Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013878 Daucus carota HOM05D003905 ORTHO05D005329 0.0e+00 1626.7 930 100.0
DCAR_016728 Daucus carota HOM05D003905 ORTHO05D005329 8.2e-201 704.9 950 48.6
DCAR_013879 Daucus carota HOM05D003905 ORTHO05D005329 1.7e-193 680.6 940 51.7
Dinv39531 Davidia involucrata HOM05D003905 ORTHO05D005329 3.1e-115 420.6 956 35.5
CSS0039596 Camellia sinensis var. sinensis HOM05D003905 ORTHO05D005329 9.3e-112 409.1 586 45.2
COL.COLO4_26128 Corchorus olitorius HOM05D003905 ORTHO05D005329 7.6e-98 362.8 560 42.1
Thecc.08G046500 Theobroma cacao HOM05D003905 ORTHO05D005329 1.9e-96 358.2 561 42.1
Cc10_g01500 Coffea canephora HOM05D003905 ORTHO05D005329 1.0e-94 352.4 578 43.3
Ciclev10000122m.g Citrus clementina HOM05D003905 ORTHO05D005329 3.3e-93 347.4 566 41.3
Duzib041G0770 Durio zibethinus HOM05D003905 ORTHO05D005329 3.7e-92 344.0 566 42.6
Dinv31863 Davidia involucrata HOM05D003905 ORTHO05D005329 1.1e-91 342.4 928 32.9
Gohir.D05G188500 Gossypium hirsutum HOM05D003905 ORTHO05D005329 5.9e-90 336.7 572 40.0
Lj4C798T8 Lonicera japonica HOM05D003905 ORTHO05D005329 7.7e-90 336.3 586 40.8
Actinidia16997 Actinidia chinensis HOM05D003905 ORTHO05D005329 2.2e-89 334.7 575 40.7
PGSC0003DMG400029336 Solanum tuberosum HOM05D003905 ORTHO05D005329 6.5e-89 333.2 557 39.7
Gorai.009G193800 Gossypium raimondii HOM05D003905 ORTHO05D005329 1.1e-88 332.4 572 39.7
Nitab4.5_0000337g0040 Nicotiana tabacum HOM05D003905 ORTHO05D005329 1.4e-88 332.0 553 40.0
Duzib093G0852 Durio zibethinus HOM05D003905 ORTHO05D005329 7.2e-88 329.7 553 40.7
Sopen12g031180 Solanum pennellii HOM05D003905 ORTHO05D005329 2.7e-87 327.8 554 39.7
Cfa013971 Carpinus fangiana HOM05D003905 ORTHO05D005329 7.9e-87 326.2 555 42.0
Hma1.2p1_0023F.1_g015570 Hydrangea macrophylla HOM05D003905 ORTHO05D005329 1.4e-86 325.5 568 40.7
Nitab4.5_0005970g0010 Nicotiana tabacum HOM05D003905 ORTHO05D005329 1.1e-85 322.4 565 40.4
QL02p011991 Quercus lobata HOM05D003905 ORTHO05D005329 2.0e-85 321.6 579 40.9
Atru.chr13.267 Acer truncatum HOM05D003905 ORTHO05D005329 3.3e-85 320.9 953 33.6
Manes.18G012100 Manihot esculenta HOM05D003905 ORTHO05D005329 1.7e-84 318.5 567 40.7
CiPaw.08G067200 Carya illinoinensis HOM05D003905 ORTHO05D005329 2.8e-84 317.8 560 39.8
Peaxi162Scf00553g00071 Petunia axillaris HOM05D003905 ORTHO05D005329 2.4e-83 314.7 559 39.9
Duzib116G0388 Durio zibethinus HOM05D003905 ORTHO05D005329 6.9e-83 313.2 561 40.8
CAN.G1925.3 Capsicum annuum HOM05D003905 ORTHO05D005329 1.0e-81 309.3 558 38.7
Phvul.009G009400 Phaseolus vulgaris HOM05D003905 ORTHO05D005329 2.2e-81 308.1 552 40.6
Potri.005G241400 Populus trichocarpa HOM05D003905 ORTHO05D005329 2.9e-81 307.8 556 40.3
TAR376G0902 Trochodendron aralioides HOM05D003905 ORTHO05D005329 3.8e-81 307.4 573 39.8
