Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 1.3e-109 399.8 208 100.0
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 8.6e-66 254.2 206 66.5
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 3.0e-63 245.7 199 66.3
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 6.8e-63 244.6 206 64.1
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 6.8e-63 244.6 206 64.1
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 1.5e-62 243.4 206 62.6
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 3.7e-61 238.8 206 62.6
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 3.1e-60 235.7 206 61.2
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 4.1e-60 235.3 206 60.2
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 9.2e-60 234.2 199 63.8
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 1.2e-59 233.8 199 62.8
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 1.0e-58 230.7 206 59.7
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 1.0e-58 230.7 207 60.4
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 1.0e-58 230.7 198 60.6
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 1.3e-58 230.3 198 60.1
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 1.3e-58 230.3 198 60.1
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 3.8e-58 228.8 206 59.2
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 3.8e-58 228.8 206 60.7
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 5.0e-58 228.4 206 59.2
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 6.6e-58 228.0 206 59.2
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 1.1e-57 227.3 206 60.7
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 1.5e-57 226.9 206 58.7
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 1.9e-57 226.5 206 57.8
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 5.6e-57 224.9 206 55.8
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 9.5e-57 224.2 206 57.8
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 6.1e-56 221.5 207 57.5
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 8.0e-56 221.1 198 60.6
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 8.0e-56 221.1 199 59.8
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 8.0e-56 221.1 206 58.3
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 3.1e-55 219.2 207 57.0
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 3.1e-55 219.2 212 58.5
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 5.2e-55 218.4 207 58.0
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 5.2e-55 218.4 207 56.5
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 1.5e-54 216.9 206 55.8
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 2.0e-54 216.5 174 64.9
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 5.8e-54 214.9 164 66.5
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 9.8e-54 214.2 207 57.5
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 1.3e-53 213.8 200 57.0
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 2.2e-53 213.0 198 58.6
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 1.1e-52 210.7 199 59.8
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 1.4e-52 210.3 195 59.5
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 5.4e-52 208.4 206 55.8
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 1.6e-51 206.8 206 54.4
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 2.0e-51 206.5 206 53.9
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.0e-51 206.5 206 53.9
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.7e-51 206.1 199 58.3
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 4.6e-51 205.3 206 54.9
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 6.0e-51 204.9 198 56.6
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 6.0e-51 204.9 206 54.4
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 7.8e-51 204.5 206 54.4
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 7.8e-51 204.5 199 55.3
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 1.0e-50 204.1 200 56.0
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 1.0e-50 204.1 206 53.9
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 1.3e-50 203.8 206 53.9
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 2.3e-50 203.0 198 55.1
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.3e-50 203.0 198 55.1
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 2.3e-50 203.0 206 53.9
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 3.0e-50 202.6 206 54.4
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 8.6e-50 201.1 212 53.3
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 1.5e-49 200.3 245 47.8
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.5e-49 199.5 206 55.8
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 4.3e-49 198.7 199 56.3
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 5.6e-49 198.4 248 47.6
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 7.3e-49 198.0 206 54.4
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 9.5e-49 197.6 206 53.4
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 2.8e-48 196.1 198 56.1
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 2.8e-48 196.1 207 52.7
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 4.7e-48 195.3 207 53.1
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 1.4e-47 193.7 199 53.3
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.8e-47 193.4 206 50.5
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 1.8e-47 193.4 200 53.0
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 2.3e-47 193.0 200 51.0
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 3.1e-47 192.6 206 50.5
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 4.0e-47 192.2 206 50.5
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 5.2e-47 191.8 212 50.9
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 1.3e-45 187.2 248 46.0
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 2.2e-45 186.4 198 50.5
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 3.2e-44 182.6 163 60.7
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 1.2e-43 180.6 206 50.0
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 4.6e-43 178.7 206 47.6
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 4.6e-43 178.7 206 49.5
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 6.0e-43 178.3 206 47.6
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 1.0e-42 177.6 206 47.6
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 1.0e-42 177.6 206 48.1
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 6.6e-42 174.9 206 47.1
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 1.5e-41 173.7 180 51.1
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 5.6e-41 171.8 206 46.1
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 7.3e-41 171.4 206 44.2
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 1.6e-40 170.2 206 46.1
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 1.6e-40 170.2 211 43.6
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 1.4e-39 167.2 181 53.0
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 1.4e-39 167.2 163 56.4
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 1.8e-39 166.8 206 46.1
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 1.3e-37 160.6 200 48.5
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 9.2e-36 154.5 169 52.7
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 3.5e-35 152.5 153 54.9
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 6.0e-35 151.8 195 43.6
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 1.7e-34 150.2 203 42.4
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 5.6e-33 145.2 199 42.7
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 3.1e-31 139.4 129 55.0
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 3.1e-31 139.4 146 56.2
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 4.0e-31 139.0 152 52.6
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 9.9e-30 134.4 207 39.6
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 9.9e-30 134.4 144 52.8
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 3.8e-29 132.5 114 64.0
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 3.8e-29 132.5 156 43.6
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 8.4e-29 131.3 153 49.0
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 6.6e-26 121.7 124 56.5
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 4.3e-25 119.0 110 55.5
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 7.3e-25 118.2 123 55.3
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 5.3e-23 112.1 104 59.6
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 1.2e-22 110.9 84 69.0
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 9.9e-22 107.8 83 66.3
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 3.8e-21 105.9 194 33.5
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 2.4e-20 103.2 164 39.0
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 2.7e-19 99.8 123 49.6
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 1.3e-18 97.4 198 31.8
RcHm_v2.0_Chr3g0481391 Rosa chinensis HOM05D006640 ORTHO05D008078 1.6e-16 90.5 84 53.6
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 1.5e-14 84.0 62 67.7
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 4.5e-14 82.4 115 40.9
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 7.1e-12 75.1 121 38.0
vmacro03672 Vaccinium macrocarpon HOM05D002991 ORTHO05D003480 1.3e-10 70.9 46 69.6
FvH4_6g22960 Fragaria vesca HOM05D006640 ORTHO05D008078 7.4e-09 65.1 87 43.7
Phvul.006G060400 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 9.9e-06 54.7 45 55.6


User provided reference genes

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