Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007483 Daucus carota HOM05D006374 ORTHO05D006349 7.5e-172 607.1 302 100.0
CSS0045232 Camellia sinensis var. sinensis HOM05D006374 ORTHO05D006349 3.5e-36 156.4 302 34.1
Dinv11161 Davidia involucrata HOM05D006374 ORTHO05D006349 1.1e-34 151.4 201 42.3
Duzib205G1366 Durio zibethinus HOM05D006374 ORTHO05D006349 4.3e-34 149.4 199 41.2
Cc01_g06860 Coffea canephora HOM05D006374 ORTHO05D006349 1.3e-33 147.9 210 41.0
Gorai.001G059300 Gossypium raimondii HOM05D006374 ORTHO05D006349 1.6e-33 147.5 215 38.6
TAR374G0798 Trochodendron aralioides HOM05D006374 ORTHO05D006349 6.2e-33 145.6 232 36.6
CAN.G328.5 Capsicum annuum HOM05D006374 ORTHO05D006349 1.1e-32 144.8 301 33.9
MSTRG.20819 Avicennia marina HOM05D006374 ORTHO05D006349 2.4e-32 143.7 303 33.7
Oeu025935.3 Olea europaea HOM05D001292 ORTHO05D006349 4.0e-32 142.9 242 35.1
Sopen02g012480 Solanum pennellii HOM05D006374 ORTHO05D006349 1.5e-31 141.0 196 39.3
Lsat_1_v5_gn_4_76860 Lactuca sativa HOM05D006374 ORTHO05D006349 2.0e-31 140.6 215 41.4
PGSC0003DMG401023161 Solanum tuberosum HOM05D006374 ORTHO05D006349 2.0e-31 140.6 196 39.3
GSVIVG01007539001 Vitis vinifera HOM05D006374 ORTHO05D006349 2.0e-31 140.6 213 39.0
Nitab4.5_0000205g0050 Nicotiana tabacum HOM05D006374 ORTHO05D006349 2.6e-31 140.2 245 36.3
Migut.D00695 Erythranthe guttata HOM05D006374 ORTHO05D006349 4.5e-31 139.4 230 37.4
Oeu032041.1 Olea europaea HOM05D001292 ORTHO05D006349 5.8e-31 139.0 222 35.6
Ciclev10021330m.g Citrus clementina HOM05D006374 ORTHO05D006349 7.6e-31 138.7 227 37.0
COL.COLO4_28091 Corchorus olitorius HOM05D001045 ORTHO05D001542 7.6e-31 138.7 187 39.0
Psat5g141920 Pisum sativum HOM05D006374 ORTHO05D006349 2.2e-30 137.1 201 39.3
Medtr3g075090 Medicago truncatula HOM05D006374 ORTHO05D006349 3.8e-30 136.3 199 38.7
Ca_16088_v3 Cicer arietinum L. HOM05D006374 ORTHO05D006349 4.9e-30 136.0 202 39.6
arahy.Tifrunner.gnm1.ann1.6C93RA Arachis hypogaea HOM05D006374 ORTHO05D006349 6.4e-30 135.6 212 37.7
Sabra10G0138300 Salix brachista HOM05D006374 ORTHO05D006349 6.4e-30 135.6 228 36.4
Peaxi162Scf00234g00413 Petunia axillaris HOM05D006374 ORTHO05D006349 1.1e-29 134.8 274 33.9
Nitab4.5_0004577g0040 Nicotiana tabacum HOM05D006374 ORTHO05D006349 1.4e-29 134.4 293 33.8
Phvul.009G168700 Phaseolus vulgaris HOM05D006374 ORTHO05D006349 1.4e-29 134.4 181 38.7
Hund05647 Selenicereus undatus HOM05D006374 ORTHO05D006349 1.9e-29 134.0 212 35.4
TWI39G0161 Tripterygium wilfordii HOM05D006374 ORTHO05D006349 2.4e-29 133.7 230 35.7
HanXRQChr16g0497711 Helianthus annuus HOM05D006374 ORTHO05D006349 4.2e-29 132.9 200 38.5
Prupe.5G156800 Prunus persica HOM05D006374 ORTHO05D006349 4.2e-29 132.9 180 38.9
PGSC0003DMG400027413 Solanum tuberosum HOM05D006374 ORTHO05D006349 4.2e-29 132.9 186 38.7
CANSAT80G0307 Cannabis sativa HOM05D006374 ORTHO05D006349 5.5e-29 132.5 204 36.8
Nitab4.5_0003471g0010 Nicotiana tabacum HOM05D006374 ORTHO05D006349 5.5e-29 132.5 283 32.5
