Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002637 Daucus carota HOM05D005547 ORTHO05D006887 5.8e-52 207.2 101 100.0
Ah.03g147190 Amaranthus hybridus HOM05D005547 ORTHO05D006887 3.9e-40 167.9 96 81.2
Atru.chr11.1034 Acer truncatum HOM05D005547 ORTHO05D006887 9.6e-39 163.3 100 81.0
ClCG11G000640 Citrullus lanatus HOM05D005547 ORTHO05D006887 1.6e-38 162.5 92 84.8
COL.COLO4_27546 Corchorus olitorius HOM05D005547 ORTHO05D006887 1.6e-38 162.5 98 80.6
Ciclev10017277m.g Citrus clementina HOM05D005547 ORTHO05D006887 2.1e-38 162.2 103 77.7
MD13G1013300 Malus domestica HOM05D005547 ORTHO05D006887 2.8e-38 161.8 98 79.6
Duzib251G0939 Durio zibethinus HOM05D005547 ORTHO05D006887 8.2e-38 160.2 98 78.6
Thecc.02G300400 Theobroma cacao HOM05D005547 ORTHO05D006887 8.2e-38 160.2 98 78.6
Prupe.1G340400 Prunus persica HOM05D005547 ORTHO05D006887 1.1e-37 159.8 98 77.6
Duzib248G0639 Durio zibethinus HOM05D005547 ORTHO05D006887 1.4e-37 159.5 98 76.5
Gohir.A03G114100 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.4e-37 159.5 98 79.6
Gohir.D02G138500 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.4e-37 159.5 98 79.6
Gorai.005G154900 Gossypium raimondii HOM05D005547 ORTHO05D006887 1.4e-37 159.5 98 79.6
Gorai.005G155000 Gossypium raimondii HOM05D005547 ORTHO05D006887 1.4e-37 159.5 98 79.6
Duzib268G1003 Durio zibethinus HOM05D005547 ORTHO05D006887 1.8e-37 159.1 98 78.6
MD16G1010200 Malus domestica HOM05D005547 ORTHO05D006887 1.8e-37 159.1 98 77.6
ATR0807G170 Amborella trichopoda HOM05D005547 ORTHO05D006887 2.4e-37 158.7 99 75.8
Gohir.D02G138400 Gossypium hirsutum HOM05D005547 ORTHO05D006887 3.1e-37 158.3 98 79.6
PGR142G0372 Punica granatum HOM05D005547 ORTHO05D006887 3.1e-37 158.3 98 79.6
Solyc04g008490.2 Solanum lycopersicum HOM05D005547 ORTHO05D006887 3.1e-37 158.3 100 77.0
Sopen04g003640 Solanum pennellii HOM05D005547 ORTHO05D006887 3.1e-37 158.3 100 77.0
Nitab4.5_0001091g0130 Nicotiana tabacum HOM05D005547 ORTHO05D006887 4.1e-37 157.9 104 76.0
MELO3C022540.2 Cucumis melo HOM05D005547 ORTHO05D006887 5.3e-37 157.5 92 82.6
Nitab4.5_0003889g0030 Nicotiana tabacum HOM05D005547 ORTHO05D006887 5.3e-37 157.5 97 80.4
Rhsim09G0081900 Rhododendron simsii HOM05D005547 ORTHO05D006887 5.3e-37 157.5 104 75.0
MSTRG.13653 Avicennia marina HOM05D005547 ORTHO05D006887 6.9e-37 157.1 99 76.8
MBI06_g19635_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 6.9e-37 157.1 95 75.8
MBI06_g29243_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 6.9e-37 157.1 95 75.8
Psat6g231800 Pisum sativum HOM05D005547 ORTHO05D006887 6.9e-37 157.1 98 79.6
Sc03g0005980 Simmondsia chinensis HOM05D005547 ORTHO05D006887 6.9e-37 157.1 98 78.6
Ah.02g120230 Amaranthus hybridus HOM05D005547 ORTHO05D006887 9.0e-37 156.8 96 78.1
CAN.G458.10 Capsicum annuum HOM05D005547 ORTHO05D006887 9.0e-37 156.8 100 76.0
Cfa015074 Carpinus fangiana HOM05D005547 ORTHO05D006887 9.0e-37 156.8 99 76.8
