Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000926 Daucus carota HOM05D011721 ORTHO05D013592 0.0e+00 1176.8 561 100.0
DCAR_031495 Daucus carota HOM05D011721 ORTHO05D013592 3.0e-214 748.8 476 79.0
DCAR_023735 Daucus carota HOM05D011721 ORTHO05D013592 1.5e-213 746.5 477 78.6
DCAR_028487 Daucus carota HOM05D011721 ORTHO05D013592 5.6e-213 744.6 475 78.5
DCAR_028155 Daucus carota HOM05D011721 ORTHO05D013592 1.3e-193 680.2 377 87.8
DCAR_017394 Daucus carota HOM05D011721 ORTHO05D013592 3.3e-181 639.0 377 83.0
DCAR_017844 Daucus carota HOM05D011721 ORTHO05D013592 8.8e-174 614.4 355 86.2
DCAR_031486 Daucus carota HOM05D011721 ORTHO05D013592 5.9e-170 601.7 473 67.0
DCAR_004177 Daucus carota HOM05D011721 ORTHO05D013592 3.0e-158 562.8 316 88.3
DCAR_017273 Daucus carota HOM05D011721 ORTHO05D013592 2.3e-129 466.8 375 61.9
DCAR_021122 Daucus carota HOM05D011721 ORTHO05D013592 5.5e-91 339.3 208 82.7
DCAR_028482 Daucus carota HOM05D011721 ORTHO05D013592 9.1e-46 189.1 113 82.3
DCAR_025269 Daucus carota HOM05D011721 ORTHO05D013592 3.2e-43 180.6 193 53.4
DCAR_021121 Daucus carota HOM05D011721 ORTHO05D013592 1.2e-32 145.6 74 94.6
DCAR_005678 Daucus carota HOM05D002618 ORTHO05D002753 6.0e-21 106.7 109 57.8
DCAR_010969 Daucus carota HOM05D011721 ORTHO05D013592 3.1e-17 94.4 62 72.6
DCAR_008891 Daucus carota HOM05D000124 ORTHO05D013592 1.5e-16 92.0 62 71.0
Hma1.2p1_1112F.1_g258510 Hydrangea macrophylla HOM05D002618 ORTHO05D002753 2.0e-13 81.6 95 51.6
Rhsim01G0261600 Rhododendron simsii HOM05D002618 ORTHO05D002753 7.8e-13 79.7 96 50.0
Hma1.2p1_0273F.1_g109390 Hydrangea macrophylla HOM05D002618 ORTHO05D002753 6.6e-12 76.6 95 47.4
Lj2P1145T15 Lonicera japonica HOM05D002618 ORTHO05D002753 1.5e-11 75.5 83 54.2
Lj2P1146T14 Lonicera japonica HOM05D002618 ORTHO05D002753 1.5e-11 75.5 83 54.2
Actinidia30141 Actinidia chinensis HOM05D004007 ORTHO05D002753 5.6e-11 73.6 110 42.7
CSS0047601 Camellia sinensis var. sinensis HOM05D002618 ORTHO05D002753 5.6e-11 73.6 106 43.4
Dinv34654 Davidia involucrata HOM05D002618 ORTHO05D002753 5.6e-11 73.6 100 50.0
Manes.13G037700 Manihot esculenta HOM05D002618 ORTHO05D002753 2.1e-10 71.6 99 46.5
Oeu035724.1 Olea europaea HOM05D002618 ORTHO05D002753 1.1e-09 69.3 91 49.5
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 1.4e-09 68.9 158 32.3
Potri.002G259400 Populus trichocarpa HOM05D002618 ORTHO05D002753 1.8e-09 68.6 91 46.2
Haze_11425 Corylus avellana HOM05D002618 ORTHO05D002753 2.3e-09 68.2 78 53.8
Solyc04g150170.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.1e-09 67.8 158 32.3
Oeu035718.1 Olea europaea HOM05D002618 ORTHO05D002753 4.0e-09 67.4 90 50.0
Sabra02G0197400 Salix brachista HOM05D002618 ORTHO05D002753 4.0e-09 67.4 88 44.3
CiPaw.01G181000 Carya illinoinensis HOM05D002618 ORTHO05D002753 5.2e-09 67.0 82 46.3
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 5.2e-09 67.0 289 25.3
Migut.M01636 Erythranthe guttata HOM05D000176 ORTHO05D000106 6.8e-09 66.6 161 30.4
Solyc01g081584.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 8.9e-09 66.2 201 29.4
Sopen01g034990 Solanum pennellii HOM05D000176 ORTHO05D000106 8.9e-09 66.2 201 29.4
Sopen03g022250 Solanum pennellii HOM05D000176 ORTHO05D000106 8.9e-09 66.2 201 29.4
