Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006629 Daucus carota HOM05D005245 ORTHO05D006388 0.0e+00 1631.7 869 100.0
DCAR_025312 Daucus carota HOM05D005245 ORTHO05D006388 1.5e-193 680.6 961 46.9
Hma1.2p1_0002F.1_g002540 Hydrangea macrophylla HOM05D005245 ORTHO05D006388 8.7e-112 409.1 882 35.9
Lj8C105T4 Lonicera japonica HOM05D005245 ORTHO05D006388 7.4e-111 406.0 789 39.2
CSS0021355 Camellia sinensis var. sinensis HOM05D005245 ORTHO05D006388 2.6e-108 397.5 772 39.2
Dinv03891 Davidia involucrata HOM05D005245 ORTHO05D006388 3.3e-103 380.6 712 41.4
Nitab4.5_0002629g0110 Nicotiana tabacum HOM05D005245 ORTHO05D006388 1.7e-99 368.2 860 35.1
Nitab4.5_0006823g0030 Nicotiana tabacum HOM05D005245 ORTHO05D006388 8.7e-96 355.9 873 35.1
Peaxi162Scf00189g00017 Petunia axillaris HOM05D005245 ORTHO05D006388 1.1e-93 349.0 875 33.8
PGSC0003DMG400009404 Solanum tuberosum HOM05D005245 ORTHO05D006388 1.1e-93 349.0 879 34.9
Sopen07g027400 Solanum pennellii HOM05D005245 ORTHO05D006388 5.9e-92 343.2 868 36.2
Actinidia30446 Actinidia chinensis HOM05D005245 ORTHO05D006388 8.4e-91 339.3 746 36.9
Gohir.D10G112600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 9.3e-90 335.9 753 35.5
Gorai.011G124400 Gossypium raimondii HOM05D005245 ORTHO05D006388 2.1e-89 334.7 753 35.5
Gohir.A10G153600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 3.5e-89 334.0 753 35.9
Dinv19977 Davidia involucrata HOM05D005245 ORTHO05D006388 6.1e-89 333.2 877 33.9
Haze_13315 Corylus avellana HOM05D005245 ORTHO05D006388 3.9e-88 330.5 766 34.7
Thecc.01G241800 Theobroma cacao HOM05D005245 ORTHO05D006388 9.7e-87 325.9 865 34.1
Actinidia39337 Actinidia chinensis HOM05D005245 ORTHO05D006388 6.3e-86 323.2 882 33.8
Cfa014695 Carpinus fangiana HOM05D005245 ORTHO05D006388 1.8e-85 321.6 814 33.9
Duzib264G0025 Durio zibethinus HOM05D005245 ORTHO05D006388 1.8e-85 321.6 751 36.1
Rhsim04G0072600 Rhododendron simsii HOM05D005245 ORTHO05D006388 6.9e-85 319.7 957 33.6
Lsat_1_v5_gn_8_137601 Lactuca sativa HOM05D005245 ORTHO05D006388 3.4e-84 317.4 877 33.2
TAR626G0262 Trochodendron aralioides HOM05D005245 ORTHO05D006388 1.3e-83 315.5 750 31.1
TAR316G0002 Trochodendron aralioides HOM05D005245 ORTHO05D006388 3.8e-83 313.9 754 32.4
CAN.G1543.11 Capsicum annuum HOM05D005245 ORTHO05D006388 1.4e-82 312.0 883 33.2
Potri.019G091700 Populus trichocarpa HOM05D005245 ORTHO05D006388 3.2e-82 310.8 863 32.1
Prupe.8G044600 Prunus persica HOM05D005245 ORTHO05D006388 7.2e-82 309.7 859 33.6
Sabra19G0105000 Salix brachista HOM05D005245 ORTHO05D006388 2.7e-81 307.8 869 34.2
GSVIVG01020660001 Vitis vinifera HOM05D005245 ORTHO05D006388 1.0e-80 305.8 754 31.4
QL08p043062 Quercus lobata HOM05D005245 ORTHO05D006388 8.8e-80 302.8 893 32.4
Oeu031086.1 Olea europaea HOM05D005245 ORTHO05D006388 1.5e-79 302.0 765 32.2
Sed0004663 Sechium edule HOM05D005245 ORTHO05D006388 4.3e-79 300.4 836 33.6
Manes.13G138100 Manihot esculenta HOM05D005245 ORTHO05D006388 9.7e-79 299.3 869 32.8