Solyc11g072220.2 Solanum lycopersicum HOM05D006374 ORTHO05D006349 5.5e-29 132.5 186 39.2
SGA_v2.0_scaffold277G46663 Striga asiatica HOM05D006374 ORTHO05D006349 7.1e-29 132.1 189 38.6
Potri.010G180300 Populus trichocarpa HOM05D006374 ORTHO05D006349 9.3e-29 131.7 223 35.9
Sopen11g029890 Solanum pennellii HOM05D006374 ORTHO05D006349 9.3e-29 131.7 186 39.2
ATR0824G075 Amborella trichopoda HOM05D001292 ORTHO05D006349 1.2e-28 131.3 257 31.1
EL10Ac3g05470 Beta vulgaris HOM05D006374 ORTHO05D006349 1.6e-28 131.0 181 38.1
Gohir.D13G208100 Gossypium hirsutum HOM05D006374 ORTHO05D006349 2.7e-28 130.2 232 33.6
Gorai.013G237200 Gossypium raimondii HOM05D006374 ORTHO05D006349 2.7e-28 130.2 232 33.6
Gohir.A13G202800 Gossypium hirsutum HOM05D006374 ORTHO05D006349 3.5e-28 129.8 255 31.0
MSTRG.18477 Avicennia marina HOM05D006374 ORTHO05D006349 4.6e-28 129.4 213 35.7
Lj1g0028093 Lotus japonicus HOM05D006374 ORTHO05D006349 4.6e-28 129.4 254 33.5
RcHm_v2.0_Chr7g0191071 Rosa chinensis HOM05D006374 ORTHO05D006349 4.6e-28 129.4 230 34.8
Potri.015G090800 Populus trichocarpa HOM05D006374 ORTHO05D006349 6.0e-28 129.0 206 36.4
Sabra15G0112900 Salix brachista HOM05D006374 ORTHO05D006349 7.9e-28 128.6 180 38.3
arahy.Tifrunner.gnm1.ann1.EEZ80W Arachis hypogaea HOM05D006374 ORTHO05D006349 1.0e-27 128.3 180 40.0
CiPaw.11G012000 Carya illinoinensis HOM05D006374 ORTHO05D006349 1.0e-27 128.3 219 34.2
COL.COLO4_29525 Corchorus olitorius HOM05D006374 ORTHO05D006349 1.0e-27 128.3 238 34.0
FAN08G0738 Fragaria x ananassa HOM05D006374 ORTHO05D006349 1.0e-27 128.3 180 37.2
VMungo1309G0655 Vigna mungo HOM05D006374 ORTHO05D006349 1.0e-27 128.3 180 37.2
FvH4_5g07530 Fragaria vesca HOM05D006374 ORTHO05D006349 1.3e-27 127.9 180 36.7
QL10p005050 Quercus lobata HOM05D006374 ORTHO05D006349 1.3e-27 127.9 209 36.8
ECA232G1265 Erigeron canadensis HOM05D006374 ORTHO05D006349 1.8e-27 127.5 199 38.2
Migut.B01731 Erythranthe guttata HOM05D006374 ORTHO05D006349 1.8e-27 127.5 229 32.8
Rhsim08G0189000 Rhododendron simsii HOM05D006374 ORTHO05D006349 1.8e-27 127.5 239 33.5
Cc03_g12860 Coffea canephora HOM05D006374 ORTHO05D006349 2.3e-27 127.1 282 31.6
SEGI_23287 Sequoiadendron giganteum HOM05D001292 ORTHO05D006349 2.3e-27 127.1 180 35.0
Thecc.03G123000 Theobroma cacao HOM05D006374 ORTHO05D006349 2.3e-27 127.1 228 36.0
FAN18G3707 Fragaria x ananassa HOM05D006374 ORTHO05D006349 5.1e-27 125.9 180 36.7
Nn4g22459 Nelumbo nucifera HOM05D006374 ORTHO05D006349 8.7e-27 125.2 212 36.3
Migut.D00697 Erythranthe guttata HOM05D006374 ORTHO05D006349 1.1e-26 124.8 265 31.3
Lsat_1_v5_gn_9_14500 Lactuca sativa HOM05D006374 ORTHO05D006349 1.1e-26 124.8 161 43.5
TWI63G0087 Tripterygium wilfordii HOM05D006374 ORTHO05D006349 1.9e-26 124.0 198 36.9
MD14G1163400 Malus domestica HOM05D006374 ORTHO05D006349 2.5e-26 123.6 188 38.3
AUR62041397 Chenopodium quinoa HOM05D006374 ORTHO05D006349 3.3e-26 123.2 211 33.2
