Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012823 Daucus carota HOM05D002412 ORTHO05D002516 1.2e-112 409.8 209 100.0
DCAR_019349 Daucus carota HOM05D001207 ORTHO05D009015 1.3e-16 90.9 130 50.0
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.7e-16 89.4 207 39.6
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 3.7e-16 89.4 132 47.7
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 1.1e-15 87.8 207 38.6
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 1.1e-15 87.8 214 34.1
Oeu020549.2 Olea europaea HOM05D002412 ORTHO05D002516 1.4e-15 87.4 119 49.6
Dinv44944 Davidia involucrata HOM05D002412 ORTHO05D002516 3.1e-15 86.3 202 37.1
Gohir.A05G210800 Gossypium hirsutum HOM05D002412 ORTHO05D002516 5.3e-15 85.5 207 38.6
Rhsim06G0063100 Rhododendron simsii HOM05D002412 ORTHO05D002516 5.3e-15 85.5 205 38.5
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 6.9e-15 85.1 216 37.0
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 2.0e-14 83.6 212 34.0
Peaxi162Scf00081g00269 Petunia axillaris HOM05D002412 ORTHO05D002516 2.0e-14 83.6 215 34.9
Duzib093G1945 Durio zibethinus HOM05D002412 ORTHO05D002516 3.4e-14 82.8 133 48.1
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.4e-14 82.8 210 36.2
Oeu053627.1 Olea europaea HOM05D002412 ORTHO05D002516 3.4e-14 82.8 125 47.2
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 5.8e-14 82.0 133 46.6
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 1.0e-13 81.3 202 37.6
Cc10_g05040 Coffea canephora HOM05D002412 ORTHO05D002516 1.3e-13 80.9 127 45.7
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 1.7e-13 80.5 211 33.6
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 2.2e-13 80.1 199 36.7
Nitab4.5_0003725g0030 Nicotiana tabacum HOM05D002412 ORTHO05D002516 2.2e-13 80.1 209 34.9
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 2.2e-13 80.1 217 37.3
Gohir.D02G088500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 2.9e-13 79.7 210 35.7
Nitab4.5_0000497g0080 Nicotiana tabacum HOM05D002412 ORTHO05D002516 2.9e-13 79.7 121 44.6
PGSC0003DMG400010615 Solanum tuberosum HOM05D002412 ORTHO05D002516 2.9e-13 79.7 162 38.9
DCAR_020053 Daucus carota HOM05D002412 ORTHO05D002516 5.0e-13 79.0 148 43.2
Gorai.005G099200 Gossypium raimondii HOM05D002412 ORTHO05D002516 5.0e-13 79.0 210 35.7
Actinidia10209 Actinidia chinensis HOM05D002412 ORTHO05D002516 6.5e-13 78.6 206 39.3
vmacro19537 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 1.4e-12 77.4 126 42.9
Cc00_g17020 Coffea canephora HOM05D002412 ORTHO05D002516 3.2e-12 76.3 132 43.9
Glyma.01G242100 Glycine max HOM05D002412 ORTHO05D002516 3.2e-12 76.3 199 32.7
Solyc04g077690.3 Solanum lycopersicum HOM05D002412 ORTHO05D002516 3.2e-12 76.3 213 35.7
Solyc12g088300.2 Solanum lycopersicum HOM05D002412 ORTHO05D002516 3.2e-12 76.3 206 34.0
vmacro01953 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 3.2e-12 76.3 125 44.0
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 4.2e-12 75.9 146 38.4