Lsat_1_v5_gn_5_36641 Lactuca sativa HOM05D005547 ORTHO05D006887 9.0e-37 156.8 93 76.3
Nn8g41124 Nelumbo nucifera HOM05D005547 ORTHO05D006887 9.0e-37 156.8 95 78.9
TAR295G0002 Trochodendron aralioides HOM05D005547 ORTHO05D006887 9.0e-37 156.8 97 76.3
TAR622G1295 Trochodendron aralioides HOM05D005547 ORTHO05D006887 9.0e-37 156.8 97 76.3
CANSAT78G0133 Cannabis sativa HOM05D005547 ORTHO05D006887 1.2e-36 156.4 96 78.1
SGA_v2.0_scaffold65G22157 Striga asiatica HOM05D005547 ORTHO05D006887 1.2e-36 156.4 100 76.0
Medtr1g112480 Medicago truncatula HOM05D005547 ORTHO05D006887 1.5e-36 156.0 101 74.3
Lalb_Chr21g0306901 Lupinus albus HOM05D005547 ORTHO05D006887 2.0e-36 155.6 98 76.5
Potri.010G099900 Populus trichocarpa HOM05D005547 ORTHO05D006887 2.6e-36 155.2 101 76.2
Nitab4.5_0000129g0490 Nicotiana tabacum HOM05D005547 ORTHO05D006887 3.4e-36 154.8 104 74.0
Oeu024849.1 Olea europaea HOM05D005547 ORTHO05D006887 3.4e-36 154.8 102 74.5
QL03p040577 Quercus lobata HOM05D005547 ORTHO05D006887 4.5e-36 154.5 98 74.5
QL03p040948 Quercus lobata HOM05D005547 ORTHO05D006887 4.5e-36 154.5 98 74.5
TPR.G2488 Trifolium pratense HOM05D005547 ORTHO05D006887 4.5e-36 154.5 102 75.5
AUR62017789 Chenopodium quinoa HOM05D005547 ORTHO05D006887 5.9e-36 154.1 88 79.5
Hma1.2p1_0068F.1_g037220 Hydrangea macrophylla HOM05D005547 ORTHO05D006887 5.9e-36 154.1 94 80.9
Sabra10G0072400 Salix brachista HOM05D005547 ORTHO05D006887 7.6e-36 153.7 98 75.5
Sed0015045 Sechium edule HOM05D005547 ORTHO05D006887 7.6e-36 153.7 94 79.8
Ca_11205_v3 Cicer arietinum L. HOM05D005547 ORTHO05D006887 1.0e-35 153.3 98 76.5
Haze_11478 Corylus avellana HOM05D005547 ORTHO05D006887 1.0e-35 153.3 99 74.7
PSO063G0668 Papaver somniferum HOM05D005547 ORTHO05D006887 1.0e-35 153.3 95 74.7
Sabra08G0107500 Salix brachista HOM05D005547 ORTHO05D006887 1.0e-35 153.3 101 74.3
Sed0021722 Sechium edule HOM05D005547 ORTHO05D006887 1.0e-35 153.3 94 78.7
BcaC06g34084 Brassica carinata HOM05D005547 ORTHO05D006887 1.3e-35 152.9 102 75.5
C07p32870 Brassica napus HOM05D005547 ORTHO05D006887 1.3e-35 152.9 102 75.5
BolC7t43802H Brassica oleracea HOM05D005547 ORTHO05D006887 1.3e-35 152.9 102 75.5
CiPaw.06G057000 Carya illinoinensis HOM05D005547 ORTHO05D006887 1.3e-35 152.9 100 76.0
Gohir.A03G114000 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.3e-35 152.9 98 78.6
Lalb_Chr02g0143381 Lupinus albus HOM05D005547 ORTHO05D006887 1.3e-35 152.9 98 77.6
Phvul.007G019800 Phaseolus vulgaris HOM05D005547 ORTHO05D006887 1.7e-35 152.5 96 79.2
MSTRG.2096 Avicennia marina HOM05D005547 ORTHO05D006887 2.2e-35 152.1 100 72.0
AUR62003480 Chenopodium quinoa HOM05D005547 ORTHO05D006887 2.2e-35 152.1 88 78.4
Eucgr.B02628 Eucalyptus grandis HOM05D005547 ORTHO05D006887 2.2e-35 152.1 102 72.5
THA.LOC104824108 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 2.2e-35 152.1 100 75.0
