Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 1.6e-183 646.0 323 100.0
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 5.7e-133 478.0 313 74.4
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 1.5e-130 469.9 314 72.3
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 6.1e-127 458.0 315 69.8
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 4.3e-125 451.8 294 72.4
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 1.3e-124 450.3 283 73.9
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 3.7e-124 448.7 299 71.6
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 1.4e-123 446.8 316 67.7
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 2.6e-122 442.6 312 67.3
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 3.4e-122 442.2 308 70.1
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 5.9e-122 441.4 305 70.5
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 2.2e-121 439.5 302 67.9
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 5.0e-121 438.3 311 68.8
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 1.1e-120 437.2 341 63.6
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 1.4e-120 436.8 315 68.6
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 1.9e-120 436.4 316 69.3
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 7.2e-120 434.5 323 66.6
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 1.4e-118 430.3 316 64.9
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 1.8e-118 429.9 302 68.2
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.3e-118 429.5 304 67.4
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 1.1e-117 427.2 302 68.5
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 2.8e-116 422.5 295 67.5
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 4.8e-116 421.8 315 65.4
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 4.8e-116 421.8 313 64.5
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 1.8e-115 419.9 316 62.0
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 4.1e-115 418.7 319 64.9
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 6.9e-115 417.9 302 67.5
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 1.2e-114 417.2 313 65.8
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 2.0e-114 416.4 312 64.4
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 4.5e-114 415.2 294 66.7
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 2.9e-113 412.5 298 66.1
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 1.4e-112 410.2 316 60.8
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 1.9e-112 409.8 302 65.6
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 7.2e-112 407.9 300 65.3
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 2.1e-111 406.4 286 67.5
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 2.7e-111 406.0 295 66.4
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 3.6e-111 405.6 296 66.2
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 4.7e-111 405.2 312 63.8
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 4.7e-111 405.2 290 69.3
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.8e-110 403.3 273 72.2
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 3.9e-110 402.1 310 63.9
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 8.8e-110 401.0 307 64.5
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 8.8e-110 401.0 295 65.1
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 2.0e-109 399.8 304 64.1
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 7.4e-109 397.9 298 62.4
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 1.7e-108 396.7 268 69.8
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 1.8e-107 393.3 301 64.1
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 3.1e-107 392.5 290 63.4
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 7.0e-107 391.3 298 61.7
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 3.5e-106 389.0 297 62.0
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 7.7e-106 387.9 300 60.3
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 1.0e-105 387.5 297 62.0
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 1.0e-105 387.5 293 61.1
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 1.7e-105 386.7 292 64.0
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 5.0e-105 385.2 298 61.7
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 2.5e-104 382.9 321 58.9
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 1.2e-103 380.6 299 60.2
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 2.1e-103 379.8 301 59.5
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 2.7e-103 379.4 298 60.1
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 8.0e-103 377.9 298 59.7
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.4e-102 377.1 356 56.7
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 4.0e-102 375.6 298 60.4
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 1.5e-101 373.6 291 61.2
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 1.5e-101 373.6 291 61.2
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 2.6e-101 372.9 291 61.5
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 1.3e-100 370.5 290 60.3
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 5.0e-97 358.6 320 56.2
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 1.1e-96 357.5 317 55.5
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.5e-96 356.3 254 66.1
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 9.4e-96 354.4 293 60.4
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.0e-94 350.9 248 68.1
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 2.3e-94 349.7 300 59.7
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.2e-93 347.4 296 59.8
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 5.7e-93 345.1 298 54.4
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 2.8e-92 342.8 322 55.6
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 1.0e-86 324.3 322 51.6
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 8.9e-86 321.2 313 56.5
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 4.1e-83 312.4 207 71.0
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 1.5e-80 303.9 204 70.6
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 3.4e-77 292.7 349 51.0
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 2.9e-76 289.7 212 64.6
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 9.2e-75 284.6 206 65.0
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 1.6e-74 283.9 269 55.8
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 1.7e-73 280.4 207 63.3
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 8.6e-73 278.1 209 64.1
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 3.3e-72 276.2 321 42.7
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.6e-71 273.9 273 56.8
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 7.0e-67 258.5 242 55.4
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 6.0e-58 228.8 274 44.9
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 5.6e-56 222.2 179 62.0
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 2.2e-52 210.3 286 43.0
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 1.0e-49 201.4 290 41.4
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 5.1e-49 199.1 317 40.4
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 9.6e-48 194.9 123 71.5
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 2.8e-47 193.4 210 46.7
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 1.5e-40 171.0 110 76.4
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 1.6e-39 167.5 127 59.8
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 2.8e-39 166.8 144 59.7
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 5.8e-37 159.1 294 32.0
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 1.9e-35 154.1 97 74.2
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.6e-34 151.0 110 69.1
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.0e-33 148.3 97 75.3
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.1e-30 138.3 92 70.7
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 9.3e-27 125.2 79 62.0
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 1.8e-25 120.9 178 43.3
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.8e-25 120.9 74 73.0
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.0e-25 120.2 74 73.0
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 5.1e-25 119.4 155 38.7
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 7.4e-24 115.5 80 65.0
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 4.0e-22 109.8 285 27.7
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 2.7e-18 97.1 91 53.8
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 1.9e-16 90.9 82 52.4
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 4.2e-11 73.2 42 78.6
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 1.4e-09 68.2 135 34.8
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.1e-08 65.1 152 32.2
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.1e-08 65.1 152 32.2
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 5.7e-08 62.8 152 31.6
MBI14_g30460_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D014525 1.8e-06 57.8 38 65.8


User provided reference genes

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