TWI59G0121 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 9.7e-79 299.3 748 31.8
Nn1g09000 Nelumbo nucifera HOM05D005245 ORTHO05D006388 1.3e-78 298.9 764 31.3
HanXRQChr17g0554751 Helianthus annuus HOM05D005245 ORTHO05D006388 2.2e-78 298.1 853 33.5
Ciclev10014152m.g Citrus clementina HOM05D005245 ORTHO05D006388 3.7e-78 297.4 882 34.6
Migut.M00189 Erythranthe guttata HOM05D005245 ORTHO05D006388 3.1e-77 294.3 768 31.5
ClCG02G018020 Citrullus lanatus HOM05D005245 ORTHO05D006388 9.1e-77 292.7 878 32.5
Oeu000569.1 Olea europaea HOM05D005245 ORTHO05D006388 1.2e-76 292.4 755 31.0
Oeu036088.3 Olea europaea HOM05D005245 ORTHO05D006388 2.6e-76 291.2 737 32.0
Solyc07g053440.4 Solanum lycopersicum HOM05D005245 ORTHO05D006388 4.5e-76 290.4 865 32.3
SGA_v2.0_scaffold106G30663 Striga asiatica HOM05D005245 ORTHO05D006388 7.7e-76 289.7 755 33.9
Cpa.g.sc209.10 Carica papaya HOM05D005245 ORTHO05D006388 1.0e-75 289.3 774 31.8
Potri.013G119700 Populus trichocarpa HOM05D005245 ORTHO05D006388 1.0e-75 289.3 862 31.3
unitig_899.g15324 Utricularia gibba HOM05D005245 ORTHO05D006388 1.7e-75 288.5 707 31.4
CiPaw.04G130500 Carya illinoinensis HOM05D005245 ORTHO05D006388 2.2e-75 288.1 879 31.2
SalBow7G1067 Salvia bowleyana HOM05D005245 ORTHO05D006388 3.8e-75 287.3 751 32.1
THA.LOC104822691 Tarenaya hassleriana HOM05D005245 ORTHO05D006388 3.2e-74 284.3 767 30.8
TWI23G1119 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 9.4e-74 282.7 738 32.0
ECA233G0823 Erigeron canadensis HOM05D005245 ORTHO05D006388 2.7e-73 281.2 749 34.3
Ca_18900_v3 Cicer arietinum L. HOM05D005245 ORTHO05D006388 3.6e-73 280.8 832 32.2
CsaV3_6G015240 Cucumis sativus L. HOM05D005245 ORTHO05D006388 6.1e-73 280.0 892 32.5
MD17G1128800 Malus domestica HOM05D005245 ORTHO05D006388 6.1e-73 280.0 802 31.7
MD09G1139300 Malus domestica HOM05D005245 ORTHO05D006388 8.8e-72 276.2 867 30.9
FAN09G0613 Fragaria x ananassa HOM05D005245 ORTHO05D006388 2.2e-70 271.6 898 30.8
MBI06_g25721_MAGBIO Magnolia biondii HOM05D005245 ORTHO05D006388 2.8e-70 271.2 751 29.8
RcHm_v2.0_Chr2g0128861 Rosa chinensis HOM05D005245 ORTHO05D006388 5.9e-68 263.5 786 30.5
Atru.chr6.2836 Acer truncatum HOM05D005245 ORTHO05D006388 1.3e-67 262.3 876 32.4
AL5G39800 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 1.7e-67 261.9 830 29.4
Lj3g0023683 Lotus japonicus HOM05D005245 ORTHO05D006388 2.2e-67 261.5 784 31.6
Psat7g166560 Pisum sativum HOM05D005245 ORTHO05D006388 2.2e-67 261.5 842 29.9
Thhalv10005785m.g Eutrema salsugineum HOM05D005245 ORTHO05D006388 2.9e-67 261.2 818 31.1
Lalb_Chr01g0005921 Lupinus albus HOM05D005245 ORTHO05D006388 2.9e-67 261.2 871 30.7
EL10Ac9g20856 Beta vulgaris HOM05D005245 ORTHO05D006388 1.1e-66 259.2 832 29.9
arahy.Tifrunner.gnm1.ann1.MS8YUN Arachis hypogaea HOM05D005245 ORTHO05D006388 1.5e-66 258.8 892 31.5
AUR62024070 Chenopodium quinoa HOM05D005245 ORTHO05D006388 1.9e-66 258.5 779 30.6