Glyma.17G258900 Glycine max HOM05D003905 ORTHO05D005329 5.0e-81 307.0 560 39.6
Nitab4.5_0003251g0050 Nicotiana tabacum HOM05D003905 ORTHO05D005329 8.5e-81 306.2 552 39.9
Glyma.04G023600 Glycine max HOM05D003905 ORTHO05D005329 1.9e-80 305.1 557 38.8
Potri.002G020000 Populus trichocarpa HOM05D003905 ORTHO05D005329 1.9e-80 305.1 573 39.6
Manes.05G145700 Manihot esculenta HOM05D003905 ORTHO05D005329 4.2e-80 303.9 569 40.6
Lj5g0002583 Lotus japonicus HOM05D003905 ORTHO05D005329 7.2e-80 303.1 571 39.4
Oeu014169.1 Olea europaea HOM05D003905 ORTHO05D005329 7.2e-80 303.1 560 40.2
TPR.G26376 Trifolium pratense HOM05D003905 ORTHO05D005329 1.6e-79 302.0 554 39.2
Gorai.010G002900 Gossypium raimondii HOM05D003905 ORTHO05D005329 2.1e-79 301.6 542 38.7
TWI56G0857 Tripterygium wilfordii HOM05D003905 ORTHO05D005329 2.1e-79 301.6 570 39.5
Gohir.D06G005700 Gossypium hirsutum HOM05D003905 ORTHO05D005329 3.6e-79 300.8 542 38.9
Gohir.A06G002700 Gossypium hirsutum HOM05D003905 ORTHO05D005329 4.7e-79 300.4 542 38.2
CiPaw.07G148100 Carya illinoinensis HOM05D003905 ORTHO05D005329 7.9e-79 299.7 558 39.6
Sabra05G0186900 Salix brachista HOM05D003905 ORTHO05D005329 5.1e-78 297.0 555 40.5
Lj4C22T7 Lonicera japonica HOM05D003905 ORTHO05D005329 3.3e-77 294.3 565 39.5
Oeu061973.1 Olea europaea HOM05D003905 ORTHO05D005329 3.3e-77 294.3 560 39.5
Sabra02G0016300 Salix brachista HOM05D003905 ORTHO05D005329 3.3e-77 294.3 571 38.9
Glyma.06G023600 Glycine max HOM05D003905 ORTHO05D005329 4.4e-77 293.9 553 37.6
MSTRG.22343 Avicennia marina HOM05D003905 ORTHO05D005329 9.7e-77 292.7 560 39.3
Lj5g0020561 Lotus japonicus HOM05D003905 ORTHO05D005329 9.7e-77 292.7 559 38.8
VMungo1309G0723 Vigna mungo HOM05D003905 ORTHO05D005329 9.7e-77 292.7 562 39.1
Phvul.001G005400 Phaseolus vulgaris HOM05D003905 ORTHO05D005329 2.2e-76 291.6 557 38.6
Prupe.1G363500 Prunus persica HOM05D003905 ORTHO05D005329 4.1e-75 287.3 574 38.0
FvH4_2g38250 Fragaria vesca HOM05D003905 ORTHO05D005329 5.3e-75 287.0 562 39.9
Solyc12g089320.3 Solanum lycopersicum HOM05D003905 ORTHO05D005329 9.1e-75 286.2 554 37.2
Migut.N03170 Erythranthe guttata HOM05D003905 ORTHO05D005329 1.5e-74 285.4 565 39.5
FAN20G1912 Fragaria x ananassa HOM05D003905 ORTHO05D005329 2.0e-74 285.0 562 39.3
RcHm_v2.0_Chr6g0303121 Rosa chinensis HOM05D003905 ORTHO05D005329 5.9e-74 283.5 559 39.0
TWI36G1438 Tripterygium wilfordii HOM05D003905 ORTHO05D005329 1.7e-73 282.0 568 38.4
VMungo0647G0001 Vigna mungo HOM05D003905 ORTHO05D005329 1.7e-73 282.0 562 38.8
MSTRG.24238 Avicennia marina HOM05D003905 ORTHO05D005329 2.2e-73 281.6 558 38.5
Psat6g002200 Pisum sativum HOM05D003905 ORTHO05D005329 2.2e-73 281.6 554 37.5
CANSAT25G2239 Cannabis sativa HOM05D003905 ORTHO05D005329 8.5e-73 279.6 559 38.5
