Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 0.0e+00 2542.7 1261 100.0
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 0.0e+00 2009.2 1268 78.3
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 0.0e+00 2006.5 1268 78.2
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 0.0e+00 1964.5 1270 76.2
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 0.0e+00 1957.2 1269 76.0
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 0.0e+00 1928.7 1266 74.4
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 0.0e+00 1924.8 1270 74.1
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 0.0e+00 1916.4 1277 73.7
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 0.0e+00 1915.2 1270 74.5
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 0.0e+00 1911.0 1263 75.2
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 0.0e+00 1909.0 1270 74.3
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 0.0e+00 1907.9 1270 74.1
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 0.0e+00 1906.0 1274 73.3
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 0.0e+00 1904.4 1271 74.4
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 0.0e+00 1904.0 1265 74.1
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 0.0e+00 1903.6 1273 73.6
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 0.0e+00 1902.5 1268 73.9
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 0.0e+00 1899.0 1263 74.3
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 0.0e+00 1898.6 1265 74.5
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 0.0e+00 1895.6 1266 72.9
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 0.0e+00 1893.2 1266 72.8
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 0.0e+00 1893.2 1291 73.0
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 0.0e+00 1891.7 1270 73.9
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 0.0e+00 1891.7 1270 73.6
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 0.0e+00 1891.3 1302 71.8
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 0.0e+00 1887.5 1273 73.2
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 0.0e+00 1887.1 1293 72.2
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 0.0e+00 1884.0 1271 73.0
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 0.0e+00 1884.0 1264 73.9
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 0.0e+00 1882.1 1263 72.6
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 0.0e+00 1877.4 1271 75.2
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 0.0e+00 1871.7 1261 73.4
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 0.0e+00 1870.9 1264 73.4
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 0.0e+00 1870.5 1264 73.4
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 0.0e+00 1869.4 1264 72.9
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 0.0e+00 1868.6 1264 73.3
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 0.0e+00 1867.8 1264 73.3
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 0.0e+00 1866.7 1266 72.2
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 0.0e+00 1865.9 1264 73.3
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 0.0e+00 1860.1 1264 73.3
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 0.0e+00 1857.8 1274 71.6
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 0.0e+00 1857.4 1269 72.9
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 0.0e+00 1857.4 1274 71.6
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 0.0e+00 1857.0 1264 72.8
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 0.0e+00 1857.0 1264 73.2
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 0.0e+00 1855.9 1269 72.5
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 0.0e+00 1853.6 1272 71.4
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 0.0e+00 1853.2 1265 73.1
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 0.0e+00 1852.8 1266 72.5
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 0.0e+00 1847.4 1266 71.2
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 0.0e+00 1845.5 1248 73.5
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 0.0e+00 1838.9 1269 72.1
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 0.0e+00 1838.5 1264 72.9
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 0.0e+00 1832.4 1267 70.5
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 0.0e+00 1830.1 1266 71.8
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 0.0e+00 1827.8 1264 71.4
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 0.0e+00 1826.2 1266 71.6
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 0.0e+00 1825.1 1251 71.0
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 0.0e+00 1820.1 1270 71.4
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 0.0e+00 1819.3 1267 71.2