CSS0009619 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 4.2e-12 75.9 212 35.4
ECA246G2811 Erigeron canadensis HOM05D002412 ORTHO05D002516 4.2e-12 75.9 129 41.9
PGSC0003DMG401011556 Solanum tuberosum HOM05D002412 ORTHO05D002516 4.2e-12 75.9 204 33.3
Ciclev10002703m.g Citrus clementina HOM05D002412 ORTHO05D002516 5.5e-12 75.5 213 35.7
Haze_10271 Corylus avellana HOM05D002412 ORTHO05D002516 5.5e-12 75.5 215 32.1
PSO170G3219 Papaver somniferum HOM05D002412 ORTHO05D002516 5.5e-12 75.5 155 40.0
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 5.5e-12 75.5 214 34.6
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 7.1e-12 75.1 205 37.1
Lj1g0009349 Lotus japonicus HOM05D002412 ORTHO05D002516 9.3e-12 74.7 210 33.3
VMungo1215G2231 Vigna mungo HOM05D002412 ORTHO05D002516 9.3e-12 74.7 145 36.6
Duzib052G0953 Durio zibethinus HOM05D002412 ORTHO05D002516 1.6e-11 73.9 217 33.2
Atru.chr13.848 Acer truncatum HOM05D002412 ORTHO05D002516 2.1e-11 73.6 140 44.3
unitig_46.g17922 Utricularia gibba HOM05D001230 ORTHO05D001067 2.1e-11 73.6 120 47.5
PSO017G0848 Papaver somniferum HOM05D002412 ORTHO05D002516 2.7e-11 73.2 143 41.3
DCAR_009875 Daucus carota HOM05D002412 ORTHO05D002516 3.5e-11 72.8 200 36.0
MD15G1067500 Malus domestica HOM05D002412 ORTHO05D002516 4.6e-11 72.4 209 36.8
Sopen12g030300 Solanum pennellii HOM05D002412 ORTHO05D002516 6.1e-11 72.0 124 41.1
Oeu036975.1 Olea europaea HOM05D002412 ORTHO05D002516 7.9e-11 71.6 130 41.5
Prupe.8G147000 Prunus persica HOM05D002412 ORTHO05D002516 7.9e-11 71.6 226 33.6
Nitab4.5_0003953g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 1.0e-10 71.2 208 33.7
QL11p029982 Quercus lobata HOM05D002412 ORTHO05D002516 1.0e-10 71.2 220 32.3
CiPaw.07G173700 Carya illinoinensis HOM05D002412 ORTHO05D002516 1.3e-10 70.9 207 34.3
Sopen04g031330 Solanum pennellii HOM05D002412 ORTHO05D002516 1.3e-10 70.9 221 33.9
MELO3C016826.2 Cucumis melo HOM05D002412 ORTHO05D002516 1.8e-10 70.5 202 34.2
Psat0ss7070g0040 Pisum sativum HOM05D002412 ORTHO05D002516 1.8e-10 70.5 122 41.0
Rhsim05G0091500 Rhododendron simsii HOM05D002412 ORTHO05D002516 1.8e-10 70.5 134 40.3
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 2.3e-10 70.1 207 31.4
Actinidia04390 Actinidia chinensis HOM05D002412 ORTHO05D002516 3.0e-10 69.7 123 40.7
Dinv15818 Davidia involucrata HOM05D002412 ORTHO05D002516 3.0e-10 69.7 161 37.9
Actinidia00360 Actinidia chinensis HOM05D002412 ORTHO05D002516 3.9e-10 69.3 209 32.1
CSS0003834 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 3.9e-10 69.3 138 39.9
Nitab4.5_0007781g0010 Nicotiana tabacum HOM05D002412 ORTHO05D002516 3.9e-10 69.3 207 32.4
QL93p0154_0003 Quercus lobata HOM05D002412 ORTHO05D002516 3.9e-10 69.3 198 34.8
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 3.9e-10 69.3 196 36.7
Ca_24361_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 5.1e-10 68.9 130 39.2
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 5.1e-10 68.9 152 34.2
