Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 1.1e-49 200.3 152 100.0
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 9.4e-30 134.0 165 70.3
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 1.2e-29 133.7 166 69.3
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 1.2e-29 133.7 160 73.1
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.6e-29 133.3 154 77.3
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 2.1e-29 132.9 165 70.3
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 2.7e-29 132.5 153 74.5
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 1.0e-28 130.6 148 74.3
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.8e-28 129.8 152 77.6
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 4.0e-28 128.6 164 70.7
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 4.0e-28 128.6 164 65.9
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 6.8e-28 127.9 163 68.1
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 8.8e-28 127.5 165 67.9
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 2.6e-27 125.9 162 74.1
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 5.7e-27 124.8 164 67.7
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 7.5e-27 124.4 151 74.2
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 7.5e-27 124.4 160 69.4
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 7.5e-27 124.4 165 69.7
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 9.8e-27 124.0 151 74.2
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 1.3e-26 123.6 163 69.3
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 1.7e-26 123.2 163 68.7
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 2.2e-26 122.9 157 69.4
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 4.8e-26 121.7 166 65.7
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 6.3e-26 121.3 163 68.7
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 8.3e-26 120.9 166 68.7
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 8.3e-26 120.9 155 71.6
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 1.1e-25 120.6 168 68.5
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 1.8e-25 119.8 168 68.5
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.8e-25 119.8 167 68.3
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 3.1e-25 119.0 164 67.1
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 4.1e-25 118.6 156 73.7
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 7.0e-25 117.9 149 72.5
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 7.0e-25 117.9 145 73.1
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 9.1e-25 117.5 149 73.8
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 9.1e-25 117.5 163 68.7
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 9.1e-25 117.5 148 70.9
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.6e-24 116.7 167 67.1
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.6e-24 116.7 167 67.1
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 2.0e-24 116.3 150 70.7
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 2.0e-24 116.3 150 70.0
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 2.0e-24 116.3 150 70.7
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 2.7e-24 115.9 165 66.7
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 2.7e-24 115.9 160 66.2
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 3.5e-24 115.5 150 70.7
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 3.5e-24 115.5 148 70.9
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 5.9e-24 114.8 165 66.7
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 5.9e-24 114.8 150 70.7
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 5.9e-24 114.8 147 71.4
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 7.7e-24 114.4 158 66.5
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.0e-23 114.0 165 64.8
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 1.0e-23 114.0 167 66.5
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 1.0e-23 114.0 167 66.5
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 1.7e-23 113.2 181 60.2
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 2.2e-23 112.8 165 63.6
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 3.8e-23 112.1 161 66.5
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 6.5e-23 111.3 165 64.2
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 6.5e-23 111.3 167 66.5
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 8.5e-23 110.9 162 69.8
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 1.1e-22 110.5 165 63.6
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 1.5e-22 110.2 151 70.2
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 1.5e-22 110.2 153 71.2
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 1.5e-22 110.2 166 65.7
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 3.2e-22 109.0 167 64.1
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 3.2e-22 109.0 151 70.2
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 4.2e-22 108.6 150 68.0
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 4.2e-22 108.6 165 63.0
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 7.2e-22 107.8 125 76.0
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 1.2e-21 107.1 160 68.8
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 1.2e-21 107.1 162 64.8
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.6e-21 106.7 124 75.0
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.6e-21 106.7 124 75.0
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 1.6e-21 106.7 162 64.2
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 2.1e-21 106.3 150 67.3
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 2.8e-21 105.9 161 65.8
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 2.8e-21 105.9 151 68.2
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 2.8e-21 105.9 67 77.6
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 2.8e-21 105.9 162 66.0
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.6e-21 105.5 154 68.2
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 4.7e-21 105.1 127 73.2
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 1.0e-20 104.0 154 66.9
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 1.4e-20 103.6 150 67.3
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 1.8e-20 103.2 127 74.8
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 2.3e-20 102.8 150 66.0
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 4.0e-20 102.1 153 69.9
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 8.8e-20 100.9 162 62.3
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 8.8e-20 100.9 156 66.0
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 1.2e-19 100.5 150 66.7
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.2e-19 100.5 152 67.1
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 1.2e-19 100.5 161 65.8
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.5e-19 100.1 152 66.4
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 2.6e-19 99.4 149 69.1
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 3.4e-19 99.0 150 65.3
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 3.7e-18 95.5 142 66.2
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 4.9e-18 95.1 161 63.4
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 2.4e-17 92.8 68 70.6
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 4.1e-17 92.0 143 67.8
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.2e-16 90.5 122 74.6
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 3.5e-16 89.0 163 61.3
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 7.8e-16 87.8 157 59.2
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 2.3e-15 86.3 116 72.4
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 7.3e-14 81.3 134 67.2
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 8.0e-13 77.8 167 56.3
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 1.4e-12 77.0 56 64.3
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 5.2e-12 75.1 128 63.3
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.5e-11 73.6 128 66.4
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 9.8e-11 70.9 131 35.9
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 2.2e-10 69.7 69 55.1
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 3.5e-08 62.4 122 63.9


User provided reference genes

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