Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 1.2e-205 719.9 445 100.0
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 2.7e-40 170.6 344 40.7
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 1.7e-39 167.9 319 42.3
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.9e-38 164.5 272 45.2
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 2.5e-38 164.1 306 44.8
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 4.2e-38 163.3 341 39.6
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 8.0e-37 159.1 303 42.6
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 1.5e-35 154.8 323 39.9
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 1.7e-34 151.4 358 38.0
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 2.9e-34 150.6 343 39.9
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 4.9e-34 149.8 350 37.4
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 8.3e-34 149.1 338 37.9
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 2.0e-32 144.4 350 35.4
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 4.6e-32 143.3 363 37.7
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 4.6e-32 143.3 356 36.8
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 2.9e-31 140.6 353 36.5
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 3.9e-31 140.2 343 35.3
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 6.6e-31 139.4 313 40.6
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 1.1e-30 138.7 495 32.5
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 2.5e-30 137.5 351 36.8
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 7.3e-30 136.0 289 39.4
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 2.1e-29 134.4 349 33.5
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 4.7e-29 133.3 337 35.9
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 1.4e-28 131.7 242 40.5
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 5.2e-28 129.8 356 33.1
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 8.9e-28 129.0 290 39.0
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 1.5e-27 128.3 288 36.8
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 2.9e-26 124.0 318 34.6
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 1.1e-25 122.1 411 32.8
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 3.2e-25 120.6 322 35.1
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 7.0e-25 119.4 311 36.7
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 2.0e-24 117.9 311 36.3
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 2.0e-24 117.9 311 36.3
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 2.0e-24 117.9 318 33.0
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 6.0e-24 116.3 395 31.6
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 7.8e-24 115.9 366 32.8
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 8.6e-23 112.5 360 32.5
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 1.1e-22 112.1 340 32.9
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 1.1e-22 112.1 299 35.1
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 1.5e-22 111.7 296 35.8
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 3.3e-22 110.5 219 38.4
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 9.5e-22 109.0 326 33.1
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 1.2e-21 108.6 352 33.5
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 1.2e-21 108.6 333 32.4
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 1.6e-21 108.2 340 33.2
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 2.1e-21 107.8 333 32.4
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 2.1e-21 107.8 344 32.0
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 3.6e-21 107.1 317 35.6
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 4.7e-21 106.7 290 31.0
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 1.4e-20 105.1 368 31.5
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 1.8e-20 104.8 314 33.8
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 3.1e-20 104.0 326 31.9
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 6.8e-20 102.8 366 31.4
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 1.2e-19 102.1 328 31.7
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 1.2e-19 102.1 379 31.9
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.5e-19 101.7 312 34.6
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 2.6e-19 100.9 345 32.8
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 2.6e-19 100.9 340 32.4
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 2.6e-19 100.9 388 31.2
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 2.6e-19 100.9 372 30.1
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 3.4e-19 100.5 321 33.3
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 5.8e-19 99.8 275 34.2
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 7.5e-19 99.4 280 33.2
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 9.8e-19 99.0 347 32.3
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 9.8e-19 99.0 409 31.5
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 9.8e-19 99.0 312 32.4
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 1.3e-18 98.6 334 34.7
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 1.7e-18 98.2 326 31.6
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 1.4e-17 95.1 354 31.9
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 1.9e-17 94.7 226 37.6
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 2.4e-17 94.4 408 29.2
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 9.2e-17 92.4 331 30.5
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 2.3e-15 87.8 133 47.4
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 3.0e-15 87.4 352 30.7
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 5.1e-15 86.7 285 34.0
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 5.1e-15 86.7 265 29.1
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 1.5e-14 85.1 150 42.7
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 1.9e-14 84.7 395 28.6
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 2.5e-14 84.3 368 29.3
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 3.3e-14 84.0 435 27.1
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 1.6e-13 81.6 358 28.5
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 1.6e-13 81.6 278 32.0
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 1.6e-13 81.6 380 27.1
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 3.6e-13 80.5 141 44.0
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 6.2e-13 79.7 410 28.5
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 2.3e-12 77.8 296 30.7
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 5.2e-12 76.6 366 28.7
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 6.8e-12 76.3 192 39.6
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 8.9e-12 75.9 370 27.6
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 2.0e-11 74.7 424 27.6
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 2.6e-11 74.3 140 42.1
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 7.6e-11 72.8 154 39.0
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 9.9e-11 72.4 154 39.0
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.7e-10 71.6 167 37.7
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 2.9e-10 70.9 167 39.5
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 2.9e-10 70.9 291 28.2
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 1.4e-09 68.6 131 40.5
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 7.1e-09 66.2 239 28.0
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 2.1e-08 64.7 234 30.8
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 4.6e-08 63.5 127 37.8
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 4.6e-08 63.5 115 37.4
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 7.8e-08 62.8 341 28.2
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 1.3e-07 62.0 341 28.2
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.7e-07 61.6 517 25.3
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 3.0e-07 60.8 144 36.8
HanXRQChr11g0340671 Helianthus annuus HOM05D006297 ORTHO05D007873 3.9e-07 60.5 80 47.5
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 5.1e-07 60.1 240 28.3
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 8.6e-07 59.3 263 30.4
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 1.1e-06 58.9 531 26.2
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 1.5e-06 58.5 74 50.0
Lsat_1_v5_gn_5_169521 Lactuca sativa HOM05D006297 ORTHO05D007873 3.3e-06 57.4 291 28.2
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 4.3e-06 57.0 299 27.8
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 5.6e-06 56.6 301 27.2
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 5.6e-06 56.6 196 29.6
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 9.6e-06 55.8 251 27.9


User provided reference genes

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