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 0.0e+00 1819.3 1268 71.0
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 0.0e+00 1815.0 1267 71.2
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 0.0e+00 1815.0 1521 62.3
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 0.0e+00 1813.1 1269 70.4
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 0.0e+00 1812.7 1269 70.4
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 0.0e+00 1812.0 1331 68.1
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 0.0e+00 1811.6 1267 71.0
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 0.0e+00 1811.6 1269 70.5
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 0.0e+00 1811.6 1268 71.0
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 0.0e+00 1811.2 1269 70.5
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 0.0e+00 1808.9 1269 70.4
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 0.0e+00 1808.1 1268 70.5
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 0.0e+00 1807.7 1283 70.4
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 0.0e+00 1805.8 1252 71.8
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 0.0e+00 1803.9 1267 70.4
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 0.0e+00 1791.5 1279 70.1
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 0.0e+00 1790.0 1240 71.9
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 0.0e+00 1788.5 1268 69.9
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 0.0e+00 1787.3 1268 69.9
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 0.0e+00 1785.8 1293 69.1
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 0.0e+00 1782.3 1268 69.8
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 0.0e+00 1778.8 1268 69.6
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 0.0e+00 1777.3 1263 70.4
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 0.0e+00 1776.1 1272 69.9
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 0.0e+00 1775.4 1268 69.4
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 0.0e+00 1773.8 1328 67.8
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 0.0e+00 1767.3 1266 69.7
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 0.0e+00 1763.0 1266 70.0
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 0.0e+00 1747.6 1262 69.7
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 0.0e+00 1709.5 1167 71.8
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 0.0e+00 1702.6 1167 72.1
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 0.0e+00 1695.2 1268 66.6
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 0.0e+00 1608.6 1231 65.6
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 0.0e+00 1600.9 1264 63.9
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 0.0e+00 1585.9 1087 70.7
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 0.0e+00 1580.5 1097 71.8
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 0.0e+00 1557.3 1049 74.5
Atru.chr2.2811 Acer truncatum HOM05D004029 ORTHO05D004613 0.0e+00 1517.7 1044 72.4
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 0.0e+00 1492.2 1011 73.7
Gohir.A11G282734 Gossypium hirsutum HOM05D004029 ORTHO05D004613 0.0e+00 1484.5 1072 68.3
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 0.0e+00 1453.0 1106 68.4
AL8G29790 Arabidopsis lyrata HOM05D004029 ORTHO05D004613 0.0e+00 1436.0 1039 69.0
Gohir.D11G296200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 0.0e+00 1382.9 1026 66.7
TAR627G0860 Trochodendron aralioides HOM05D004029 ORTHO05D004613 0.0e+00 1355.9 935 73.0
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 0.0e+00 1338.9 856 75.8
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 0.0e+00 1281.9 1401 50.3
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 0.0e+00 1233.8 1267 53.9
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 0.0e+00 1182.9 1365 47.3
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 0.0e+00 1088.6 745 71.5
CDE05G1182 Ceratophyllum demersum HOM05D004029 ORTHO05D004613 0.0e+00 1078.5 868 63.8
MELO3C018224.2 Cucumis melo HOM05D004029 ORTHO05D004613 0.0e+00 1077.0 780 67.9
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 1.0e-278 964.1 1175 45.9
Cpa.g.sc80.100 Carica papaya HOM05D004029 ORTHO05D004613 1.2e-276 957.2 1012 51.7
Dinv08327 Davidia involucrata HOM05D004029 ORTHO05D004613 3.3e-269 932.6 592 79.2
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 1.2e-239 834.3 870 53.1
Gohir.1Z049674 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.3e-238 830.9 536 75.0
Psat3g119680 Pisum sativum HOM05D004029 ORTHO05D004613 6.3e-204 715.7 446 77.4
CBR_g48014 Chara braunii HOM05D004029 ORTHO05D004613 3.0e-198 696.8 1446 33.2
Dinv08328 Davidia involucrata HOM05D004029 ORTHO05D004613 5.7e-181 639.4 464 71.6