Sopen04g029940 Solanum pennellii HOM05D000176 ORTHO05D000106 8.9e-09 66.2 201 29.4
Sopen09g029870 Solanum pennellii HOM05D000176 ORTHO05D000106 8.9e-09 66.2 201 29.4
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 8.9e-09 66.2 201 29.4
Solyc03g005550.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.2e-08 65.9 168 31.0
Solyc10g008267.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.2e-08 65.9 168 31.0
Sopen01g011760 Solanum pennellii HOM05D000176 ORTHO05D000106 1.2e-08 65.9 168 31.0
MSTRG.12876 Avicennia marina HOM05D000176 ORTHO05D000106 1.5e-08 65.5 137 30.7
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 2.0e-08 65.1 194 28.9
ECA247G1944 Erigeron canadensis HOM05D002618 ORTHO05D002753 2.0e-08 65.1 97 47.4
PGSC0003DMG400029935 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.0e-08 65.1 166 31.3
Actinidia37534 Actinidia chinensis HOM05D002618 ORTHO05D002753 2.6e-08 64.7 92 46.7
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.6e-08 64.7 298 26.2
ECA248G1895 Erigeron canadensis HOM05D002618 ORTHO05D002753 2.6e-08 64.7 84 46.4
Prupe.1G044300 Prunus persica HOM05D002618 ORTHO05D002753 2.6e-08 64.7 84 44.0
Oeu055462.1 Olea europaea HOM05D002618 ORTHO05D002753 3.4e-08 64.3 101 45.5
Solyc07g044815.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.4e-08 64.3 197 28.4
MSTRG.13026 Avicennia marina HOM05D000176 ORTHO05D000106 4.4e-08 63.9 161 30.4
ClCG06G001520 Citrullus lanatus HOM05D002618 ORTHO05D002753 4.4e-08 63.9 86 44.2
Lsat_1_v5_gn_5_182541 Lactuca sativa HOM05D002618 ORTHO05D002753 4.4e-08 63.9 79 51.9
Solyc05g024385.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.4e-08 63.9 134 34.3
Haze_24673 Corylus avellana HOM05D002618 ORTHO05D002753 5.8e-08 63.5 106 45.3
Oeu049412.1 Olea europaea HOM05D000176 ORTHO05D000106 5.8e-08 63.5 161 28.6
Actinidia11360 Actinidia chinensis HOM05D002618 ORTHO05D002753 7.5e-08 63.2 50 60.0
MSTRG.24105 Avicennia marina HOM05D000176 ORTHO05D000106 7.5e-08 63.2 134 30.6
Haze_24668 Corylus avellana HOM05D002618 ORTHO05D002753 7.5e-08 63.2 99 44.4
Oeu017988.1 Olea europaea HOM05D000176 ORTHO05D000106 7.5e-08 63.2 161 28.0
QL04p066053 Quercus lobata HOM05D000176 ORTHO05D000106 7.5e-08 63.2 155 34.2
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 7.5e-08 63.2 155 34.2
QL05p078397 Quercus lobata HOM05D000070 ORTHO05D000106 7.5e-08 63.2 155 34.2
QL06p040368 Quercus lobata HOM05D000176 ORTHO05D000106 7.5e-08 63.2 155 34.2
QL12p031843 Quercus lobata HOM05D000176 ORTHO05D000106 7.5e-08 63.2 155 34.2
QL93p0164_0014 Quercus lobata HOM05D000176 ORTHO05D000106 7.5e-08 63.2 155 34.2
SalBow3G2216 Salvia bowleyana HOM05D002618 ORTHO05D002753 7.5e-08 63.2 113 38.9
Oeu049415.1 Olea europaea HOM05D000176 ORTHO05D000106 9.9e-08 62.8 157 28.7
DCAR_030358 Daucus carota HOM05D000176 ORTHO05D000106 1.3e-07 62.4 154 31.2
MSTRG.4152 Avicennia marina HOM05D002618 ORTHO05D002753 1.7e-07 62.0 82 46.3
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.7e-07 62.0 177 28.8
CiPaw.02G108800 Carya illinoinensis HOM05D002618 ORTHO05D002753 2.2e-07 61.6 79 48.1
Dinv27082 Davidia involucrata HOM05D002618 ORTHO05D002753 2.2e-07 61.6 62 48.4