TWI12G0098 Tripterygium wilfordii HOM05D003905 ORTHO05D005329 1.1e-72 279.3 568 37.7
MSTRG.25260 Avicennia marina HOM05D003905 ORTHO05D005329 3.2e-72 277.7 566 38.0
Glyma.14G219900 Glycine max HOM05D003905 ORTHO05D005329 4.2e-72 277.3 557 38.1
Medtr1g025500 Medicago truncatula HOM05D003905 ORTHO05D005329 1.6e-71 275.4 565 37.3
TAR381G0315 Trochodendron aralioides HOM05D003905 ORTHO05D005329 2.7e-71 274.6 580 35.9
TAR381G1218 Trochodendron aralioides HOM05D003905 ORTHO05D005329 1.4e-70 272.3 579 35.6
ClCG05G018200 Citrullus lanatus HOM05D003905 ORTHO05D005329 2.3e-70 271.6 578 38.1
Ca_13435_v3 Cicer arietinum L. HOM05D003905 ORTHO05D005329 3.9e-70 270.8 540 37.4
MELO3C003744.2 Cucumis melo HOM05D003905 ORTHO05D005329 2.0e-69 268.5 571 37.3
Lalb_Chr11g0061811 Lupinus albus HOM05D003905 ORTHO05D005329 3.3e-69 267.7 579 36.4
CsaV3_3G045950 Cucumis sativus L. HOM05D003905 ORTHO05D005329 6.3e-68 263.5 568 37.9
MD15G1010900 Malus domestica HOM05D003905 ORTHO05D005329 1.4e-67 262.3 561 36.4
Rhsim06G0019800 Rhododendron simsii HOM05D003905 ORTHO05D005329 3.1e-67 261.2 594 38.0
Sed0006884 Sechium edule HOM05D003905 ORTHO05D005329 5.9e-66 256.9 569 37.1
TAR625G1519 Trochodendron aralioides HOM05D003905 ORTHO05D005329 5.9e-66 256.9 531 37.1
Lalb_Chr23g0266101 Lupinus albus HOM05D003905 ORTHO05D005329 1.0e-65 256.1 562 37.2
Sc15g0004870 Simmondsia chinensis HOM05D003905 ORTHO05D005329 2.2e-65 255.0 564 36.2
Oeu046285.1 Olea europaea HOM05D003905 ORTHO05D005329 8.5e-65 253.1 558 36.7
Lalb_Chr08g0246181 Lupinus albus HOM05D003905 ORTHO05D005329 1.5e-64 252.3 565 36.3
MD08G1010900 Malus domestica HOM05D003905 ORTHO05D005329 1.5e-64 252.3 562 35.4
Gohir.A05G185700 Gossypium hirsutum HOM05D003905 ORTHO05D005329 4.0e-62 244.2 408 40.7
Eucgr.H00969 Eucalyptus grandis HOM05D003905 ORTHO05D005329 1.3e-60 239.2 569 35.9
SalBow7G0836 Salvia bowleyana HOM05D003905 ORTHO05D005329 1.4e-59 235.7 557 35.9
EL10Ac1g02168 Beta vulgaris HOM05D003905 ORTHO05D005329 3.1e-59 234.6 571 34.5
AUR62040550 Chenopodium quinoa HOM05D003905 ORTHO05D005329 9.1e-59 233.0 562 34.2
AUR62035030 Chenopodium quinoa HOM05D003905 ORTHO05D005329 1.6e-58 232.3 559 34.0
PSO675G3234 Papaver somniferum HOM05D003905 ORTHO05D005329 1.1e-56 226.1 575 34.4
PSO541G2778 Papaver somniferum HOM05D003905 ORTHO05D005329 1.2e-55 222.6 575 34.6
unitig_22.g6796 Utricularia gibba HOM05D003905 ORTHO05D005329 1.2e-55 222.6 593 35.9
Sed0012955 Sechium edule HOM05D003905 ORTHO05D005329 1.6e-55 222.2 533 36.2
Oeu054487.1 Olea europaea HOM05D003905 ORTHO05D005329 2.1e-55 221.9 544 35.3
MBI05_g23390_MAGBIO Magnolia biondii HOM05D003905 ORTHO05D005329 6.1e-55 220.3 589 34.3
Oeu001044.1 Olea europaea HOM05D003905 ORTHO05D005329 7.5e-53 213.4 560 34.3
