Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 1.6e-108 396.7 316 100.0
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 7.2e-40 168.7 174 58.0
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 5.0e-17 92.8 297 32.0
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 2.5e-16 90.5 169 43.2
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.6e-15 87.8 265 49.4
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 4.7e-15 86.3 262 37.4
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 8.0e-15 85.5 136 43.4
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.8e-14 84.3 158 41.8
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.2e-13 81.6 303 30.7
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 7.5e-13 79.0 319 30.4
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 9.8e-13 78.6 272 36.0
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 2.2e-12 77.4 147 38.1
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 2.8e-12 77.0 154 34.4
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 4.9e-12 76.3 286 42.0
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 4.9e-12 76.3 288 45.5
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.4e-11 74.7 278 43.2
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.4e-11 74.7 269 29.4
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 3.1e-11 73.6 161 41.6
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 4.1e-11 73.2 305 42.0
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 5.4e-11 72.8 260 35.0
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 9.1e-11 72.0 265 28.3
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 9.1e-11 72.0 93 47.3
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 9.1e-11 72.0 282 35.5
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.0e-10 70.9 168 38.1
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 2.0e-10 70.9 286 30.1
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.0e-10 70.9 117 41.0
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 3.5e-10 70.1 126 42.9
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.5e-10 70.1 134 41.8
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 4.5e-10 69.7 161 37.3
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 5.9e-10 69.3 307 34.9
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 5.9e-10 69.3 163 39.3
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 5.9e-10 69.3 309 43.0
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.9e-10 69.3 80 53.8
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 7.7e-10 68.9 286 29.0
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 7.7e-10 68.9 191 33.5
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 7.7e-10 68.9 191 33.5
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.7e-09 67.8 135 42.2
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 2.3e-09 67.4 109 45.9
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.3e-09 67.4 134 40.3
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 2.9e-09 67.0 304 46.7
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.9e-09 67.0 121 41.3
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 3.8e-09 66.6 171 38.0
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 3.8e-09 66.6 274 31.8
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 3.8e-09 66.6 294 34.0
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.0e-09 66.2 148 39.2
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 5.0e-09 66.2 108 45.4
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 6.6e-09 65.9 161 38.5
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 8.6e-09 65.5 282 34.0
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 8.6e-09 65.5 274 35.0
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 8.6e-09 65.5 168 34.5
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 1.5e-08 64.7 287 31.7
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 1.5e-08 64.7 110 45.5
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 1.5e-08 64.7 177 35.0
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 1.5e-08 64.7 162 34.0
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 1.9e-08 64.3 85 49.4
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 1.9e-08 64.3 79 54.4
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 2.5e-08 63.9 154 35.1
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 3.3e-08 63.5 155 39.4
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 3.3e-08 63.5 90 46.7
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.6e-08 62.8 283 36.4
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.6e-08 62.8 283 36.4
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 5.6e-08 62.8 286 31.5
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 5.6e-08 62.8 288 34.0
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 9.5e-08 62.0 280 37.9
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 1.2e-07 61.6 292 35.3
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 1.2e-07 61.6 290 33.8
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.2e-07 61.6 165 35.2
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 1.2e-07 61.6 269 28.3
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 2.1e-07 60.8 264 29.2
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 2.8e-07 60.5 204 35.8
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.8e-07 60.5 269 27.9
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 3.6e-07 60.1 165 35.8
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.7e-07 59.7 80 47.5
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 4.7e-07 59.7 86 46.5
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 6.1e-07 59.3 139 38.1
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 8.0e-07 58.9 317 25.9
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 8.0e-07 58.9 269 28.3
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 1.0e-06 58.5 98 45.9
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 1.0e-06 58.5 300 30.3
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 1.0e-06 58.5 155 36.1
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.4e-06 58.2 273 33.0
Thhalv10017182m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 1.8e-06 57.8 171 34.5
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 1.8e-06 57.8 161 34.8
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.8e-06 57.8 273 33.0
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.3e-06 57.4 118 40.7
Sc23g0001700 Simmondsia chinensis HOM05D028926 ORTHO05D005331 2.3e-06 57.4 182 34.6
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 2.3e-06 57.4 171 31.6
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 3.0e-06 57.0 267 41.2
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 3.0e-06 57.0 143 34.3
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 4.0e-06 56.6 171 35.1
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 4.0e-06 56.6 171 35.1
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 5.2e-06 56.2 180 32.8


User provided reference genes

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