CiPaw.08G050800 Carya illinoinensis HOM05D002412 ORTHO05D002516 6.7e-10 68.6 133 40.6
Hma1.2p1_1059F.1_g253110 Hydrangea macrophylla HOM05D002412 ORTHO05D002516 6.7e-10 68.6 209 30.1
Sed0022600 Sechium edule HOM05D002412 ORTHO05D002516 6.7e-10 68.6 204 36.8
TPR.G8322 Trifolium pratense HOM05D002412 ORTHO05D002516 6.7e-10 68.6 199 31.7
QL12p038263 Quercus lobata HOM05D002412 ORTHO05D002516 8.7e-10 68.2 198 34.8
Sopen01g049190 Solanum pennellii HOM05D002412 ORTHO05D002516 8.7e-10 68.2 197 33.0
MSTRG.1024 Avicennia marina HOM05D002412 ORTHO05D002516 1.1e-09 67.8 133 41.4
Haze_22419 Corylus avellana HOM05D002412 ORTHO05D002516 1.1e-09 67.8 120 42.5
Oeu037507.3 Olea europaea HOM05D006761 ORTHO05D002516 1.1e-09 67.8 136 41.9
Psat4g227320 Pisum sativum HOM05D002412 ORTHO05D002516 1.1e-09 67.8 194 32.0
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 1.5e-09 67.4 146 37.0
THA.LOC104807210 Tarenaya hassleriana HOM05D002412 ORTHO05D002516 1.5e-09 67.4 218 32.6
MSTRG.22217 Avicennia marina HOM05D002412 ORTHO05D002516 1.9e-09 67.0 201 32.3
Gohir.D12G019500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.9e-09 67.0 208 32.7
Gorai.008G019800 Gossypium raimondii HOM05D002412 ORTHO05D002516 1.9e-09 67.0 208 32.7
COL.COLO4_28483 Corchorus olitorius HOM05D002412 ORTHO05D002516 2.5e-09 66.6 137 40.1
Glyma.10G256100 Glycine max HOM05D002412 ORTHO05D002516 2.5e-09 66.6 209 32.5
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 2.5e-09 66.6 117 41.0
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 2.5e-09 66.6 197 35.5
RhsimUnG0041400 Rhododendron simsii HOM05D002412 ORTHO05D002516 2.5e-09 66.6 143 37.1
RhsimUnG0123400 Rhododendron simsii HOM05D002412 ORTHO05D002516 2.5e-09 66.6 143 37.1
TPR.G21149 Trifolium pratense HOM05D002412 ORTHO05D002516 2.5e-09 66.6 205 33.2
MSTRG.24380 Avicennia marina HOM05D002412 ORTHO05D002516 3.3e-09 66.2 130 36.9
FAN20G2155 Fragaria x ananassa HOM05D002412 ORTHO05D002516 3.3e-09 66.2 198 32.8
Gohir.A12G019300 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.3e-09 66.2 216 32.4
HanXRQChr03g0065031 Helianthus annuus HOM05D002412 ORTHO05D002516 3.3e-09 66.2 191 32.5
SalBow6G4199 Salvia bowleyana HOM05D002412 ORTHO05D002516 3.3e-09 66.2 158 36.7
TWI12G0333 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 3.3e-09 66.2 146 39.7
Oeu048571.1 Olea europaea HOM05D002412 ORTHO05D002516 4.3e-09 65.9 130 40.0
Phvul.002G051300 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 4.3e-09 65.9 211 29.9
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 5.7e-09 65.5 196 35.2
VMungo0647G1017 Vigna mungo HOM05D002412 ORTHO05D002516 5.7e-09 65.5 125 45.6
Ciclev10029343m.g Citrus clementina HOM05D002412 ORTHO05D002516 7.4e-09 65.1 211 30.8
CsaV3_4G000130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 7.4e-09 65.1 131 40.5
Glyma.14G089039 Glycine max HOM05D002412 ORTHO05D002516 7.4e-09 65.1 154 40.9
Solyc01g106910.4 Solanum lycopersicum HOM05D002412 ORTHO05D002516 7.4e-09 65.1 199 30.2