unitig_8.g3383 Utricularia gibba HOM05D003905 ORTHO05D005329 2.2e-52 211.8 571 35.4
GSVIVG01024041001 Vitis vinifera HOM05D003905 ORTHO05D005329 1.1e-51 209.5 552 32.4
Sabra13G0112200 Salix brachista HOM05D003905 ORTHO05D005329 7.7e-50 203.4 358 40.2
Nn5g30748 Nelumbo nucifera HOM05D003905 ORTHO05D005329 1.7e-49 202.2 497 35.0
Nn6g32019 Nelumbo nucifera HOM05D003905 ORTHO05D005329 1.4e-46 192.6 452 34.7
ECA238G1952 Erigeron canadensis HOM05D003905 ORTHO05D005329 2.3e-46 191.8 574 30.8
RhsimUnG0065300 Rhododendron simsii HOM05D003905 ORTHO05D005329 6.8e-46 190.3 552 33.2
Ah.11g039850 Amaranthus hybridus HOM05D003905 ORTHO05D005329 1.4e-43 182.6 564 31.4
AT4G24200 Arabidopsis thaliana HOM05D003905 ORTHO05D005329 1.8e-43 182.2 571 32.9
THA.LOC104806874 Tarenaya hassleriana HOM05D003905 ORTHO05D005329 2.4e-43 181.8 566 34.1
Cpa.g.sc26.312 Carica papaya HOM05D003905 ORTHO05D005329 4.1e-43 181.0 310 42.6
Thhalv10027094m.g Eutrema salsugineum HOM05D003905 ORTHO05D005329 7.0e-43 180.3 562 33.6
Carub.0007s1689 Capsella rubella HOM05D003905 ORTHO05D005329 5.9e-42 177.2 569 33.0
AL7G29080 Arabidopsis lyrata HOM05D003905 ORTHO05D005329 8.6e-41 173.3 575 32.2
Lsat_1_v5_gn_0_1320 Lactuca sativa HOM05D003905 ORTHO05D005329 2.1e-39 168.7 554 32.7
GSVIVG01009936001 Vitis vinifera HOM05D003905 ORTHO05D005329 2.1e-39 168.7 287 39.4
HanXRQChr14g0431231 Helianthus annuus HOM05D003905 ORTHO05D005329 2.8e-39 168.3 566 30.0
ATR1134G065 Amborella trichopoda HOM05D003905 ORTHO05D005329 1.0e-38 166.4 598 29.9
Migut.C00854 Erythranthe guttata HOM05D003905 ORTHO05D005329 1.0e-38 166.4 557 32.0
Aqoxy5G01812 Aquilegia oxysepala HOM05D003905 ORTHO05D005329 3.1e-38 164.9 556 32.4
A03p55230 Brassica napus HOM05D003905 ORTHO05D005329 1.2e-37 162.9 559 31.7
BraA03t14582Z Brassica rapa HOM05D003905 ORTHO05D005329 1.2e-37 162.9 559 31.7
C07p53520 Brassica napus HOM05D003905 ORTHO05D005329 3.4e-37 161.4 560 31.8
A03p55210 Brassica napus HOM05D003905 ORTHO05D005329 4.4e-37 161.0 567 31.7
BraA03t14580Z Brassica rapa HOM05D003905 ORTHO05D005329 4.4e-37 161.0 567 31.7
PSO170G1273 Papaver somniferum HOM05D003905 ORTHO05D005329 4.4e-37 161.0 548 30.5
BolC7t45844H Brassica oleracea HOM05D003905 ORTHO05D005329 7.5e-37 160.2 554 31.9
PSO700G0319 Papaver somniferum HOM05D003905 ORTHO05D005329 9.8e-37 159.8 549 30.8
CARHR231610 Cardamine hirsuta HOM05D003905 ORTHO05D005329 2.2e-36 158.7 472 34.5
TAR628G1379 Trochodendron aralioides HOM05D003905 ORTHO05D005329 1.4e-35 156.0 275 42.2
Actinidia15434 Actinidia chinensis HOM05D003905 ORTHO05D005329 3.2e-35 154.8 255 40.4
MBI09_g14157_MAGBIO Magnolia biondii HOM05D003905 ORTHO05D005329 2.0e-34 152.1 565 31.5
Sp7g22170 Schrenkiella parvula HOM05D003905 ORTHO05D005329 2.0e-34 152.1 565 32.0