TWI77G0558 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 2.2e-35 152.1 99 76.8
TWI77G0905 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 2.2e-35 152.1 99 76.8
Migut.D01210 Erythranthe guttata HOM05D005547 ORTHO05D006887 2.9e-35 151.8 101 72.3
HanXRQChr12g0365891 Helianthus annuus HOM05D005547 ORTHO05D006887 2.9e-35 151.8 95 75.8
Manes.17G091700 Manihot esculenta HOM05D005547 ORTHO05D006887 3.8e-35 151.4 98 74.5
PSO782G2712 Papaver somniferum HOM05D005547 ORTHO05D006887 3.8e-35 151.4 95 73.7
Potri.008G141900 Populus trichocarpa HOM05D005547 ORTHO05D006887 3.8e-35 151.4 101 74.3
BcaB07g30360 Brassica carinata HOM05D005547 ORTHO05D006887 6.5e-35 150.6 103 72.8
CSS0022085 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 6.5e-35 150.6 103 75.7
CSS0041328 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 6.5e-35 150.6 103 75.7
BcaC04g21537 Brassica carinata HOM05D005547 ORTHO05D006887 1.1e-34 149.8 102 73.5
BcaC06g31254 Brassica carinata HOM05D005547 ORTHO05D006887 1.1e-34 149.8 102 73.5
BcaC06g31255 Brassica carinata HOM05D005547 ORTHO05D006887 1.1e-34 149.8 102 73.5
A09p23740 Brassica napus HOM05D005547 ORTHO05D006887 1.1e-34 149.8 102 73.5
C09p30580 Brassica napus HOM05D005547 ORTHO05D006887 1.1e-34 149.8 102 73.5
BolC9t55922H Brassica oleracea HOM05D005547 ORTHO05D006887 1.1e-34 149.8 102 73.5
BraA09t37975Z Brassica rapa HOM05D005547 ORTHO05D006887 1.1e-34 149.8 102 73.5
Thhalv10005178m.g Eutrema salsugineum HOM05D005547 ORTHO05D006887 1.1e-34 149.8 102 73.5
Manes.15G140700 Manihot esculenta HOM05D005547 ORTHO05D006887 1.1e-34 149.8 98 74.5
Sp2g13460 Schrenkiella parvula HOM05D005547 ORTHO05D006887 1.1e-34 149.8 102 73.5
TWI53G0286 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 1.1e-34 149.8 99 76.8
A06p43870 Brassica napus HOM05D005547 ORTHO05D006887 2.5e-34 148.7 102 72.5
BraA06t27263Z Brassica rapa HOM05D005547 ORTHO05D006887 2.5e-34 148.7 102 72.5
unitig_699.g19647 Utricularia gibba HOM05D005547 ORTHO05D006887 2.5e-34 148.7 100 71.0
HPP92_022540 Vanilla planifolia HOM05D005547 ORTHO05D006887 2.5e-34 148.7 103 70.9
THA.LOC104805110 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 3.2e-34 148.3 100 75.0
Cpa.g.sc2.79 Carica papaya HOM05D005547 ORTHO05D006887 5.5e-34 147.5 97 72.2
Lj5g0000051 Lotus japonicus HOM05D005547 ORTHO05D006887 5.5e-34 147.5 99 72.7
Os03g0129900 Oryza sativa ssp. japonica HOM05D005547 ORTHO05D006887 5.5e-34 147.5 102 70.6
RcHm_v2.0_Chr4g0445601 Rosa chinensis HOM05D005547 ORTHO05D006887 9.3e-34 146.7 98 71.4
A02p32590 Brassica napus HOM05D005547 ORTHO05D006887 1.2e-33 146.4 98 72.4
Carub.0005s0107 Capsella rubella HOM05D005547 ORTHO05D006887 4.6e-33 144.4 102 70.6
Glyma.20G108500 Glycine max HOM05D005547 ORTHO05D006887 6.1e-33 144.1 95 73.7
CARHR144680 Cardamine hirsuta HOM05D005547 ORTHO05D006887 7.9e-33 143.7 102 70.6
