Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 2.8e-213 745.0 368 100.0
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.6e-134 482.6 368 64.7
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.2e-133 479.6 363 63.6
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.2e-133 479.6 366 63.4
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 2.9e-133 479.2 362 65.7
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 1.6e-128 463.4 366 61.2
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 1.6e-128 463.4 366 62.3
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 2.8e-128 462.6 384 60.9
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 1.1e-127 460.7 366 62.0
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 6.9e-127 458.0 368 63.0
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 5.8e-126 454.9 368 61.1
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 1.3e-125 453.8 368 60.9
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 2.2e-125 453.0 368 60.6
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 3.8e-125 452.2 366 60.9
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 4.9e-125 451.8 358 62.3
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 4.2e-124 448.7 359 62.7
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 7.1e-124 448.0 360 62.5
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 9.3e-124 447.6 365 60.3
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.6e-123 446.8 367 61.3
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 2.7e-123 446.0 368 59.2
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 6.0e-123 444.9 367 61.3
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 7.9e-123 444.5 367 61.3
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 7.9e-123 444.5 368 59.2
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 1.0e-122 444.1 358 62.3
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 1.3e-122 443.7 367 60.5
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 1.8e-122 443.4 365 59.2
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 1.8e-122 443.4 367 61.0
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 2.3e-122 443.0 361 59.8
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 8.7e-122 441.0 368 60.9
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.1e-121 440.7 367 60.8
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 9.7e-121 437.6 358 61.2
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 9.7e-121 437.6 367 58.0
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 1.3e-120 437.2 366 58.5
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 1.3e-120 437.2 362 60.5
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 2.2e-120 436.4 366 59.8
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 3.7e-120 435.6 369 58.5
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 6.3e-120 434.9 363 57.6
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 1.4e-119 433.7 369 58.5
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 4.1e-119 432.2 365 58.6
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 5.3e-119 431.8 335 63.6
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 1.2e-118 430.6 366 58.2
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 1.0e-117 427.6 368 57.3
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 1.0e-117 427.6 371 58.8
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.9e-117 426.0 371 58.5
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 3.8e-117 425.6 365 57.3
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 5.0e-117 425.2 371 58.2
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 5.0e-117 425.2 398 53.5
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 6.5e-117 424.9 368 57.6
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 1.1e-116 424.1 365 56.4
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 1.1e-116 424.1 360 57.2
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 1.1e-116 424.1 398 53.5
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 1.4e-116 423.7 362 58.3
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 3.2e-116 422.5 368 57.1
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 3.2e-116 422.5 368 57.1
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 3.2e-116 422.5 370 56.2
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 4.2e-116 422.2 368 57.1
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 5.5e-116 421.8 368 57.3
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 1.6e-115 420.2 361 58.2
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 2.1e-115 419.9 365 57.5
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 2.1e-115 419.9 368 57.1
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 2.7e-115 419.5 368 56.5
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.7e-115 419.5 382 57.9
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 3.6e-115 419.1 361 58.2
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 3.6e-115 419.1 419 53.9
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 1.4e-114 417.2 368 57.6
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.8e-114 416.8 368 58.2
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.3e-114 416.4 382 57.3
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 5.1e-114 415.2 368 56.0
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 5.1e-114 415.2 351 59.8
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 6.7e-114 414.8 366 53.8
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 1.9e-113 413.3 413 51.8
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 2.5e-113 412.9 365 56.4
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 2.5e-113 412.9 354 56.5
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 2.2e-112 409.8 354 56.8
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 3.7e-112 409.1 363 55.4
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 1.8e-111 406.8 328 60.4
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 2.4e-111 406.4 363 55.1
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 3.1e-111 406.0 365 55.3
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 4.1e-111 405.6 354 55.9
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 2.6e-110 402.9 356 54.8
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 2.2e-109 399.8 362 57.7
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 1.4e-108 397.1 357 57.7
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 3.2e-108 396.0 335 59.7
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 5.5e-108 395.2 390 55.4
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 3.0e-106 389.4 368 54.1
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 7.4e-105 384.8 362 53.6
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 7.4e-105 384.8 368 54.6
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 3.1e-103 379.4 327 59.9
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 5.3e-103 378.6 363 51.8
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.2e-102 377.5 368 54.6
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 1.8e-98 363.6 361 52.9
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 1.1e-97 360.9 366 50.3
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 9.7e-97 357.8 270 61.1
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 2.4e-95 353.2 366 50.8
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 3.1e-95 352.8 330 55.2
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 3.8e-93 345.9 291 60.8
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 6.5e-93 345.1 312 55.8
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 1.2e-91 340.9 236 68.6
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 1.2e-86 324.3 359 48.2
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 2.7e-86 323.2 299 54.2
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 5.9e-86 322.0 363 49.3
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 4.2e-84 315.8 280 58.2
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 5.2e-82 308.9 368 47.6
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 1.7e-80 303.9 194 72.2
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 3.4e-73 279.6 181 71.8
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 3.7e-72 276.2 214 62.1
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 6.3e-72 275.4 365 42.2
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 1.1e-71 274.6 244 56.6
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 1.0e-69 268.1 369 39.0
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 1.5e-68 264.2 373 39.9
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 1.0e-66 258.1 361 40.2
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 1.8e-66 257.3 366 39.1
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 2.6e-65 253.4 165 70.3
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 2.0e-62 243.8 366 43.4
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 5.6e-52 209.1 170 61.2
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 3.2e-47 193.4 150 61.3
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 4.1e-47 193.0 123 68.3
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.9e-44 184.1 204 49.5
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 6.8e-42 175.6 270 39.6
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 6.8e-42 175.6 192 44.8
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 5.1e-37 159.5 382 30.4
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 1.2e-33 148.3 235 43.8
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 3.4e-33 146.7 345 32.2
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 8.4e-32 142.1 176 43.2
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.1e-31 141.7 144 54.2
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 9.0e-26 122.1 394 27.2
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 8.4e-24 115.5 108 54.6
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 1.4e-15 88.2 69 58.0
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 9.3e-15 85.5 59 67.8
Os05g0295700 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 7.9e-14 82.4 63 57.1
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 2.8e-11 73.9 51 72.5
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 3.7e-11 73.6 55 61.8
SHI32711 Sapria himalayana HOM05D005903 ORTHO05D007293 2.0e-09 67.8 71 42.3
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 5.8e-09 66.2 66 47.0
Cfa001138 Carpinus fangiana HOM05D000398 ORTHO05D000551 4.6e-06 56.6 95 38.9


User provided reference genes

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