Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 5.0e-114 414.5 209 100.0
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 4.7e-48 195.3 183 58.5
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.1e-47 194.1 184 57.1
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 6.8e-47 191.4 181 58.6
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.5e-46 190.3 178 58.4
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 3.8e-45 185.7 173 54.3
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.4e-44 183.7 161 59.6
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.4e-44 183.7 173 56.1
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 5.4e-44 181.8 169 55.6
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 9.2e-44 181.0 202 53.5
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 9.2e-44 181.0 155 61.3
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 1.2e-43 180.6 175 57.1
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.6e-43 180.3 185 55.7
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.6e-43 180.3 203 50.7
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.6e-43 180.3 161 57.1
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 2.7e-43 179.5 179 55.3
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 2.7e-43 179.5 192 52.6
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 1.0e-42 177.6 172 54.7
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 3.0e-42 176.0 179 53.1
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 3.0e-42 176.0 164 56.7
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 5.1e-42 175.3 181 55.2
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 6.6e-42 174.9 156 59.6
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 6.6e-42 174.9 185 53.5
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 8.7e-42 174.5 171 53.8
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 8.7e-42 174.5 163 57.1
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.1e-41 174.1 182 52.2
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.1e-41 174.1 185 54.1
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.5e-41 173.7 183 53.6
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 3.3e-41 172.6 165 57.0
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 3.3e-41 172.6 171 53.8
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 3.3e-41 172.6 153 60.1
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 3.3e-41 172.6 170 54.1
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 9.6e-41 171.0 179 52.5
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 1.3e-40 170.6 179 53.6
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 1.6e-40 170.2 181 51.4
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 2.1e-40 169.9 160 55.0
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 2.8e-40 169.5 182 54.4
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 2.8e-40 169.5 181 54.1
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 3.6e-40 169.1 188 52.7
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 3.6e-40 169.1 185 50.3
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 3.6e-40 169.1 179 52.5
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 1.1e-39 167.5 169 53.3
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.4e-39 167.2 183 52.5
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 2.4e-39 166.4 177 52.0
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 2.4e-39 166.4 177 53.7
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.1e-39 166.0 180 51.1
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 3.1e-39 166.0 180 51.1
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 5.3e-39 165.2 186 51.6
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 1.2e-38 164.1 183 50.8
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 2.0e-38 163.3 186 51.6
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 2.0e-38 163.3 166 55.4
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.6e-38 162.9 180 50.0
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 2.6e-38 162.9 177 52.5
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.7e-37 160.2 169 56.2
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.2e-37 159.8 156 49.4
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.2e-37 159.8 182 50.0
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 6.4e-37 158.3 156 52.6
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.1e-36 157.5 185 48.6
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 1.1e-36 157.5 179 51.4
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.4e-36 157.1 156 55.8
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.9e-36 156.8 175 49.7
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 3.2e-36 156.0 187 46.5
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 4.2e-36 155.6 161 51.6
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 5.4e-36 155.2 174 46.6
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 5.4e-36 155.2 168 54.2
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 7.1e-36 154.8 174 45.4
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 1.2e-35 154.1 178 54.5
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 1.6e-35 153.7 117 63.2
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 1.6e-35 153.7 181 50.8
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 2.1e-35 153.3 171 52.6
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 2.7e-35 152.9 152 56.6
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.7e-35 152.9 185 49.2
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 6.0e-35 151.8 147 49.7
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 1.0e-34 151.0 127 61.4
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.0e-34 151.0 185 47.0
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 1.7e-34 150.2 173 50.9
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 3.0e-34 149.4 169 48.5
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 3.0e-34 149.4 125 59.2
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 3.9e-34 149.1 179 46.4
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 5.1e-34 148.7 136 57.4
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 6.6e-34 148.3 154 53.2
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 8.7e-34 147.9 149 52.3
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.5e-33 147.1 145 53.1
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 4.3e-33 145.6 152 48.0
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 9.6e-33 144.4 153 48.4
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.3e-32 144.1 168 45.2
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.1e-32 143.3 152 47.4
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.1e-32 143.3 152 47.4
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 4.8e-32 142.1 165 44.8
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.1e-31 141.0 152 46.7
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 1.1e-31 141.0 165 46.7
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.1e-31 139.4 174 45.4
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.1e-31 139.4 174 45.4
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 4.0e-31 139.0 169 45.6
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 2.0e-30 136.7 152 45.4
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 2.0e-30 136.7 152 45.4
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.0e-30 136.7 131 53.4
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 1.3e-29 134.0 149 51.7
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 1.7e-29 133.7 166 43.4
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 6.4e-29 131.7 168 48.8
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 8.4e-29 131.3 179 48.0
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 4.2e-28 129.0 187 39.0
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 9.3e-28 127.9 115 56.5
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 2.1e-27 126.7 157 45.9
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 4.6e-27 125.6 105 57.1
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.1e-23 114.4 113 50.4
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.5e-17 93.2 93 50.5
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 8.2e-16 88.2 74 55.4
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 6.9e-15 85.1 74 55.4
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 2.7e-11 73.2 60 63.3
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 5.1e-10 68.9 135 34.1
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 1.1e-09 67.8 127 33.1
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 6.9e-07 58.5 43 65.1


User provided reference genes

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