Lalb_Chr01g0019781 Lupinus albus HOM05D000176 ORTHO05D000106 2.2e-07 61.6 117 35.9
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 2.2e-07 61.6 158 35.4
QL93p2017_0003 Quercus lobata HOM05D000176 ORTHO05D000106 2.2e-07 61.6 158 35.4
Sopen12g022270 Solanum pennellii HOM05D000006 ORTHO05D000001 2.2e-07 61.6 249 26.1
TAR365G0501 Trochodendron aralioides HOM05D002618 ORTHO05D002753 2.2e-07 61.6 87 41.4
RhsimUnG0046100 Rhododendron simsii HOM05D000176 ORTHO05D000106 2.9e-07 61.2 256 23.0
Cfa002461 Carpinus fangiana HOM05D002618 ORTHO05D002753 3.7e-07 60.8 129 40.3
Sopen12g002060 Solanum pennellii HOM05D000176 ORTHO05D003511 3.7e-07 60.8 143 30.1
PGSC0003DMG400034839 Solanum tuberosum HOM05D000176 ORTHO05D000106 3.7e-07 60.8 168 29.8
QL05p088783 Quercus lobata HOM05D000176 ORTHO05D000106 4.9e-07 60.5 254 25.2
Rhsim02G0042100 Rhododendron simsii HOM05D002618 ORTHO05D002753 4.9e-07 60.5 87 48.3
TAR633G1023 Trochodendron aralioides HOM05D002618 ORTHO05D002753 4.9e-07 60.5 70 47.1
arahy.Tifrunner.gnm1.ann1.B6LYB4 Arachis hypogaea HOM05D000176 ORTHO05D000106 6.4e-07 60.1 253 24.9
QL04p053141 Quercus lobata HOM05D000176 ORTHO05D000106 6.4e-07 60.1 155 33.5
QL12p023375 Quercus lobata HOM05D000176 ORTHO05D000106 6.4e-07 60.1 155 33.5
THA.LOC104826047 Tarenaya hassleriana HOM05D002618 ORTHO05D002753 6.4e-07 60.1 108 36.1
Lalb_Chr01g0015401 Lupinus albus HOM05D000176 ORTHO05D000106 8.3e-07 59.7 135 34.1
TWI12G1148 Tripterygium wilfordii HOM05D002618 ORTHO05D002753 8.3e-07 59.7 105 41.9
arahy.Tifrunner.gnm1.ann1.UGFV7M Arachis hypogaea HOM05D000176 ORTHO05D000106 1.1e-06 59.3 181 26.5
Ciclev10022665m.g Citrus clementina HOM05D002618 ORTHO05D002753 1.1e-06 59.3 94 42.6
QL93p0869_0056 Quercus lobata HOM05D000176 ORTHO05D000106 1.1e-06 59.3 155 33.5
arahy.Tifrunner.gnm1.ann1.M3TN6X Arachis hypogaea HOM05D000176 ORTHO05D000106 1.4e-06 58.9 167 26.9
Cpa.g.sc165.38 Carica papaya HOM05D002618 ORTHO05D002753 1.4e-06 58.9 82 45.1
CDE11G0651 Ceratophyllum demersum HOM05D000145 ORTHO05D001435 1.4e-06 58.9 48 52.1
COL.COLO4_20570 Corchorus olitorius HOM05D002618 ORTHO05D002753 1.4e-06 58.9 103 38.8
Gohir.A08G191600 Gossypium hirsutum HOM05D002618 ORTHO05D002753 1.4e-06 58.9 99 38.4
Gorai.004G221900 Gossypium raimondii HOM05D002618 ORTHO05D002753 1.4e-06 58.9 99 38.4
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-06 58.9 163 30.7
QL09p008289 Quercus lobata HOM05D001043 ORTHO05D000106 1.4e-06 58.9 158 34.8
QL10p063859 Quercus lobata HOM05D000176 ORTHO05D000106 1.4e-06 58.9 254 24.8
THA.LOC104801139 Tarenaya hassleriana HOM05D002618 ORTHO05D002753 1.4e-06 58.9 92 40.2
CSS0032980 Camellia sinensis var. sinensis HOM05D002618 ORTHO05D002753 1.9e-06 58.5 40 70.0
HanXRQChr05g0160751 Helianthus annuus HOM05D002618 ORTHO05D002753 1.9e-06 58.5 91 39.6
Manes.12G034900 Manihot esculenta HOM05D002618 ORTHO05D002753 1.9e-06 58.5 94 41.5
QL01p018788 Quercus lobata HOM05D000176 ORTHO05D000106 1.9e-06 58.5 182 26.9
Solyc12g006100.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.9e-06 58.5 295 25.8
CSS0021846 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 58.2 173 30.6
CSS0044124 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.4e-06 58.2 173 30.6