TAR627G0431 Trochodendron aralioides HOM05D004029 ORTHO05D004613 6.0e-154 549.7 306 84.6
SEGI_15865 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 1.3e-148 531.9 496 56.0
SHI21494 Sapria himalayana HOM05D004029 ORTHO05D004613 3.0e-113 414.5 316 63.6
Rhsim06G0194500 Rhododendron simsii HOM05D004029 ORTHO05D004613 3.0e-97 361.3 205 82.0
SEGI_37124 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 2.6e-93 348.2 316 59.8
HPP92_020359 Vanilla planifolia HOM05D004029 ORTHO05D004613 1.0e-89 336.3 194 79.9
Pp3c3_4080 Physcomitrium patens HOM05D004029 ORTHO05D004613 9.7e-88 329.7 372 47.3
SMO115G0239 Selaginella moellendorffii HOM05D004029 ORTHO05D004613 6.7e-81 307.0 255 58.8
Atru.chr2.2810 Acer truncatum HOM05D004029 ORTHO05D004613 2.9e-76 291.6 172 79.7
Lsat_1_v5_gn_3_80381 Lactuca sativa HOM05D004029 ORTHO05D004613 2.3e-73 282.0 264 54.9
Lsat_1_v5_gn_4_112941 Lactuca sativa HOM05D004029 ORTHO05D004613 2.3e-73 282.0 264 54.9
Lsat_1_v5_gn_7_74701 Lactuca sativa HOM05D004029 ORTHO05D004613 2.3e-73 282.0 264 54.9
Psat1g176800 Pisum sativum HOM05D004029 ORTHO05D004613 1.5e-72 279.3 235 61.3
Psat1g176880 Pisum sativum HOM05D004029 ORTHO05D004613 4.4e-72 277.7 231 62.3
Dinv08326 Davidia involucrata HOM05D004029 ORTHO05D004613 9.8e-72 276.6 159 82.4
Atru.chr2.2808 Acer truncatum HOM05D004029 ORTHO05D004613 1.8e-70 272.3 151 84.1
SEGI_39917 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 7.2e-67 260.4 263 52.1
Thhalv10015732m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 9.8e-64 250.0 181 64.6
HPP92_020356 Vanilla planifolia HOM05D004029 ORTHO05D004613 8.0e-58 230.3 456 33.6
Gohir.1Z049574 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.0e-57 229.9 162 69.8
Actinidia39414 Actinidia chinensis HOM05D004029 ORTHO05D004613 4.0e-57 228.0 155 71.6
Sed0014205 Sechium edule HOM05D004029 ORTHO05D004613 5.7e-56 224.2 197 57.9
ATR0693G140 Amborella trichopoda HOM05D004029 ORTHO05D004613 3.1e-49 201.8 132 71.2
ATR0693G350 Amborella trichopoda HOM05D004029 ORTHO05D004613 9.8e-48 196.8 147 64.6
Solyc07g063450.3 Solanum lycopersicum HOM05D000461 ORTHO05D001829 2.2e-47 195.7 219 51.6
Gohir.A11G282591 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.1e-41 175.3 137 58.4
Lsat_1_v5_gn_8_16361 Lactuca sativa HOM05D004029 ORTHO05D004613 3.1e-41 175.3 131 63.4
HPP92_027774 Vanilla planifolia HOM05D004029 ORTHO05D004613 4.9e-39 167.9 98 77.6
GSVIVG01015766001 Vitis vinifera HOM05D004029 ORTHO05D004613 8.3e-39 167.2 110 70.9
HPP92_020357 Vanilla planifolia HOM05D004029 ORTHO05D004613 4.1e-38 164.9 120 69.2
GSVIVG01016530001 Vitis vinifera HOM05D004029 ORTHO05D004613 7.1e-38 164.1 110 70.9
GSVIVG01005601001 Vitis vinifera HOM05D004029 ORTHO05D004613 3.0e-36 158.7 110 69.1
GSVIVG01006099001 Vitis vinifera HOM05D004029 ORTHO05D004613 3.0e-36 158.7 110 69.1
HPP92_027773 Vanilla planifolia HOM05D004029 ORTHO05D004613 6.6e-36 157.5 98 81.6
Dinv22372 Davidia involucrata HOM05D004029 ORTHO05D004613 1.1e-35 156.8 111 66.7
GSVIVG01030797001 Vitis vinifera HOM05D004029 ORTHO05D004613 9.5e-35 153.7 110 68.2
Psat7g242400 Pisum sativum HOM05D004029 ORTHO05D004613 3.1e-33 148.7 102 68.6
Gohir.D11G296250 Gossypium hirsutum HOM05D004029 ORTHO05D004613 2.6e-32 145.6 81 77.8
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 7.1e-30 137.5 124 57.3
Lsat_1_v5_gn_8_16381 Lactuca sativa HOM05D004029 ORTHO05D004613 1.0e-28 133.7 92 70.7
SEGI_16455 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 1.4e-25 123.2 78 69.2
Medtr4g126280 Medicago truncatula HOM05D004029 ORTHO05D004613 2.2e-23 115.9 65 76.9
CBR_g48013 Chara braunii HOM05D004029 ORTHO05D004613 7.1e-22 110.9 107 50.5
Lsat_1_v5_gn_6_53560 Lactuca sativa HOM05D004029 ORTHO05D004613 1.6e-21 109.8 105 57.1
Cfa025671 Carpinus fangiana HOM05D004029 ORTHO05D004613 1.6e-18 99.8 534 24.0
SEGI_17451 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 2.8e-18 99.0 62 74.2
Lsat_1_v5_gn_8_148540 Lactuca sativa HOM05D004029 ORTHO05D004613 5.8e-16 91.3 81 58.0
Psat0ss25761g0120 Pisum sativum HOM05D000735 ORTHO05D004613 5.8e-16 91.3 67 64.2
MD16G1231300 Malus domestica HOM05D004029 ORTHO05D004613 1.7e-15 89.7 57 70.2
HPP92_020358 Vanilla planifolia HOM05D004029 ORTHO05D004613 1.1e-14 87.0 52 71.2
Lsat_1_v5_gn_4_161921 Lactuca sativa HOM05D004029 ORTHO05D004613 7.9e-13 80.9 116 41.4
Cre01.g003500 Chlamydomonas reinhardtii HOM05D004029 ORTHO05D004613 3.7e-10 72.0 387 21.4
Pp3c3_4110 Physcomitrium patens HOM05D004029 ORTHO05D004613 3.7e-10 72.0 68 48.5
CSS0007909 Camellia sinensis var. sinensis HOM05D001136 ORTHO05D004613 1.8e-09 69.7 101 43.6
MBI16_g04070_MAGBIO Magnolia biondii HOM05D005084 ORTHO05D006254 2.6e-08 65.9 52 63.5


User provided reference genes

Program Settings