Zm00001eb002320 Zea mays HOM05D005547 ORTHO05D006887 1.0e-32 143.3 100 71.0
Peaxi162Scf00025g00059 Petunia axillaris HOM05D005547 ORTHO05D006887 1.8e-32 142.5 76 85.5
FAN07G0567 Fragaria x ananassa HOM05D005547 ORTHO05D006887 2.3e-32 142.1 101 68.3
FAN17G0411 Fragaria x ananassa HOM05D005547 ORTHO05D006887 2.3e-32 142.1 101 68.3
AL5G11260 Arabidopsis lyrata HOM05D005547 ORTHO05D006887 3.0e-32 141.7 103 68.9
FvH4_4g35970 Fragaria vesca HOM05D005547 ORTHO05D006887 3.0e-32 141.7 101 68.3
FAN12G1717 Fragaria x ananassa HOM05D005547 ORTHO05D006887 3.0e-32 141.7 101 68.3
FAN22G0273 Fragaria x ananassa HOM05D005547 ORTHO05D006887 6.7e-32 140.6 101 67.3
SalBow2G0745 Salvia bowleyana HOM05D005547 ORTHO05D006887 8.7e-32 140.2 91 72.5
AT2G02050 Arabidopsis thaliana HOM05D005547 ORTHO05D006887 3.3e-31 138.3 103 68.0
MD17G1273300 Malus domestica HOM05D005547 ORTHO05D006887 9.7e-31 136.7 68 91.2
Nitab4.5_0000944g0080 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.3e-30 136.3 73 89.0
BcaB07g30717 Brassica carinata HOM05D005547 ORTHO05D006887 2.2e-30 135.6 84 78.6
BcaB07g30718 Brassica carinata HOM05D005547 ORTHO05D006887 2.2e-30 135.6 84 78.6
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 2.8e-30 135.2 87 77.0
SHI04242 Sapria himalayana HOM05D005547 ORTHO05D006887 2.8e-30 135.2 96 68.8
ECA233G2357 Erigeron canadensis HOM05D005547 ORTHO05D006887 3.1e-29 131.7 92 68.5
arahy.Tifrunner.gnm1.ann1.VES97W Arachis hypogaea HOM05D005547 ORTHO05D006887 9.0e-29 130.2 76 77.6
Cc11_g05010 Coffea canephora HOM05D005547 ORTHO05D006887 1.0e-27 126.7 69 84.1
Haze_10731 Corylus avellana HOM05D005547 ORTHO05D006887 4.3e-23 111.3 87 62.1
Mapoly0058s0109 Marchantia polymorpha HOM05D005547 ORTHO05D006887 2.8e-22 108.6 70 68.6
Pp3c14_25130 Physcomitrium patens HOM05D005547 ORTHO05D006887 6.3e-22 107.5 75 61.3
Pp3c10_11190 Physcomitrium patens HOM05D005547 ORTHO05D006887 4.1e-21 104.8 77 57.1
arahy.Tifrunner.gnm1.ann1.FEK9G3 Arachis hypogaea HOM05D005547 ORTHO05D006887 1.3e-19 99.8 67 64.2
C02p50170 Brassica napus HOM05D005547 ORTHO05D006887 7.2e-18 94.0 68 70.6
BolC2t11096H Brassica oleracea HOM05D005547 ORTHO05D006887 7.2e-18 94.0 68 70.6
BcaC03g17109 Brassica carinata HOM05D005547 ORTHO05D006887 1.0e-16 90.1 80 61.2
CBR_g4786 Chara braunii HOM05D005547 ORTHO05D006887 1.4e-16 89.7 71 54.9
GSVIVG01000609001 Vitis vinifera HOM05D005547 ORTHO05D006887 2.3e-16 89.0 53 73.6
SMO356G0087 Selaginella moellendorffii HOM05D005547 ORTHO05D006887 8.8e-16 87.0 65 56.9
Gorai.002G169600 Gossypium raimondii HOM05D005547 ORTHO05D006887 7.4e-15 84.0 98 51.0
Glyma.14G132200 Glycine max HOM05D005547 ORTHO05D006887 1.7e-14 82.8 95 52.6
MCO06G054 Micromonas commoda HOM05D005547 ORTHO05D006887 2.2e-14 82.4 55 58.2
PRCOL_00006370 Prasinoderma coloniale HOM05D005547 ORTHO05D006887 1.1e-07 60.1 67 43.3


User provided reference genes

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