Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014079 Daucus carota HOM05D004912 ORTHO05D006144 8.3e-49 196.8 106 100.0
DCAR_014078 Daucus carota HOM05D004912 ORTHO05D006144 2.8e-28 128.6 102 62.7
DCAR_024339 Daucus carota HOM05D004912 ORTHO05D006144 2.7e-23 112.1 103 58.3
Dinv41750 Davidia involucrata HOM05D004912 ORTHO05D006144 2.8e-12 75.5 116 40.5
Atru.chr13.2352 Acer truncatum HOM05D004912 ORTHO05D006144 4.4e-10 68.2 107 39.3
Migut.C01310 Erythranthe guttata HOM05D004912 ORTHO05D006144 1.7e-09 66.2 108 37.0
Manes.18G104400 Manihot esculenta HOM05D004912 ORTHO05D006144 1.1e-08 63.5 103 41.7
SGA_v2.0_scaffold118G32511 Striga asiatica HOM05D004912 ORTHO05D006144 1.4e-08 63.2 126 35.7
Haze_21297 Corylus avellana HOM05D004912 ORTHO05D006144 1.9e-08 62.8 109 39.4
vmacro00991 Vaccinium macrocarpon HOM05D004912 ORTHO05D006144 1.9e-08 62.8 100 38.0
Nitab4.5_0001378g0010 Nicotiana tabacum HOM05D004912 ORTHO05D006144 2.4e-08 62.4 117 39.3
Actinidia01557 Actinidia chinensis HOM05D004912 ORTHO05D006144 3.2e-08 62.0 103 38.8
ECA232G1825 Erigeron canadensis HOM05D004912 ORTHO05D006144 3.2e-08 62.0 106 37.7
PGSC0003DMG400031411 Solanum tuberosum HOM05D004912 ORTHO05D006144 3.2e-08 62.0 113 39.8
Ciclev10001073m.g Citrus clementina HOM05D004912 ORTHO05D006144 7.1e-08 60.8 108 38.0
Eucgr.F04115 Eucalyptus grandis HOM05D004912 ORTHO05D006144 7.1e-08 60.8 105 38.1
Glyma.12G001600 Glycine max HOM05D004912 ORTHO05D006144 9.2e-08 60.5 98 39.8
Cc10_g10040 Coffea canephora HOM05D004912 ORTHO05D006144 1.2e-07 60.1 113 38.9
Glyma.08G239400 Glycine max HOM05D004912 ORTHO05D006144 1.2e-07 60.1 98 43.9
Cfa012942 Carpinus fangiana HOM05D004912 ORTHO05D006144 1.6e-07 59.7 108 40.7
Aa31LG4G8550 Aethionema arabicum HOM05D004912 ORTHO05D006144 2.7e-07 58.9 97 38.1
Lsat_1_v5_gn_7_21041 Lactuca sativa HOM05D004912 ORTHO05D006144 2.7e-07 58.9 100 37.0
Lj3g0019671 Lotus japonicus HOM05D004912 ORTHO05D006144 2.7e-07 58.9 106 40.6
Nitab4.5_0007332g0020 Nicotiana tabacum HOM05D004912 ORTHO05D006144 2.7e-07 58.9 121 36.4
PGR102G1759 Punica granatum HOM05D004912 ORTHO05D006144 2.7e-07 58.9 125 34.4
EL10Ac1g00125 Beta vulgaris HOM05D004912 ORTHO05D006144 3.5e-07 58.5 123 34.1
Peaxi162Scf00154g00016 Petunia axillaris HOM05D004912 ORTHO05D006144 3.5e-07 58.5 123 35.8
QL02p026125 Quercus lobata HOM05D004912 ORTHO05D006144 3.5e-07 58.5 114 32.5
CDE06G1282 Ceratophyllum demersum HOM05D004912 ORTHO05D006144 4.6e-07 58.2 104 39.4
COL.COLO4_05030 Corchorus olitorius HOM05D004912 ORTHO05D006144 4.6e-07 58.2 112 34.8
Oeu059194.1 Olea europaea HOM05D004912 ORTHO05D006144 4.6e-07 58.2 106 37.7
ClCG11G008550 Citrullus lanatus HOM05D004912 ORTHO05D006144 7.8e-07 57.4 107 38.3
VMungo1127G0246 Vigna mungo HOM05D004912 ORTHO05D006144 7.8e-07 57.4 107 40.2
Lj4A484T8 Lonicera japonica HOM05D004912 ORTHO05D006144 1.3e-06 56.6 109 34.9
Phvul.011G001700 Phaseolus vulgaris HOM05D004912 ORTHO05D006144 1.3e-06 56.6 104 40.4
Nn5g27542 Nelumbo nucifera HOM05D004912 ORTHO05D006144 2.3e-06 55.8 123 33.3
Prupe.1G554000 Prunus persica HOM05D004912 ORTHO05D006144 2.3e-06 55.8 109 38.5
arahy.Tifrunner.gnm1.ann1.Z6QD6J Arachis hypogaea HOM05D004912 ORTHO05D006144 3.0e-06 55.5 116 37.1
arahy.Tifrunner.gnm1.ann1.NID8M3 Arachis hypogaea HOM05D004912 ORTHO05D006144 5.1e-06 54.7 117 34.2
AUR62022650 Chenopodium quinoa HOM05D004912 ORTHO05D006144 5.1e-06 54.7 119 32.8
Peaxi162Scf00798g00322 Petunia axillaris HOM05D004912 ORTHO05D006144 5.1e-06 54.7 111 36.0
Psat7g146280 Pisum sativum HOM05D004912 ORTHO05D006144 5.1e-06 54.7 117 35.0
Sabra13G0093000 Salix brachista HOM05D004912 ORTHO05D006144 5.1e-06 54.7 123 35.8
arahy.Tifrunner.gnm1.ann1.SX2JAI Arachis hypogaea HOM05D004912 ORTHO05D006144 8.6e-06 53.9 115 37.4
Nitab4.5_0006163g0010 Nicotiana tabacum HOM05D004912 ORTHO05D006144 8.6e-06 53.9 119 33.6


User provided reference genes

Program Settings