CARHR168460 Cardamine hirsuta HOM05D005245 ORTHO05D006388 2.5e-66 258.1 841 31.3
CANSAT64G0642 Cannabis sativa HOM05D005245 ORTHO05D006388 3.2e-66 257.7 853 30.5
AT3G58110 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 4.2e-66 257.3 763 31.3
Hund00957 Selenicereus undatus HOM05D005245 ORTHO05D006388 5.5e-66 256.9 916 29.4
arahy.Tifrunner.gnm1.ann1.BT5S0A Arachis hypogaea HOM05D005245 ORTHO05D006388 1.2e-65 255.8 874 31.0
FvH4_6g27000 Fragaria vesca HOM05D005245 ORTHO05D006388 1.6e-65 255.4 869 30.6
CARHR137420 Cardamine hirsuta HOM05D005245 ORTHO05D006388 2.7e-65 254.6 750 30.0
Carub.0005s2496 Capsella rubella HOM05D005245 ORTHO05D006388 4.7e-65 253.8 835 29.7
Sp5g04610 Schrenkiella parvula HOM05D005245 ORTHO05D006388 2.3e-64 251.5 745 31.3
PGR042G2390 Punica granatum HOM05D005245 ORTHO05D006388 3.0e-64 251.1 850 29.2
PSO782G4194 Papaver somniferum HOM05D005245 ORTHO05D006388 4.0e-64 250.8 848 29.1
TPR.G14943 Trifolium pratense HOM05D005245 ORTHO05D006388 4.0e-64 250.8 847 29.4
Medtr4g079510 Medicago truncatula HOM05D005245 ORTHO05D006388 5.2e-64 250.4 782 32.0
Lalb_Chr19g0134981 Lupinus albus HOM05D005245 ORTHO05D006388 6.7e-64 250.0 847 30.3
Lalb_Chr03g0029811 Lupinus albus HOM05D005245 ORTHO05D006388 5.7e-63 246.9 875 30.4
PSO384G4553 Papaver somniferum HOM05D005245 ORTHO05D006388 9.7e-63 246.1 768 30.3
AUR62038992 Chenopodium quinoa HOM05D005245 ORTHO05D006388 1.4e-61 242.3 886 28.2
Aqoxy1G02205 Aquilegia oxysepala HOM05D005245 ORTHO05D006388 4.1e-61 240.7 766 29.4
Phvul.011G116900 Phaseolus vulgaris HOM05D005245 ORTHO05D006388 5.3e-61 240.4 844 29.0
VMungo1127G0185 Vigna mungo HOM05D005245 ORTHO05D006388 5.3e-61 240.4 864 30.1
PSO063G4059 Papaver somniferum HOM05D005245 ORTHO05D006388 9.1e-61 239.6 930 29.7
A07p23880 Brassica napus HOM05D005245 ORTHO05D006388 2.7e-60 238.0 734 30.5
Sc12g0003330 Simmondsia chinensis HOM05D005245 ORTHO05D006388 2.7e-60 238.0 883 27.3
AT2G42370 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 3.5e-60 237.7 740 28.4
C06p25110 Brassica napus HOM05D005245 ORTHO05D006388 3.5e-60 237.7 737 28.8
HanXRQChr17g0560461 Helianthus annuus HOM05D005245 ORTHO05D006388 1.0e-59 236.1 813 34.8
BolC6t37670H Brassica oleracea HOM05D005245 ORTHO05D006388 1.3e-59 235.7 737 28.6
RcHm_v2.0_Chr5g0053351 Rosa chinensis HOM05D005245 ORTHO05D006388 2.9e-59 234.6 793 30.0
BcaC08g44897 Brassica carinata HOM05D005245 ORTHO05D006388 3.8e-59 234.2 737 30.3
AL4G40790 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 4.2e-58 230.7 752 28.6
BraA07t30041Z Brassica rapa HOM05D005245 ORTHO05D006388 4.2e-58 230.7 735 29.1
Eucgr.A01888 Eucalyptus grandis HOM05D005245 ORTHO05D006388 4.2e-58 230.7 783 30.9
Ah.01g003870 Amaranthus hybridus HOM05D005245 ORTHO05D006388 5.5e-58 230.3 855 26.7
Lalb_Chr22g0356801 Lupinus albus HOM05D005245 ORTHO05D006388 7.2e-58 229.9 810 30.2
PSO339G1987 Papaver somniferum HOM05D005245 ORTHO05D006388 9.4e-58 229.6 855 28.4
