Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013986 Daucus carota HOM05D003821 ORTHO05D004449 1.2e-49 199.5 103 100.0
vmacro15236 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 7.3e-18 94.0 116 54.3
Nitab4.5_0004438g0100 Nicotiana tabacum HOM05D003821 ORTHO05D004449 9.6e-18 93.6 103 58.3
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 1.6e-17 92.8 104 59.6
Nitab4.5_0003546g0070 Nicotiana tabacum HOM05D003821 ORTHO05D004449 4.0e-16 88.2 117 52.1
CAN.G185.14 Capsicum annuum HOM05D003821 ORTHO05D004449 6.9e-16 87.4 102 54.9
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 1.2e-15 86.7 99 53.5
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 1.5e-15 86.3 101 54.5
vmacro08148 Vaccinium macrocarpon HOM05D003821 ORTHO05D004449 3.4e-15 85.1 152 44.7
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 5.8e-15 84.3 101 53.5
FAN07G0841 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.7e-14 82.8 101 51.5
Nitab4.5_0000191g0110 Nicotiana tabacum HOM05D003821 ORTHO05D004449 1.7e-14 82.8 115 52.2
SGA_v2.0_scaffold91G27999 Striga asiatica HOM05D003821 ORTHO05D004449 2.9e-14 82.0 122 47.5
Nitab4.5_0000570g0120 Nicotiana tabacum HOM05D003821 ORTHO05D004449 8.4e-14 80.5 104 49.0
Sabra08G0153500 Salix brachista HOM05D003821 ORTHO05D004449 8.4e-14 80.5 131 45.0
PGSC0003DMG400022856 Solanum tuberosum HOM05D003821 ORTHO05D004449 8.4e-14 80.5 118 47.5
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 2.4e-13 79.0 100 48.0
A03p49340 Brassica napus HOM05D003821 ORTHO05D004449 4.2e-13 78.2 99 47.5
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 9.3e-13 77.0 99 50.5
Hund20554 Selenicereus undatus HOM05D003821 ORTHO05D004449 1.2e-12 76.6 108 50.0
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 1.6e-12 76.3 99 49.5
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 1.6e-12 76.3 100 50.0
Rhsim04G0221500 Rhododendron simsii HOM05D003821 ORTHO05D004449 4.6e-12 74.7 143 41.3
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 6.0e-12 74.3 100 50.0
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 6.0e-12 74.3 98 51.0
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 7.8e-12 73.9 98 51.0
Cpa.g.sc9.208 Carica papaya HOM05D003821 ORTHO05D004449 1.0e-11 73.6 86 51.2
SGA_v2.0_scaffold147G36288 Striga asiatica HOM05D003821 ORTHO05D004449 1.0e-11 73.6 101 48.5
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 1.3e-11 73.2 100 48.0
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 1.7e-11 72.8 100 48.0
BraA01t02079Z Brassica rapa HOM05D000802 ORTHO05D013138 1.7e-11 72.8 104 50.0
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 1.7e-11 72.8 94 50.0
Aa31LG10G6300 Aethionema arabicum HOM05D003821 ORTHO05D004449 6.6e-11 70.9 126 42.9
Peaxi162Scf00048g00209 Petunia axillaris HOM05D003821 ORTHO05D004449 6.6e-11 70.9 94 45.7
Haze_01204 Corylus avellana HOM05D003821 ORTHO05D004449 8.7e-11 70.5 111 45.9
A08p11990 Brassica napus HOM05D003821 ORTHO05D004449 1.1e-10 70.1 101 47.5
Actinidia32231 Actinidia chinensis HOM05D003821 ORTHO05D004449 1.5e-10 69.7 101 47.5
VMungo1309G1076 Vigna mungo HOM05D003821 ORTHO05D004449 1.5e-10 69.7 91 47.3
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 4.3e-10 68.2 107 45.8
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 4.3e-10 68.2 91 44.0
SalBow2G1159 Salvia bowleyana HOM05D003821 ORTHO05D004449 4.3e-10 68.2 98 49.0
SGA_v2.0_scaffold428G51522 Striga asiatica HOM05D003821 ORTHO05D004449 4.3e-10 68.2 99 45.5
A01p21700 Brassica napus HOM05D000802 ORTHO05D013138 7.3e-10 67.4 101 48.5
TPR.G9594 Trifolium pratense HOM05D003821 ORTHO05D004449 7.3e-10 67.4 114 45.6
Atru.chr4.2835 Acer truncatum HOM05D003821 ORTHO05D004449 9.6e-10 67.0 135 40.7
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 1.3e-09 66.6 106 48.1
