Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008687 Daucus carota HOM05D000013 ORTHO05D178227 3.4e-22 107.5 54 100.0
DCAR_004688 Daucus carota HOM05D000013 ORTHO05D177628 3.2e-12 74.3 54 72.2
DCAR_004687 Daucus carota HOM05D000013 ORTHO05D000011 3.9e-10 67.4 54 63.0
Thecc.07G065300 Theobroma cacao HOM05D000013 ORTHO05D000011 1.6e-08 62.0 55 58.2
DCAR_022494 Daucus carota HOM05D000013 ORTHO05D177771 6.1e-08 60.1 55 56.4
Thecc.07G064100 Theobroma cacao HOM05D000013 ORTHO05D000011 6.1e-08 60.1 55 56.4
Thecc.07G064900 Theobroma cacao HOM05D000013 ORTHO05D000011 1.4e-07 58.9 55 56.4
Ciclev10007645m.g Citrus clementina HOM05D000013 ORTHO05D000011 1.8e-07 58.5 49 61.2
DCAR_008688 Daucus carota HOM05D000013 ORTHO05D000011 3.1e-07 57.8 36 80.6
Dinv22344 Davidia involucrata HOM05D000013 ORTHO05D000011 3.1e-07 57.8 55 56.4
Cpa.g.sc12.8 Carica papaya HOM05D000013 ORTHO05D000011 4.0e-07 57.4 49 57.1
Sabra16G0279000 Salix brachista HOM05D000013 ORTHO05D000011 5.2e-07 57.0 55 47.3
Thecc.07G064600 Theobroma cacao HOM05D000013 ORTHO05D000011 6.8e-07 56.6 55 54.5
Thecc.07G064800 Theobroma cacao HOM05D000013 ORTHO05D000011 6.8e-07 56.6 55 54.5
CSS0006252 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 8.9e-07 56.2 55 56.4
CSS0050196 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 8.9e-07 56.2 55 58.2
DCAR_019121 Daucus carota HOM05D000013 ORTHO05D000011 8.9e-07 56.2 54 55.6
Manes.03G118001 Manihot esculenta HOM05D000013 ORTHO05D000011 8.9e-07 56.2 55 54.5
Potri.001G409300 Populus trichocarpa HOM05D000013 ORTHO05D000011 8.9e-07 56.2 55 54.5
Sabra16G0278300 Salix brachista HOM05D000013 ORTHO05D000011 8.9e-07 56.2 55 50.9
Ciclev10007451m.g Citrus clementina HOM05D000013 ORTHO05D000011 1.2e-06 55.8 55 49.1
Rhsim06G0191400 Rhododendron simsii HOM05D000013 ORTHO05D000011 1.2e-06 55.8 57 56.1
Lj8C162T19 Lonicera japonica HOM05D000013 ORTHO05D000011 1.5e-06 55.5 56 53.6
Potri.001G412000 Populus trichocarpa HOM05D000013 ORTHO05D000011 1.5e-06 55.5 55 49.1
Potri.001G413400 Populus trichocarpa HOM05D000013 ORTHO05D000011 1.5e-06 55.5 55 52.7
Potri.001G414200 Populus trichocarpa HOM05D000013 ORTHO05D000011 1.5e-06 55.5 55 52.7
Potri.011G125000 Populus trichocarpa HOM05D000013 ORTHO05D000011 1.5e-06 55.5 55 52.7
vmacro11795 Vaccinium macrocarpon HOM05D000013 ORTHO05D000011 1.5e-06 55.5 57 56.1
Manes.03G118100 Manihot esculenta HOM05D000013 ORTHO05D000011 2.0e-06 55.1 45 60.0
PGR083G2237 Punica granatum HOM05D000013 ORTHO05D000011 2.0e-06 55.1 55 52.7
CSS0026717 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 2.6e-06 54.7 55 56.4
DCAR_015305 Daucus carota HOM05D000013 ORTHO05D000011 2.6e-06 54.7 53 52.8
Gohir.D01G057800 Gossypium hirsutum HOM05D000013 ORTHO05D000011 2.6e-06 54.7 49 53.1
Gorai.002G078200 Gossypium raimondii HOM05D000013 ORTHO05D000011 2.6e-06 54.7 49 53.1
Manes.03G118051 Manihot esculenta HOM05D000013 ORTHO05D000011 2.6e-06 54.7 49 57.1
Manes.13G074100 Manihot esculenta HOM05D000013 ORTHO05D000011 2.6e-06 54.7 55 49.1
Potri.011G125050 Populus trichocarpa HOM05D000013 ORTHO05D000011 2.6e-06 54.7 55 52.7
vmacro11796 Vaccinium macrocarpon HOM05D000013 ORTHO05D000011 2.6e-06 54.7 57 54.4
Atru.chr2.3087 Acer truncatum HOM05D000013 ORTHO05D000011 3.4e-06 54.3 49 55.1
CSS0014149 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 3.4e-06 54.3 55 52.7
Potri.001G413700 Populus trichocarpa HOM05D000013 ORTHO05D000011 3.4e-06 54.3 55 50.9
Sabra11G0114000 Salix brachista HOM05D000013 ORTHO05D000011 3.4e-06 54.3 54 51.9
Thecc.07G064400 Theobroma cacao HOM05D000013 ORTHO05D000011 3.4e-06 54.3 55 52.7
Ciclev10010587m.g Citrus clementina HOM05D000013 ORTHO05D000011 4.4e-06 53.9 55 49.1
DCAR_021645 Daucus carota HOM05D000013 ORTHO05D011555 4.4e-06 53.9 55 50.9
DCAR_023330 Daucus carota HOM05D000013 ORTHO05D011555 4.4e-06 53.9 54 51.9
Nitab4.5_0009431g0010 Nicotiana tabacum HOM05D000013 ORTHO05D000011 4.4e-06 53.9 55 49.1
vmacro11793 Vaccinium macrocarpon HOM05D000013 ORTHO05D000011 5.8e-06 53.5 54 53.7
Potri.010G015400 Populus trichocarpa HOM05D000013 ORTHO05D000011 7.5e-06 53.1 55 50.9
SalBow8G0717 Salvia bowleyana HOM05D000013 ORTHO05D000011 7.5e-06 53.1 56 51.8
TWI39G0920 Tripterygium wilfordii HOM05D000013 ORTHO05D000011 7.5e-06 53.1 54 53.7
DCAR_003941 Daucus carota HOM05D000013 ORTHO05D000011 9.8e-06 52.8 54 53.7
Potri.011G125851 Populus trichocarpa HOM05D000013 ORTHO05D000011 9.8e-06 52.8 55 50.9
QL02p099119 Quercus lobata HOM05D000013 ORTHO05D000011 9.8e-06 52.8 56 53.6
Sabra16G0273200 Salix brachista HOM05D000013 ORTHO05D000011 9.8e-06 52.8 44 59.1


User provided reference genes

Program Settings