Thecc.02G118800 Theobroma cacao HOM05D002412 ORTHO05D002516 7.4e-09 65.1 131 39.7
CsaV3_4G035130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 9.7e-09 64.7 206 34.0
Dinv39215 Davidia involucrata HOM05D002412 ORTHO05D002516 9.7e-09 64.7 202 29.2
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 9.7e-09 64.7 201 31.3
Rhsim05G0092300 Rhododendron simsii HOM05D002412 ORTHO05D002516 9.7e-09 64.7 135 39.3
unitig_0.g1046 Utricularia gibba HOM05D002412 ORTHO05D002516 9.7e-09 64.7 124 43.5
CAN.G975.16 Capsicum annuum HOM05D002412 ORTHO05D002516 1.3e-08 64.3 78 48.7
Lj4C72T9 Lonicera japonica HOM05D002412 ORTHO05D002516 1.3e-08 64.3 204 34.3
Lalb_Chr06g0165021 Lupinus albus HOM05D002412 ORTHO05D002516 1.3e-08 64.3 130 40.0
Medtr1g106080 Medicago truncatula HOM05D002412 ORTHO05D002516 1.3e-08 64.3 129 38.8
Nn5g30629 Nelumbo nucifera HOM05D002412 ORTHO05D002516 1.3e-08 64.3 162 33.3
Nitab4.5_0002040g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 1.3e-08 64.3 204 30.9
ATR0739G138 Amborella trichopoda HOM05D002412 ORTHO05D002516 1.6e-08 63.9 126 42.1
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 2.2e-08 63.5 202 30.2
HPP92_020402 Vanilla planifolia HOM05D002412 ORTHO05D002516 2.2e-08 63.5 114 41.2
Actinidia34355 Actinidia chinensis HOM05D002412 ORTHO05D002516 2.8e-08 63.2 211 29.9
DCAR_001741 Daucus carota HOM05D002412 ORTHO05D002516 2.8e-08 63.2 207 30.4
FAN15G1065 Fragaria x ananassa HOM05D002412 ORTHO05D002516 2.8e-08 63.2 206 33.5
Phvul.001G028800 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 2.8e-08 63.2 189 36.5
Psat6g214680 Pisum sativum HOM05D002412 ORTHO05D002516 2.8e-08 63.2 159 34.0
TWI12G0423 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 2.8e-08 63.2 192 31.2
EL10Ac1g02365 Beta vulgaris HOM05D002412 ORTHO05D002516 4.8e-08 62.4 142 36.6
Lj5g0023078 Lotus japonicus HOM05D002412 ORTHO05D002516 4.8e-08 62.4 128 42.2
TAR628G0919 Trochodendron aralioides HOM05D002412 ORTHO05D002516 6.3e-08 62.0 205 32.2
MELO3C018019.2 Cucumis melo HOM05D002412 ORTHO05D002516 8.2e-08 61.6 131 40.5
Glyma.20G135500 Glycine max HOM05D002412 ORTHO05D002516 8.2e-08 61.6 216 29.6
Nitab4.5_0001458g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 8.2e-08 61.6 213 33.3
Peaxi162Scf00003g00288 Petunia axillaris HOM05D002412 ORTHO05D002516 8.2e-08 61.6 127 41.7
Sc15g0005620 Simmondsia chinensis HOM05D002412 ORTHO05D002516 1.1e-07 61.2 126 39.7
CANSAT25G2021 Cannabis sativa HOM05D002412 ORTHO05D002516 1.8e-07 60.5 164 36.6
ECA236G2487 Erigeron canadensis HOM05D002412 ORTHO05D002516 2.4e-07 60.1 207 29.5
Phvul.007G046700 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 2.4e-07 60.1 199 33.2
TWI59G0380 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 2.4e-07 60.1 214 30.4
Ca_13210_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 3.1e-07 59.7 126 42.9
Gohir.A06G024600 Gossypium hirsutum HOM05D002412 ORTHO05D002516 3.1e-07 59.7 120 40.0