FvH4_3g25530 Fragaria vesca HOM05D006374 ORTHO05D006349 4.3e-26 122.9 190 35.8
SEGI_20117 Sequoiadendron giganteum HOM05D001292 ORTHO05D006349 4.3e-26 122.9 175 36.0
Eucgr.B00120 Eucalyptus grandis HOM05D006374 ORTHO05D006349 7.4e-26 122.1 223 35.9
Thhalv10010584m.g Eutrema salsugineum HOM05D006374 ORTHO05D006349 7.4e-26 122.1 181 37.6
PGR083G0950 Punica granatum HOM05D006374 ORTHO05D006349 7.4e-26 122.1 181 34.8
PSO384G0777 Papaver somniferum HOM05D006374 ORTHO05D006349 2.8e-25 120.2 273 32.6
Sc16g0003540 Simmondsia chinensis HOM05D006374 ORTHO05D006349 2.8e-25 120.2 213 32.4
Atru.chr9.1014 Acer truncatum HOM05D006374 ORTHO05D006349 3.7e-25 119.8 243 32.1
Cfa018891 Carpinus fangiana HOM05D006374 ORTHO05D006349 3.7e-25 119.8 235 32.3
Manes.14G055266 Manihot esculenta HOM05D006374 ORTHO05D006349 6.2e-25 119.0 184 37.0
PSO339G4060 Papaver somniferum HOM05D006374 ORTHO05D006349 6.2e-25 119.0 160 36.9
FAN11G0071 Fragaria x ananassa HOM05D006374 ORTHO05D006349 1.1e-24 118.2 191 35.6
Glyma.04G193100 Glycine max HOM05D006374 ORTHO05D006349 2.4e-24 117.1 184 35.3
PSO384G4638 Papaver somniferum HOM05D006374 ORTHO05D006349 3.1e-24 116.7 286 28.7
THA.LOC104798954 Tarenaya hassleriana HOM05D006374 ORTHO05D006349 3.1e-24 116.7 249 32.1
DCAR_026222 Daucus carota HOM05D001045 ORTHO05D001542 6.9e-24 115.5 284 33.8
PSO339G5603 Papaver somniferum HOM05D006374 ORTHO05D006349 9.0e-24 115.2 296 28.0
FAN25G0911 Fragaria x ananassa HOM05D006374 ORTHO05D006349 1.2e-23 114.8 189 34.4
Aqoxy5G04000 Aquilegia oxysepala HOM05D001292 ORTHO05D006349 2.0e-23 114.0 222 32.9
ClCG03G003510 Citrullus lanatus HOM05D006374 ORTHO05D006349 2.0e-23 114.0 189 34.9
EL10Ac4g07621 Beta vulgaris HOM05D006374 ORTHO05D006349 3.4e-23 113.2 227 32.2
CsaV3_1G009310 Cucumis sativus L. HOM05D006374 ORTHO05D006349 4.5e-23 112.8 180 35.0
AT3G48480 Arabidopsis thaliana HOM05D006374 ORTHO05D006349 7.6e-23 112.1 229 34.1
MELO3C002334.2 Cucumis melo HOM05D006374 ORTHO05D006349 1.0e-22 111.7 201 33.8
Zm00001eb168510 Zea mays HOM05D006374 ORTHO05D006349 2.2e-22 110.5 182 35.2
Carub.0005s1466 Capsella rubella HOM05D006374 ORTHO05D006349 3.8e-22 109.8 213 35.2
AUR62026946 Chenopodium quinoa HOM05D006374 ORTHO05D006349 3.2e-21 106.7 143 38.5
FAN13G0453 Fragaria x ananassa HOM05D006374 ORTHO05D006349 1.6e-20 104.4 150 36.0
Gohir.D07G055900 Gossypium hirsutum HOM05D006374 ORTHO05D006349 3.5e-20 103.2 138 42.0
Gohir.A07G051500 Gossypium hirsutum HOM05D006374 ORTHO05D006349 6.0e-20 102.4 138 42.0
Aa31LG4G17070 Aethionema arabicum HOM05D006374 ORTHO05D006349 7.9e-20 102.1 199 30.7
BraA06t25705Z Brassica rapa HOM05D006374 ORTHO05D006349 7.9e-20 102.1 176 38.6
CARHR157240 Cardamine hirsuta HOM05D006374 ORTHO05D006349 7.9e-20 102.1 170 33.5
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 3.9e-19 99.8 212 29.7
Sp5g13550 Schrenkiella parvula HOM05D006374 ORTHO05D006349 8.7e-19 98.6 184 32.6
AUR62017054 Chenopodium quinoa HOM05D006374 ORTHO05D006349 1.9e-18 97.4 207 30.4
