Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 9.5e-42 172.9 79 100.0
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 9.5e-42 172.9 79 100.0
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.9e-29 132.1 71 80.3
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 3.2e-29 131.3 71 78.9
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.7e-28 128.3 71 87.3
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.7e-27 125.6 67 76.1
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.3e-27 125.2 67 79.1
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 8.7e-27 123.2 67 77.6
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 8.7e-27 123.2 69 72.5
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 8.7e-27 123.2 69 73.9
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 8.7e-27 123.2 67 74.6
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 1.1e-26 122.9 69 73.9
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.5e-26 122.5 66 75.8
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 1.5e-26 122.5 67 74.6
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 1.5e-26 122.5 67 76.1
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 2.5e-26 121.7 69 72.5
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 2.5e-26 121.7 71 69.0
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 2.5e-26 121.7 71 69.0
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 3.3e-26 121.3 66 74.2
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 3.3e-26 121.3 71 71.8
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 4.3e-26 120.9 71 67.6
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 4.3e-26 120.9 73 68.5
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 4.3e-26 120.9 67 73.1
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 4.3e-26 120.9 71 73.2
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 5.6e-26 120.6 71 70.4
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 5.6e-26 120.6 67 73.1
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 5.6e-26 120.6 67 73.1
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 5.6e-26 120.6 67 73.1
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 7.3e-26 120.2 69 72.5
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.3e-26 120.2 71 70.4
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 9.6e-26 119.8 67 73.1
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 9.6e-26 119.8 69 72.5
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 9.6e-26 119.8 66 75.8
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 9.6e-26 119.8 69 71.0
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 9.6e-26 119.8 70 72.9
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 1.2e-25 119.4 67 74.6
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.2e-25 119.4 69 73.9
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 2.1e-25 118.6 67 73.1
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 2.1e-25 118.6 67 73.1
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 2.8e-25 118.2 67 71.6
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 3.6e-25 117.9 67 73.1
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 4.7e-25 117.5 67 71.6
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 4.7e-25 117.5 66 71.2
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 4.7e-25 117.5 66 71.2
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 4.7e-25 117.5 65 70.8
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 4.7e-25 117.5 71 70.4
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 4.7e-25 117.5 67 71.6
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 6.2e-25 117.1 70 68.6
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 8.1e-25 116.7 63 74.6
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 1.1e-24 116.3 65 72.3
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 1.4e-24 115.9 67 67.2
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 3.1e-24 114.8 71 67.6
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 3.1e-24 114.8 66 69.7
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 3.1e-24 114.8 65 70.8
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 5.2e-24 114.0 71 63.4
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 5.2e-24 114.0 69 66.7
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 6.9e-24 113.6 67 67.2
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 6.9e-24 113.6 66 68.2
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 9.0e-24 113.2 69 66.7
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 1.2e-23 112.8 65 72.3
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.5e-23 112.5 62 75.8
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 2.0e-23 112.1 65 70.8
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.6e-23 111.7 67 61.2
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 2.6e-23 111.7 65 66.2
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.4e-23 110.9 65 70.8
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 4.4e-23 110.9 62 74.2
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 5.8e-23 110.5 65 69.2
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 5.8e-23 110.5 62 72.6
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 7.6e-23 110.2 65 67.7
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 7.6e-23 110.2 65 67.7
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 7.6e-23 110.2 65 67.7
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 7.6e-23 110.2 67 61.2
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 7.6e-23 110.2 65 67.7
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 7.6e-23 110.2 65 67.7
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 9.9e-23 109.8 64 65.6
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 9.9e-23 109.8 62 69.4
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 9.9e-23 109.8 66 68.2
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 9.9e-23 109.8 65 67.7
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 9.9e-23 109.8 65 69.2
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 1.3e-22 109.4 65 67.7
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 1.3e-22 109.4 65 67.7
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 1.3e-22 109.4 65 67.7
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 1.3e-22 109.4 65 67.7
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 1.3e-22 109.4 65 67.7
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.3e-22 109.4 64 67.2
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.3e-22 109.4 68 67.6
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 2.2e-22 108.6 60 71.7
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.2e-22 108.6 62 71.0
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 3.8e-22 107.8 59 72.9
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 3.8e-22 107.8 59 72.9
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 3.8e-22 107.8 59 72.9
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 4.9e-22 107.5 65 67.7
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 6.4e-22 107.1 62 69.4
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 6.4e-22 107.1 62 69.4
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 8.4e-22 106.7 63 63.5
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.4e-21 105.9 65 67.7
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.4e-21 105.9 65 67.7
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 1.9e-21 105.5 65 66.2
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.4e-21 104.0 67 58.2
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.4e-21 104.0 67 58.2
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 9.3e-21 103.2 59 72.9
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 9.3e-21 103.2 65 61.5
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.2e-20 102.8 67 58.2
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.7e-20 101.7 65 64.6
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.5e-20 101.3 67 58.2
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 6.0e-20 100.5 66 65.2
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 7.8e-20 100.1 60 65.0
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-19 99.4 67 55.2
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.9e-19 97.8 65 58.5
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 5.1e-19 97.4 65 56.9
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 5.1e-19 97.4 65 56.9
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 5.1e-19 97.4 65 56.9
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.7e-19 96.7 65 56.9
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 8.7e-19 96.7 62 61.3
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 4.3e-18 94.4 62 58.1
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 5.6e-18 94.0 67 52.2
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.4e-16 89.4 56 62.5
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.4e-16 88.6 49 71.4
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 5.3e-16 87.4 67 61.2
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.6e-15 83.6 48 68.8
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 7.1e-13 77.0 51 64.7
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 4.5e-07 57.8 58 39.7
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 4.9e-06 54.3 58 37.9
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 8.4e-06 53.5 61 34.4


User provided reference genes

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