BcaC06g32891 Brassica carinata HOM05D003905 ORTHO05D005329 3.9e-33 147.9 560 31.4
BolC7t45837H Brassica oleracea HOM05D003905 ORTHO05D005329 1.5e-32 146.0 567 31.6
C07p53430 Brassica napus HOM05D003905 ORTHO05D005329 2.5e-32 145.2 566 31.8
THA.LOC104814731 Tarenaya hassleriana HOM05D003905 ORTHO05D005329 2.0e-29 135.6 403 33.0
TAR624G0280 Trochodendron aralioides HOM05D003905 ORTHO05D011420 9.8e-29 133.3 460 28.9
TAR624G1117 Trochodendron aralioides HOM05D003905 ORTHO05D011420 1.3e-28 132.9 439 30.3
ECA232G5024 Erigeron canadensis HOM05D003905 ORTHO05D005329 4.9e-28 131.0 607 29.0
PGR083G2535 Punica granatum HOM05D003905 ORTHO05D005329 1.4e-27 129.4 563 30.0
TAR628G0881 Trochodendron aralioides HOM05D003905 ORTHO05D005329 1.9e-27 129.0 273 35.9
Zm00001eb228940 Zea mays HOM05D003905 ORTHO05D005329 5.4e-27 127.5 551 29.6
HanXRQChr06g0184651 Helianthus annuus HOM05D003905 ORTHO05D005329 6.0e-26 124.0 571 26.8
TAR381G0253 Trochodendron aralioides HOM05D003905 ORTHO05D011420 1.7e-25 122.5 603 27.2
Os06g0631300 Oryza sativa ssp. japonica HOM05D003905 ORTHO05D005329 3.9e-25 121.3 572 29.4
CDE04G0614 Ceratophyllum demersum HOM05D003905 ORTHO05D005329 1.9e-24 119.0 588 28.9
QL12p004280 Quercus lobata HOM05D003905 ORTHO05D005329 8.9e-22 110.2 135 47.4
ATR0579G136 Amborella trichopoda HOM05D003905 ORTHO05D005329 3.4e-21 108.2 554 28.3
SEGI_23721 Sequoiadendron giganteum HOM05D003905 ORTHO05D005329 4.9e-20 104.4 608 26.2
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 4.1e-19 101.3 190 41.6
CDE02G0563 Ceratophyllum demersum HOM05D003905 ORTHO05D005329 1.7e-17 95.9 491 29.3
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.8e-12 78.2 118 42.4
SGA_v2.0_scaffold390G50586 Striga asiatica HOM05D003905 ORTHO05D005329 4.2e-11 74.7 450 26.7
FAN18G0158 Fragaria x ananassa HOM05D003905 ORTHO05D011420 1.7e-09 69.3 584 24.3
FvH4_5g32010 Fragaria vesca HOM05D003905 ORTHO05D011420 2.3e-09 68.9 584 24.3
RcHm_v2.0_Chr7g0228011 Rosa chinensis HOM05D003905 ORTHO05D011420 2.3e-09 68.9 615 24.2
MBI10_g30419_MAGBIO Magnolia biondii HOM05D003905 ORTHO05D005329 1.9e-08 65.9 297 25.9
Nn7g36677 Nelumbo nucifera HOM05D003905 ORTHO05D005329 9.6e-08 63.5 100 41.0
A09p07890 Brassica napus HOM05D002487 ORTHO05D002748 1.6e-07 62.8 503 27.4
BraA09t36440Z Brassica rapa HOM05D002487 ORTHO05D002748 1.6e-07 62.8 503 27.4
FAN04G1043 Fragaria x ananassa HOM05D003905 ORTHO05D011420 2.8e-07 62.0 588 23.6
FAN08G2565 Fragaria x ananassa HOM05D003905 ORTHO05D011420 2.8e-07 62.0 584 24.1
Nn3g18652 Nelumbo nucifera HOM05D003905 ORTHO05D005329 4.8e-07 61.2 91 42.9
Dinv39528 Davidia involucrata HOM05D003905 ORTHO05D005329 8.1e-07 60.5 69 47.8


User provided reference genes

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