Os11g0214001 Oryza sativa ssp. japonica HOM05D006374 ORTHO05D006349 5.7e-18 95.9 217 30.4
Hund23135 Selenicereus undatus HOM05D006374 ORTHO05D006349 7.4e-18 95.5 192 32.3
BcaB02g10649 Brassica carinata HOM05D006374 ORTHO05D006349 9.6e-18 95.1 184 33.2
Actinidia33103 Actinidia chinensis HOM05D006374 ORTHO05D006349 2.1e-17 94.0 166 34.9
A06p27690 Brassica napus HOM05D006374 ORTHO05D006349 2.1e-17 94.0 196 34.2
BcaC01g02345 Brassica carinata HOM05D006374 ORTHO05D006349 2.8e-17 93.6 199 33.2
AUR62040664 Chenopodium quinoa HOM05D006374 ORTHO05D006349 3.7e-17 93.2 203 30.0
AUR62044358 Chenopodium quinoa HOM05D006374 ORTHO05D006349 3.7e-17 93.2 203 30.0
Cc01_g06810 Coffea canephora HOM05D006374 ORTHO05D006349 4.8e-17 92.8 67 64.2
PGSC0003DMG402023161 Solanum tuberosum HOM05D006374 ORTHO05D006349 4.1e-16 89.7 69 59.4
arahy.Tifrunner.gnm1.ann1.RTUG1E Arachis hypogaea HOM05D006374 ORTHO05D006349 4.5e-15 86.3 73 56.2
DCAR_024275 Daucus carota HOM05D017553 ORTHO05D006349 7.6e-15 85.5 181 30.4
C03p66330 Brassica napus HOM05D006374 ORTHO05D006349 1.0e-14 85.1 246 29.3
SGA_v2.0_scaffold29G12157 Striga asiatica HOM05D006374 ORTHO05D006349 1.3e-14 84.7 185 29.2
BolC3t18904H Brassica oleracea HOM05D006374 ORTHO05D006349 5.0e-14 82.8 227 29.1
SEGI_32304 Sequoiadendron giganteum HOM05D006374 ORTHO05D006349 8.4e-14 82.0 126 34.1
AUR62041753 Chenopodium quinoa HOM05D006374 ORTHO05D006349 4.2e-13 79.7 73 50.7
DCAR_029290 Daucus carota HOM05D014044 ORTHO05D006349 5.5e-13 79.3 199 26.6
MBI11_g19364_MAGBIO Magnolia biondii HOM05D006374 ORTHO05D006349 5.5e-13 79.3 187 29.4
DCAR_017413 Daucus carota HOM05D014044 ORTHO05D006349 1.2e-12 78.2 197 25.9
FAN04G3207 Fragaria x ananassa HOM05D006374 ORTHO05D006349 1.6e-12 77.8 73 47.9
Sed0019471 Sechium edule HOM05D006374 ORTHO05D006349 1.6e-12 77.8 86 44.2
Cpa.g.sc4.71 Carica papaya HOM05D006374 ORTHO05D006349 1.3e-11 74.7 181 31.5
AL5G27890 Arabidopsis lyrata HOM05D006374 ORTHO05D006349 2.3e-11 73.9 146 33.6
DCAR_015986 Daucus carota HOM05D008184 ORTHO05D010791 3.0e-11 73.6 188 27.7
TWI18G0954 Tripterygium wilfordii HOM05D006374 ORTHO05D006349 3.0e-11 73.6 68 48.5
Cc01_g06800 Coffea canephora HOM05D006374 ORTHO05D006349 1.1e-10 71.6 56 53.6
Haze_07271 Corylus avellana HOM05D006374 ORTHO05D006349 1.5e-10 71.2 128 32.0
DCAR_018007 Daucus carota HOM05D001292 ORTHO05D006349 1.3e-09 68.2 169 29.0
DCAR_005456 Daucus carota HOM05D014044 ORTHO05D006349 2.2e-09 67.4 157 28.0
Actinidia25584 Actinidia chinensis HOM05D006374 ORTHO05D006349 8.2e-09 65.5 50 52.0
DCAR_022708 Daucus carota HOM05D010862 ORTHO05D010791 2.4e-08 63.9 160 28.1
Nitab4.5_0000467g0140 Nicotiana tabacum HOM05D006374 ORTHO05D006349 2.0e-07 60.8 77 39.0
DCAR_005060 Daucus carota HOM05D017553 ORTHO05D010791 3.4e-07 60.1 76 44.7
COL.COLO4_32386 Corchorus olitorius HOM05D001292 ORTHO05D001202 3.8e-06 56.6 139 22.3


User provided reference genes

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