PGSC0003DMG400010948 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.4e-06 58.2 134 32.1
TWI75G0073 Tripterygium wilfordii HOM05D002618 ORTHO05D002753 2.4e-06 58.2 104 41.3
CSS0007867 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.2e-06 57.8 169 30.2
Ca_07377_v3 Cicer arietinum L. HOM05D000176 ORTHO05D012663 3.2e-06 57.8 146 30.8
Gohir.D08G209500 Gossypium hirsutum HOM05D002618 ORTHO05D002753 3.2e-06 57.8 99 38.4
Rhsim03G0028500 Rhododendron simsii HOM05D000176 ORTHO05D000106 3.2e-06 57.8 137 29.9
GSVIVG01027861001 Vitis vinifera HOM05D002618 ORTHO05D002753 3.2e-06 57.8 45 62.2
Aqoxy5G00180 Aquilegia oxysepala HOM05D002618 ORTHO05D002753 4.1e-06 57.4 64 51.6
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 57.4 169 30.2
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 57.4 169 30.2
CSS0036437 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-06 57.4 168 28.6
CANSAT56G2256 Cannabis sativa HOM05D002618 ORTHO05D002753 4.1e-06 57.4 84 45.2
CiPaw.04G188700 Carya illinoinensis HOM05D002618 ORTHO05D002753 4.1e-06 57.4 98 40.8
Duzib133G0289 Durio zibethinus HOM05D002618 ORTHO05D002753 4.1e-06 57.4 112 39.3
Gohir.D11G138300 Gossypium hirsutum HOM05D002618 ORTHO05D002753 4.1e-06 57.4 105 37.1
Gorai.007G148300 Gossypium raimondii HOM05D002618 ORTHO05D002753 4.1e-06 57.4 105 37.1
Phvul.007G190700 Phaseolus vulgaris HOM05D002618 ORTHO05D002753 4.1e-06 57.4 90 44.4
Atru.chr5.1780 Acer truncatum HOM05D002618 ORTHO05D002753 5.4e-06 57.0 95 44.2
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.4e-06 57.0 167 28.7
Migut.N00288 Erythranthe guttata HOM05D002618 ORTHO05D002753 5.4e-06 57.0 94 42.6
Manes.12G034600 Manihot esculenta HOM05D002618 ORTHO05D002753 5.4e-06 57.0 104 36.5
QL03p015444 Quercus lobata HOM05D000176 ORTHO05D000106 5.4e-06 57.0 134 37.3
Sed0015346 Sechium edule HOM05D000176 ORTHO05D000106 5.4e-06 57.0 215 25.6
Actinidia39915 Actinidia chinensis HOM05D002618 ORTHO05D002753 7.1e-06 56.6 60 50.0
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 7.1e-06 56.6 167 29.3
Sabra10G0038200 Salix brachista HOM05D002618 ORTHO05D002753 7.1e-06 56.6 81 45.7
arahy.Tifrunner.gnm1.ann1.N6NQQH Arachis hypogaea HOM05D000176 ORTHO05D000106 9.2e-06 56.2 134 34.3
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.2e-06 56.2 167 28.7
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.2e-06 56.2 167 28.7
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.2e-06 56.2 167 28.7
MELO3C033541.2 Cucumis melo HOM05D000176 ORTHO05D000106 9.2e-06 56.2 287 22.3
Gorai.005G051600 Gossypium raimondii HOM05D002618 ORTHO05D002753 9.2e-06 56.2 92 44.6
QL05p044352 Quercus lobata HOM05D000176 ORTHO05D000106 9.2e-06 56.2 177 28.2
Rhsim01G0238100 Rhododendron simsii HOM05D000176 ORTHO05D000106 9.2e-06 56.2 135 30.4
Sopen01g009560 Solanum pennellii HOM05D000176 ORTHO05D000695 9.2e-06 56.2 170 28.8
Thecc.04G259700 Theobroma cacao HOM05D002618 ORTHO05D002753 9.2e-06 56.2 84 46.4
TWI79G1140 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 9.2e-06 56.2 187 28.3
vmacro15462 Vaccinium macrocarpon HOM05D002618 ORTHO05D002753 9.2e-06 56.2 97 40.2


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