1.8e-60 236.9 154 76.6
FAN15G2242 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.3e-60 236.5 267 55.1
Sabra09G0074000 Salix brachista HOM05D004451 ORTHO05D005177 2.3e-60 236.5 307 49.2
Os02g0187600 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 8.7e-60 234.6 168 70.2
unitig_22.g5194 Utricularia gibba HOM05D004451 ORTHO05D005177 5.6e-59 231.9 208 62.0
SEGI_03021 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 1.6e-58 230.3 163 71.2
HPP92_004770 Vanilla planifolia HOM05D004451 ORTHO05D005177 2.8e-58 229.6 176 64.8
BcaC06g31580 Brassica carinata HOM05D004451 ORTHO05D005177 4.8e-58 228.8 155 75.5
vmacro19524 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 6.2e-58 228.4 293 49.5
Os06g0638100 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 1.4e-57 227.3 164 70.1
Sabra16G0188700 Salix brachista HOM05D004451 ORTHO05D005177 1.8e-57 226.9 318 47.2
Zm00001eb206410 Zea mays HOM05D004451 ORTHO05D005177 1.0e-55 221.1 152 72.4
Pp3c27_4260 Physcomitrium patens HOM05D004451 ORTHO05D005177 1.7e-55 220.3 240 51.7
Pp3c1_21740 Physcomitrium patens HOM05D004451 ORTHO05D005177 3.8e-55 219.2 164 65.9
ECA240G4367 Erigeron canadensis HOM05D004451 ORTHO05D005177 1.1e-54 217.6 251 55.0
Pp3c10_9500 Physcomitrium patens HOM05D004451 ORTHO05D005177 3.2e-54 216.1 237 50.6
Mapoly0049s0087 Marchantia polymorpha HOM05D004451 ORTHO05D005177 3.5e-53 212.6 176 63.6
BraA09t36712Z Brassica rapa HOM05D004451 ORTHO05D005177 1.8e-52 210.3 269 47.6
Zm00001eb387350 Zea mays HOM05D004451 ORTHO05D005177 8.7e-52 208.0 161 65.2
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis HOM05D004451 ORTHO05D005177 1.5e-51 207.2 188 55.3
unitig_8.g3679 Utricularia gibba HOM05D004451 ORTHO05D005177 8.2e-50 201.4 272 49.3
CDE06G1648 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 6.1e-45 185.3 212 51.9
SMO118G0560 Selaginella moellendorffii HOM05D004451 ORTHO05D005177 8.7e-44 181.4 157 59.2
CBR_g39267 Chara braunii HOM05D004451 ORTHO05D005177 2.8e-42 176.4 177 56.5
SHI05289 Sapria himalayana HOM05D004451 ORTHO05D005177 1.1e-38 164.5 159 55.3
CAN.G1231.10 Capsicum annuum HOM05D004451 ORTHO05D005177 5.9e-32 142.1 89 77.5
Zm00001eb234680 Zea mays HOM05D004451 ORTHO05D005177 2.5e-30 136.7 209 42.6
vmacro02006 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 9.4e-30 134.8 130 59.2
SEGI_11302 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 4.7e-29 132.5 95 68.4
MCO10G127 Micromonas commoda HOM05D004451 ORTHO05D005177 5.9e-24 115.5 182 40.1
Cre10.g454734 Chlamydomonas reinhardtii HOM05D000133 ORTHO05D005177 8.5e-23 111.7 180 37.8
HPP92_008279 Vanilla planifolia HOM05D004451 ORTHO05D005177 4.2e-22 109.4 123 52.0
TAR381G0937 Trochodendron aralioides HOM05D004451 ORTHO05D005177 5.5e-22 109.0 69 78.3
CBR_g28861 Chara braunii HOM05D004451 ORTHO05D009492 6.7e-20 102.1 87 58.6
HanXRQChr17g0567381 Helianthus annuus HOM05D004451 ORTHO05D005177 5.7e-19 99.0 63 77.8
HanXRQChr01g0018911 Helianthus annuus HOM05D004451 ORTHO05D005177 1.7e-18 97.4 63 76.2
PRCOL_00004645 Prasinoderma coloniale HOM05D004451 ORTHO05D005177 7.7e-16 88.6 159 36.5
HanXRQChr05g0151971 Helianthus annuus HOM05D002664 ORTHO05D002974 1.5e-11 74.3 42 83.3
Cre11.g467759 Chlamydomonas reinhardtii HOM05D027551 ORTHO05D005177 1.3e-10 71.2 196 30.1
VMungo0251G3374 Vigna mungo HOM05D004451 ORTHO05D005177 2.2e-07 60.5 78 51.3
CAN.G3385.1 Capsicum annuum HOM05D004451 ORTHO05D005177 7.2e-06 55.5 40 75.0


User provided reference genes

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