Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g445900 Chlamydomonas reinhardtii HOM05D002153 ORTHO05D002137 0.0e+00 1770.7 1117 100.0
VMungo0540G0227 Vigna mungo HOM05D002153 ORTHO05D002137 9.4e-10 70.5 241 28.6
MELO3C021254.2 Cucumis melo HOM05D002153 ORTHO05D002137 1.6e-09 69.7 230 29.1
C07p40000 Brassica napus HOM05D002153 ORTHO05D002137 6.1e-09 67.8 236 27.1
ClCG06G004400 Citrullus lanatus HOM05D002153 ORTHO05D002137 6.1e-09 67.8 230 28.7
Mapoly0071s0022 Marchantia polymorpha HOM05D002153 ORTHO05D002137 6.1e-09 67.8 266 27.4
BraA06t26738Z Brassica rapa HOM05D002153 ORTHO05D002137 8.0e-09 67.4 236 27.1
CiPaw.02G072500 Carya illinoinensis HOM05D002153 ORTHO05D002137 8.0e-09 67.4 239 27.2
A06p38230 Brassica napus HOM05D002153 ORTHO05D002137 1.0e-08 67.0 236 27.1
MBI18_g27381_MAGBIO Magnolia biondii HOM05D002153 ORTHO05D002137 1.0e-08 67.0 392 26.8
QL03p023659 Quercus lobata HOM05D002153 ORTHO05D002137 1.4e-08 66.6 240 28.3
BcaNung05956 Brassica carinata HOM05D002153 ORTHO05D002137 1.8e-08 66.2 236 27.1
PSO724G0612 Papaver somniferum HOM05D002153 ORTHO05D002137 1.8e-08 66.2 222 27.0
Peaxi162Scf00228g00736 Petunia axillaris HOM05D002153 ORTHO05D002137 2.3e-08 65.9 201 28.9
Sed0005370 Sechium edule HOM05D002153 ORTHO05D002137 2.3e-08 65.9 219 28.3
BolC7t44533H Brassica oleracea HOM05D002153 ORTHO05D002137 3.0e-08 65.5 236 27.1
Duzib151G1027 Durio zibethinus HOM05D002153 ORTHO05D002137 3.0e-08 65.5 222 28.8
FvH4_4g20670 Fragaria vesca HOM05D002153 ORTHO05D002137 3.0e-08 65.5 240 26.7
Nitab4.5_0003420g0020 Nicotiana tabacum HOM05D002153 ORTHO05D002137 3.0e-08 65.5 207 26.6
Nn3g21802 Nelumbo nucifera HOM05D002153 ORTHO05D002137 4.0e-08 65.1 220 27.7
CDE02G2661 Ceratophyllum demersum HOM05D002153 ORTHO05D002137 5.2e-08 64.7 286 25.9
COL.COLO4_34568 Corchorus olitorius HOM05D002153 ORTHO05D002137 5.2e-08 64.7 221 28.5
Thhalv10003750m.g Eutrema salsugineum HOM05D002153 ORTHO05D002137 5.2e-08 64.7 233 26.6
AUR62041932 Chenopodium quinoa HOM05D002153 ORTHO05D002137 6.7e-08 64.3 214 24.8
Aqoxy5G02710 Aquilegia oxysepala HOM05D002153 ORTHO05D002137 8.8e-08 63.9 202 27.7
Oeu052015.1 Olea europaea HOM05D002153 ORTHO05D002137 8.8e-08 63.9 213 25.4
Pp3c24_9110 Physcomitrium patens HOM05D002153 ORTHO05D002137 8.8e-08 63.9 389 25.7
Sc13g0007070 Simmondsia chinensis HOM05D002153 ORTHO05D002137 8.8e-08 63.9 238 26.9
vmacro07964 Vaccinium macrocarpon HOM05D002153 ORTHO05D002137 8.8e-08 63.9 242 27.7
