Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 5.5e-61 237.7 137 100.0
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.8e-32 142.9 103 83.5
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 3.5e-31 138.7 103 84.5
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.0e-30 137.1 103 78.6
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.0e-30 137.1 109 74.3
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 1.0e-30 137.1 101 77.2
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.3e-30 136.7 108 74.1
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.7e-30 136.3 109 75.2
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.7e-30 136.3 109 75.2
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.7e-30 136.3 113 76.1
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 2.2e-30 136.0 104 81.7
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 2.2e-30 136.0 107 81.3
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 2.2e-30 136.0 128 68.8
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.2e-30 136.0 128 68.8
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.2e-30 136.0 102 83.3
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 5.0e-30 134.8 107 57.0
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 5.0e-30 134.8 103 80.6
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 5.0e-30 134.8 103 80.6
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 5.0e-30 134.8 102 80.4
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 6.5e-30 134.4 103 82.5
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 8.5e-30 134.0 99 80.8
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 8.5e-30 134.0 105 83.8
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.4e-29 133.3 115 73.9
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.9e-29 132.9 128 67.2
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 2.5e-29 132.5 103 78.6
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.5e-29 132.5 99 77.8
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 2.5e-29 132.5 102 80.4
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 3.2e-29 132.1 99 83.8
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 3.2e-29 132.1 103 78.6
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 4.2e-29 131.7 108 77.8
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 4.2e-29 131.7 103 82.5
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 7.2e-29 131.0 103 80.6
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 7.2e-29 131.0 103 79.6
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.2e-28 130.2 106 76.4
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.2e-28 130.2 100 84.0
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.6e-28 129.8 105 78.1
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.6e-28 129.8 113 74.3
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 1.6e-28 129.8 100 82.0
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 1.6e-28 129.8 95 85.3
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 2.1e-28 129.4 99 78.8
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 2.1e-28 129.4 105 77.1
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 2.7e-28 129.0 100 82.0
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 2.7e-28 129.0 122 69.7
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 2.7e-28 129.0 100 82.0
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 2.7e-28 129.0 138 63.8
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 2.7e-28 129.0 103 79.6
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 3.6e-28 128.6 103 73.8
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 3.6e-28 128.6 103 77.7
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 4.7e-28 128.3 107 74.8
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 6.1e-28 127.9 134 61.2
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 6.1e-28 127.9 129 62.0
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 6.1e-28 127.9 99 79.8
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 8.0e-28 127.5 99 80.8
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 8.0e-28 127.5 100 81.0
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 8.0e-28 127.5 100 81.0
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 1.0e-27 127.1 97 82.5
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.0e-27 127.1 105 76.2
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 1.0e-27 127.1 101 75.2
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.0e-27 127.1 101 75.2
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 1.4e-27 126.7 104 75.0
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 1.4e-27 126.7 100 79.0
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 1.4e-27 126.7 103 72.8
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.8e-27 126.3 103 72.8
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.8e-27 126.3 115 73.9
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 1.8e-27 126.3 102 79.4
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 2.3e-27 125.9 105 76.2
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 2.3e-27 125.9 103 79.6
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 3.0e-27 125.6 97 78.4
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 3.0e-27 125.6 99 78.8
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 3.9e-27 125.2 101 77.2
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 3.9e-27 125.2 97 78.4
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 3.9e-27 125.2 98 78.6
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 5.2e-27 124.8 105 73.3
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 5.2e-27 124.8 102 79.4
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 5.2e-27 124.8 114 71.1
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 6.7e-27 124.4 97 79.4
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 6.7e-27 124.4 97 76.3
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 6.7e-27 124.4 110 76.4
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 8.8e-27 124.0 102 74.5
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 8.8e-27 124.0 105 75.2
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 1.1e-26 123.6 100 78.0
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.6e-26 122.5 100 78.0
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 3.3e-26 122.1 98 82.7
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 4.4e-26 121.7 128 66.4
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 5.7e-26 121.3 124 64.5
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 7.4e-26 120.9 113 69.9
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 9.7e-26 120.6 97 75.3
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.7e-25 119.8 100 76.0
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 2.2e-25 119.4 101 73.3
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 6.3e-25 117.9 103 67.0
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 6.3e-25 117.9 99 71.7
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.4e-24 116.7 138 60.9
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 5.3e-24 114.8 69 72.5
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 9.1e-24 114.0 80 86.2
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 3.5e-23 112.1 90 83.3
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 3.5e-23 112.1 97 75.3
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 5.0e-22 108.2 110 66.4
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 5.0e-22 108.2 67 71.6
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 2.5e-21 105.9 93 73.1
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 3.2e-21 105.5 75 85.3
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.4e-19 100.1 75 77.3
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 5.2e-19 98.2 75 80.0
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 5.2e-19 98.2 120 56.7
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 2.2e-17 92.8 80 70.0


User provided reference genes

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