Gorai.010G026300 Gossypium raimondii HOM05D002412 ORTHO05D002516 3.1e-07 59.7 122 41.0
Glyma.04G046600 Glycine max HOM05D002412 ORTHO05D002516 4.1e-07 59.3 123 40.7
Lalb_Chr02g0144931 Lupinus albus HOM05D002412 ORTHO05D002516 4.1e-07 59.3 211 33.2
Medtr5g005230 Medicago truncatula HOM05D002412 ORTHO05D002516 4.1e-07 59.3 75 46.7
Sed0020406 Sechium edule HOM05D002412 ORTHO05D002516 4.1e-07 59.3 115 41.7
TWI56G0446 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 5.3e-07 58.9 189 30.7
Glyma.17G234000 Glycine max HOM05D002412 ORTHO05D002516 9.0e-07 58.2 152 37.5
Migut.C00481 Erythranthe guttata HOM05D062627 ORTHO05D002516 1.5e-06 57.4 131 39.7
SGA_v2.0_scaffold225G43055 Striga asiatica HOM05D002412 ORTHO05D002516 1.5e-06 57.4 60 55.0
Ca_11030_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 2.0e-06 57.0 210 33.3
ClCG05G020680 Citrullus lanatus HOM05D002412 ORTHO05D002516 2.0e-06 57.0 137 40.1
DCAR_029176 Daucus carota HOM05D002412 ORTHO05D002516 2.0e-06 57.0 135 35.6
Lj5g0012685 Lotus japonicus HOM05D002412 ORTHO05D002516 2.0e-06 57.0 152 33.6
Sabra09G0066300 Salix brachista HOM05D002412 ORTHO05D002516 2.0e-06 57.0 221 29.4
MSTRG.20224 Avicennia marina HOM05D002412 ORTHO05D002516 2.6e-06 56.6 203 29.6
AUR62041661 Chenopodium quinoa HOM05D002412 ORTHO05D002516 2.6e-06 56.6 139 37.4
Potri.001G292100 Populus trichocarpa HOM05D002412 ORTHO05D002516 2.6e-06 56.6 229 29.3
BraA01t00437Z Brassica rapa HOM05D002412 ORTHO05D002516 3.4e-06 56.2 177 35.6
CiPaw.06G164900 Carya illinoinensis HOM05D002412 ORTHO05D002516 3.4e-06 56.2 219 28.8
MELO3C010796.2 Cucumis melo HOM05D002412 ORTHO05D002516 3.4e-06 56.2 114 38.6
CsaV3_2G026020 Cucumis sativus L. HOM05D002412 ORTHO05D002516 3.4e-06 56.2 115 37.4
VMungo0720G0862 Vigna mungo HOM05D002412 ORTHO05D002516 3.4e-06 56.2 204 30.4
AL7G17660 Arabidopsis lyrata HOM05D002412 ORTHO05D002516 4.5e-06 55.8 124 41.9
Gohir.D06G021700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.5e-06 55.8 122 39.3
Lalb_Chr21g0308011 Lupinus albus HOM05D002412 ORTHO05D002516 4.5e-06 55.8 201 28.9
PGSC0003DMG400025836 Solanum tuberosum HOM05D002412 ORTHO05D002516 4.5e-06 55.8 204 29.4
Sed0010289 Sechium edule HOM05D002412 ORTHO05D002516 7.7e-06 55.1 125 38.4
AT4G33800 Arabidopsis thaliana HOM05D002412 ORTHO05D002516 1.0e-05 54.7 122 40.2
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 1.0e-05 54.7 133 38.3
A03p62330 Brassica napus HOM05D002412 ORTHO05D002516 1.0e-05 54.7 129 40.3
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 1.0e-05 54.7 129 40.3
AUR62022466 Chenopodium quinoa HOM05D002412 ORTHO05D002516 1.0e-05 54.7 121 40.5
Lalb_Chr11g0062941 Lupinus albus HOM05D002412 ORTHO05D002516 1.0e-05 54.7 118 40.7
unitig_578.g16152 Utricularia gibba HOM05D002412 ORTHO05D002516 1.0e-05 54.7 124 40.3
unitig_8.g4872 Utricularia gibba HOM05D002412 ORTHO05D002516 1.0e-05 54.7 119 35.3


User provided reference genes

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