SHI10497 Sapria himalayana HOM05D005245 ORTHO05D006388 1.5e-55 222.2 788 27.9
BcaB02g07551 Brassica carinata HOM05D005245 ORTHO05D006388 4.8e-54 217.2 755 30.5
TAR627G0756 Trochodendron aralioides HOM05D005245 ORTHO05D006388 6.3e-54 216.9 673 29.3
CDE10G0023 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 2.0e-52 211.8 749 26.7
FvH4_3g11260 Fragaria vesca HOM05D005245 ORTHO05D006388 1.8e-48 198.7 762 27.7
COL.COLO4_10076 Corchorus olitorius HOM05D005245 ORTHO05D006388 2.3e-48 198.4 301 41.9
Glyma.06G284801 Glycine max HOM05D005245 ORTHO05D006388 3.5e-44 184.5 209 47.8
FAN21G3056 Fragaria x ananassa HOM05D005245 ORTHO05D006388 2.9e-43 181.4 760 28.3
ATR0602G272 Amborella trichopoda HOM05D005245 ORTHO05D006388 1.2e-41 176.0 839 25.7
COL.COLO4_23697 Corchorus olitorius HOM05D005245 ORTHO05D006388 2.3e-40 171.8 267 40.4
MELO3C019743.2 Cucumis melo HOM05D005245 ORTHO05D006388 1.3e-38 166.0 279 40.5
Sabra13G0101100 Salix brachista HOM05D005245 ORTHO05D006388 2.4e-37 161.8 619 28.8
BcaB02g07550 Brassica carinata HOM05D005245 ORTHO05D006388 3.2e-37 161.4 211 41.2
CsaV3_3G019350 Cucumis sativus L. HOM05D005245 ORTHO05D006388 5.0e-35 154.1 200 46.0
CDE10G0522 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 8.0e-33 146.7 832 22.8
HPP92_024035 Vanilla planifolia HOM05D005245 ORTHO05D006388 1.0e-32 146.4 834 25.1
BcaC08g44896 Brassica carinata HOM05D005245 ORTHO05D006388 6.4e-30 137.1 173 42.2
HPP92_005198 Vanilla planifolia HOM05D005245 ORTHO05D006388 6.6e-27 127.1 707 22.1
Cc02_g14370 Coffea canephora HOM05D005245 ORTHO05D006388 1.9e-26 125.6 295 33.2
CDE10G0045 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 2.8e-25 121.7 172 37.2
Atru.chr3.860 Acer truncatum HOM05D005245 ORTHO05D006388 4.7e-25 120.9 286 33.9
Glyma.12G121100 Glycine max HOM05D005245 ORTHO05D006388 6.2e-25 120.6 147 43.5
Cc05_g08020 Coffea canephora HOM05D005245 ORTHO05D006388 5.2e-24 117.5 457 28.9
Sabra13G0101200 Salix brachista HOM05D005245 ORTHO05D006388 5.8e-23 114.0 146 45.9
SGA_v2.0_scaffold51G18646 Striga asiatica HOM05D005245 ORTHO05D006388 1.9e-21 109.0 277 31.8
ECA233G3350 Erigeron canadensis HOM05D005245 ORTHO05D006388 5.6e-18 97.4 185 35.1
unitig_62.g23335 Utricularia gibba HOM05D005245 ORTHO05D006388 9.5e-18 96.7 129 37.2
SGA_v2.0_scaffold51G18645 Striga asiatica HOM05D005245 ORTHO05D006388 2.6e-15 88.6 258 29.5
Zm00001eb238770 Zea mays HOM05D005245 ORTHO05D006388 9.2e-13 80.1 235 29.4
Zm00001eb204940 Zea mays HOM05D005245 ORTHO05D006388 1.2e-12 79.7 221 31.7
Os06g0538200 Oryza sativa ssp. japonica HOM05D005245 ORTHO05D006388 5.1e-11 74.3 783 21.5
SEGI_35055 Sequoiadendron giganteum HOM05D005245 ORTHO05D006388 2.8e-09 68.6 287 26.1
RcHm_v2.0_Chr4g0423021 Rosa chinensis HOM05D005245 ORTHO05D006388 1.8e-08 65.9 76 44.7
Zm00001eb238760 Zea mays HOM05D005245 ORTHO05D006388 1.5e-07 62.8 244 29.1


User provided reference genes

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