CSS0027872 Camellia sinensis var. sinensis HOM05D003821 ORTHO05D004449 1.3e-09 66.6 91 47.3
BcaC06g32965 Brassica carinata HOM05D003821 ORTHO05D004449 1.6e-09 66.2 94 45.7
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 1.6e-09 66.2 85 48.2
Sed0001615 Sechium edule HOM05D003821 ORTHO05D004449 1.6e-09 66.2 111 45.9
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 2.8e-09 65.5 101 45.5
arahy.Tifrunner.gnm1.ann1.LH51N9 Arachis hypogaea HOM05D003821 ORTHO05D004449 4.8e-09 64.7 106 46.2
QL10p053326 Quercus lobata HOM05D003821 ORTHO05D004449 4.8e-09 64.7 101 44.6
QL10p054532 Quercus lobata HOM05D003821 ORTHO05D004449 4.8e-09 64.7 101 44.6
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 6.2e-09 64.3 92 45.7
FAN12G1096 Fragaria x ananassa HOM05D003821 ORTHO05D004449 6.2e-09 64.3 100 44.0
BraA03t14035Z Brassica rapa HOM05D003821 ORTHO05D004449 8.1e-09 63.9 106 41.5
CAN.G484.32 Capsicum annuum HOM05D003821 ORTHO05D004449 8.1e-09 63.9 132 44.7
arahy.Tifrunner.gnm1.ann1.UD53LE Arachis hypogaea HOM05D003821 ORTHO05D004449 1.1e-08 63.5 100 47.0
BcaNung00244 Brassica carinata HOM05D000802 ORTHO05D013138 1.8e-08 62.8 100 44.0
DCAR_002813 Daucus carota HOM05D003821 ORTHO05D004449 1.8e-08 62.8 102 42.2
BcaC06g33446 Brassica carinata HOM05D003821 ORTHO05D004449 2.4e-08 62.4 94 45.7
BolC7t45268H Brassica oleracea HOM05D003821 ORTHO05D004449 2.4e-08 62.4 103 42.7
COL.COLO4_13871 Corchorus olitorius HOM05D003821 ORTHO05D004449 2.4e-08 62.4 99 43.4
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 3.1e-08 62.0 100 42.0
Medtr1g088760 Medicago truncatula HOM05D003821 ORTHO05D004449 3.1e-08 62.0 115 40.0
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 3.1e-08 62.0 105 43.8
C07p47410 Brassica napus HOM05D003821 ORTHO05D004449 5.3e-08 61.2 118 44.1
AUR62008616 Chenopodium quinoa HOM05D003821 ORTHO05D004449 5.3e-08 61.2 100 42.0
TAR362G0968 Trochodendron aralioides HOM05D003821 ORTHO05D004449 5.3e-08 61.2 104 44.2
Ah.04g153550 Amaranthus hybridus HOM05D003821 ORTHO05D004449 1.2e-07 60.1 106 45.3
FAN17G0959 Fragaria x ananassa HOM05D003821 ORTHO05D004449 1.2e-07 60.1 98 43.9
FAN15G2810 Fragaria x ananassa HOM05D003821 ORTHO05D004449 2.0e-07 59.3 91 42.9
FAN24G2279 Fragaria x ananassa HOM05D003821 ORTHO05D004449 2.0e-07 59.3 91 42.9
RcHm_v2.0_Chr4g0422221 Rosa chinensis HOM05D003821 ORTHO05D004449 2.0e-07 59.3 44 75.0
Ciclev10007067m.g Citrus clementina HOM05D003821 ORTHO05D004449 2.6e-07 58.9 128 35.2
Sc24g0003850 Simmondsia chinensis HOM05D000714 ORTHO05D000544 2.6e-07 58.9 96 41.7
ClCG09G006050 Citrullus lanatus HOM05D003821 ORTHO05D004449 3.4e-07 58.5 97 42.3
AUR62033168 Chenopodium quinoa HOM05D003821 ORTHO05D004449 4.5e-07 58.2 100 41.0
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 5.8e-07 57.8 107 39.3
Gorai.004G142200 Gossypium raimondii HOM05D003821 ORTHO05D004449 5.8e-07 57.8 130 40.0
FAN27G2508 Fragaria x ananassa HOM05D003821 ORTHO05D004449 7.6e-07 57.4 100 41.0
FAN20G2567 Fragaria x ananassa HOM05D000897 ORTHO05D000716 9.9e-07 57.0 91 41.8
Aa31LG8G3720 Aethionema arabicum HOM05D003821 ORTHO05D004449 1.3e-06 56.6 100 44.0
EL10Ac7g17441 Beta vulgaris HOM05D003821 ORTHO05D004449 1.3e-06 56.6 128 37.5
unitig_32.g10644 Utricularia gibba HOM05D003821 ORTHO05D004449 1.7e-06 56.2 37 81.1
BcaC07g37933 Brassica carinata HOM05D003821 ORTHO05D004449 2.2e-06 55.8 101 44.6
Thhalv10027508m.g Eutrema salsugineum HOM05D003821 ORTHO05D004449 2.2e-06 55.8 50 64.0
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 2.2e-06 55.8 96 44.8
Glyma.03G213100 Glycine max HOM05D003821 ORTHO05D004449 3.8e-06 55.1 48 64.6
Zm00001eb380410 Zea mays HOM05D003821 ORTHO05D004449 4.9e-06 54.7 47 66.0


User provided reference genes

Program Settings