Dinv15136 Davidia involucrata HOM05D002153 ORTHO05D002137 1.2e-07 63.5 207 28.0
Nitab4.5_0002264g0010 Nicotiana tabacum HOM05D002153 ORTHO05D002137 1.2e-07 63.5 207 26.1
TWI73G1003 Tripterygium wilfordii HOM05D002153 ORTHO05D002137 1.2e-07 63.5 206 27.2
HPP92_013512 Vanilla planifolia HOM05D002153 ORTHO05D002137 2.0e-07 62.8 265 26.8
Atru.BG.95.p Acer truncatum HOM05D002153 ORTHO05D002137 2.6e-07 62.4 241 27.4
ECA240G4837 Erigeron canadensis HOM05D002153 ORTHO05D002137 2.6e-07 62.4 219 26.5
HanXRQChr03g0076661 Helianthus annuus HOM05D002153 ORTHO05D002137 2.6e-07 62.4 219 26.9
CSS0018880 Camellia sinensis var. sinensis HOM05D002153 ORTHO05D002137 3.3e-07 62.0 206 27.2
ATR0165G035 Amborella trichopoda HOM05D002153 ORTHO05D002137 4.4e-07 61.6 229 25.8
MSTRG.7050 Avicennia marina HOM05D002153 ORTHO05D002137 4.4e-07 61.6 211 23.7
BcaC06g30719 Brassica carinata HOM05D002153 ORTHO05D002137 4.4e-07 61.6 223 26.5
BolC6t40309H Brassica oleracea HOM05D002153 ORTHO05D002137 4.4e-07 61.6 228 25.0
Ciclev10004408m.g Citrus clementina HOM05D002153 ORTHO05D002137 4.4e-07 61.6 222 26.6
Hma1.2p1_1400F.1_g280980 Hydrangea macrophylla HOM05D002153 ORTHO05D002137 4.4e-07 61.6 220 26.4
Oeu045760.1 Olea europaea HOM05D002153 ORTHO05D002137 4.4e-07 61.6 241 25.7
Actinidia31568 Actinidia chinensis HOM05D002153 ORTHO05D002137 5.7e-07 61.2 207 26.1
CiPaw.01G134500 Carya illinoinensis HOM05D002153 ORTHO05D002137 5.7e-07 61.2 238 26.9
DCAR_019934 Daucus carota HOM05D002153 ORTHO05D002137 5.7e-07 61.2 220 25.5
Sp2g19900 Schrenkiella parvula HOM05D002153 ORTHO05D002137 5.7e-07 61.2 224 26.3
AL8G23400 Arabidopsis lyrata HOM05D002153 ORTHO05D002137 7.5e-07 60.8 222 26.6
A07p44180 Brassica napus HOM05D002153 ORTHO05D002137 7.5e-07 60.8 225 24.9
BraA07t31926Z Brassica rapa HOM05D002153 ORTHO05D002137 7.5e-07 60.8 225 24.9
Thecc.04G306000 Theobroma cacao HOM05D002153 ORTHO05D002137 7.5e-07 60.8 220 27.3
ATR0693G275 Amborella trichopoda HOM05D002153 ORTHO05D002137 9.7e-07 60.5 463 25.1
BcaC08g47467 Brassica carinata HOM05D002153 ORTHO05D002137 9.7e-07 60.5 225 24.9
C06p52910 Brassica napus HOM05D002153 ORTHO05D002137 9.7e-07 60.5 225 24.9
Potri.010G148900 Populus trichocarpa HOM05D002153 ORTHO05D002137 9.7e-07 60.5 206 26.7
AT5G49580 Arabidopsis thaliana HOM05D002153 ORTHO05D002137 1.3e-06 60.1 222 27.0
arahy.Tifrunner.gnm1.ann1.L9KMYJ Arachis hypogaea HOM05D002153 ORTHO05D002137 1.3e-06 60.1 228 25.4
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 1.3e-06 60.1 206 25.7
Lalb_Chr18g0058541 Lupinus albus HOM05D002153 ORTHO05D002137 1.3e-06 60.1 222 26.6
TAR627G0124 Trochodendron aralioides HOM05D002153 ORTHO05D002137 1.3e-06 60.1 213 25.8
GSVIVG01034951001 Vitis vinifera HOM05D002153 ORTHO05D002137 1.3e-06 60.1 420 23.8
BcaB02g07193 Brassica carinata HOM05D002153 ORTHO05D002137 1.7e-06 59.7 217 25.3
Gohir.D13G158100 Gossypium hirsutum HOM05D002153 ORTHO05D002137 1.7e-06 59.7 237 23.2
Lj6g0011183 Lotus japonicus HOM05D002153 ORTHO05D002137 1.7e-06 59.7 326 23.9
Oeu022729.1 Olea europaea HOM05D002153 ORTHO05D002137 2.2e-06 59.3 278 26.3
Hund03141 Selenicereus undatus HOM05D002153 ORTHO05D002137 2.2e-06 59.3 239 25.5
arahy.Tifrunner.gnm1.ann1.IQG6ND Arachis hypogaea HOM05D002153 ORTHO05D002137 2.8e-06 58.9 228 25.0
CARHR288030 Cardamine hirsuta HOM05D002153 ORTHO05D002137 2.8e-06 58.9 224 25.9
Duzib212G0181 Durio zibethinus HOM05D002153 ORTHO05D002137 2.8e-06 58.9 175 28.0
Phvul.006G120300 Phaseolus vulgaris HOM05D002153 ORTHO05D002137 2.8e-06 58.9 287 25.8
Solyc07g026810.3 Solanum lycopersicum HOM05D002153 ORTHO05D002137 2.8e-06 58.9 208 26.9
HanXRQChr09g0250461 Helianthus annuus HOM05D002153 ORTHO05D002137 3.7e-06 58.5 311 24.8
MD16G1149100 Malus domestica HOM05D002153 ORTHO05D002137 3.7e-06 58.5 221 25.8
Manes.03G207800 Manihot esculenta HOM05D002153 ORTHO05D002137 3.7e-06 58.5 300 25.0
PSO729G0267 Papaver somniferum HOM05D002153 ORTHO05D002137 3.7e-06 58.5 308 24.7
Atru.chr2.1846 Acer truncatum HOM05D002153 ORTHO05D002137 4.8e-06 58.2 227 25.1
CSS0033074 Camellia sinensis var. sinensis HOM05D002153 ORTHO05D002137 4.8e-06 58.2 207 25.6
Gohir.D10G181200 Gossypium hirsutum HOM05D002153 ORTHO05D002137 4.8e-06 58.2 280 26.1
BcaB02g08661 Brassica carinata HOM05D002153 ORTHO05D002137 6.3e-06 57.8 225 24.4
Eucgr.B03981 Eucalyptus grandis HOM05D002153 ORTHO05D002137 6.3e-06 57.8 240 25.8
Gohir.A10G174700 Gossypium hirsutum HOM05D002153 ORTHO05D002137 6.3e-06 57.8 280 26.1
Potri.001G438300 Populus trichocarpa HOM05D002153 ORTHO05D002137 6.3e-06 57.8 214 23.8
Carub.0008s0945 Capsella rubella HOM05D002153 ORTHO05D002137 8.2e-06 57.4 223 24.2
CBR_g8288 Chara braunii HOM05D002153 ORTHO05D002137 8.2e-06 57.4 269 25.3
Gorai.011G202700 Gossypium raimondii HOM05D002153 ORTHO05D002137 8.2e-06 57.4 280 26.1
THA.LOC104802691 Tarenaya hassleriana HOM05D001406 ORTHO05D002467 8.2e-06 57.4 92 41.3


User provided reference genes

Program Settings