Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre08.g380452 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 4.6e-300 1033.9 555 100.0
Cre01.g041800 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 1.5e-210 736.5 469 77.8
Cre02.g095117 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 2.7e-175 619.4 480 66.9
Cre12.g541211 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 3.9e-41 173.7 473 33.6
Cre12.g555100 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 1.1e-40 172.2 422 33.6
Cre09.g392766 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 1.5e-40 171.8 459 32.2
Cre05.g233400 Chlamydomonas reinhardtii HOM05D020067 ORTHO05D010759 3.7e-39 167.2 519 31.0
Cre06.g306050 Chlamydomonas reinhardtii HOM05D020067 ORTHO05D010759 2.4e-38 164.5 511 30.5
Cre02.g096500 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 3.1e-38 164.1 368 35.1
Cre06.g303100 Chlamydomonas reinhardtii HOM05D020067 ORTHO05D010759 5.3e-38 163.3 502 30.3
Cre11.g467607 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 1.5e-37 161.8 542 29.3
Cre10.g465000 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 5.0e-36 156.8 471 30.8
Cre16.g691350 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 2.7e-34 151.0 469 30.7
Cre04.g217700 Chlamydomonas reinhardtii HOM05D020067 ORTHO05D010759 1.8e-33 148.3 513 29.2
Cre02.g119500 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 2.0e-32 144.8 520 28.7
Cre10.g455000 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 3.3e-32 144.1 459 30.5
Cre12.g514100 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 9.7e-32 142.5 503 31.2
Cre07.g316200 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 1.3e-31 142.1 480 29.2
Cre12.g512050 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 4.8e-31 140.2 410 28.5
Cre05.g244550 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 6.3e-31 139.8 490 29.6
Cre13.g602800 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 8.2e-31 139.4 374 33.7
Cre12.g517750 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 5.3e-30 136.7 410 28.0
Cre16.g674150 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 1.0e-28 132.5 621 31.1
Cre07.g352250 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 3.9e-25 120.6 425 28.0
Pp3s76_130 Physcomitrium patens HOM05D023212 ORTHO05D010759 4.4e-24 117.1 412 28.4
Pp3c5_100 Physcomitrium patens HOM05D023212 ORTHO05D010759 4.8e-23 113.6 354 28.8
Pp3c5_103 Physcomitrium patens HOM05D023212 ORTHO05D010759 4.8e-23 113.6 354 28.8
Pp3c20_23730 Physcomitrium patens HOM05D023212 ORTHO05D010759 5.0e-20 103.6 410 26.8
SMO118G0013 Selaginella moellendorffii HOM05D013444 ORTHO05D010759 6.5e-20 103.2 455 27.3
SMO146G0329 Selaginella moellendorffii HOM05D023212 ORTHO05D010759 2.7e-18 97.8 318 27.4
Cre17.g701809 Chlamydomonas reinhardtii HOM05D020067 ORTHO05D010759 3.6e-18 97.4 254 30.7
AagrBONN_evm.TU.Sc2ySwM_369.394 Anthoceros agrestis HOM05D013444 ORTHO05D010759 1.0e-17 95.9 312 25.6
SMO361G0384 Selaginella moellendorffii HOM05D013444 ORTHO05D010759 2.0e-16 91.7 482 25.9
SMO361G0258 Selaginella moellendorffii HOM05D026941 ORTHO05D010759 8.2e-15 86.3 334 26.9
SMO087G0004 Selaginella moellendorffii HOM05D013444 ORTHO05D010759 1.1e-14 85.9 339 28.0
SMO361G0753 Selaginella moellendorffii HOM05D026941 ORTHO05D010759 1.1e-14 85.9 334 26.9
SMO239G0038 Selaginella moellendorffii HOM05D013444 ORTHO05D010759 9.1e-14 82.8 308 26.0
SMO361G0480 Selaginella moellendorffii HOM05D013444 ORTHO05D010759 1.2e-13 82.4 299 28.1
SMO351G0100 Selaginella moellendorffii HOM05D013444 ORTHO05D010759 3.8e-12 77.4 144 38.2
SMO199G0103 Selaginella moellendorffii HOM05D013444 ORTHO05D010759 1.1e-11 75.9 318 26.1
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 3.2e-11 74.3 300 24.0
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 4.2e-11 73.9 300 24.0
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 7.2e-11 73.2 300 24.0
SMO351G0636 Selaginella moellendorffii HOM05D013444 ORTHO05D010759 1.6e-10 72.0 357 24.6
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 1.6e-10 72.0 335 24.5
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 2.1e-10 71.6 302 25.8
ATR0661G117 Amborella trichopoda HOM05D005963 ORTHO05D006869 3.6e-10 70.9 331 23.3
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 6.1e-10 70.1 484 22.1
SMO276G0013 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 2.3e-09 68.2 325 25.2
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 6.8e-09 66.6 367 22.3
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 6.8e-09 66.6 165 29.7
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 1.2e-08 65.9 298 23.2
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 2.0e-08 65.1 305 23.3
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 3.4e-08 64.3 306 24.2
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 3.4e-08 64.3 292 23.6
SMO361G0674 Selaginella moellendorffii HOM05D013444 ORTHO05D010759 3.4e-08 64.3 148 35.1
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 7.5e-08 63.2 295 23.7
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 7.5e-08 63.2 301 21.3
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 7.5e-08 63.2 301 21.6
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 7.5e-08 63.2 297 21.9
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 9.7e-08 62.8 285 23.5
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 1.3e-07 62.4 311 22.2
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.2e-07 61.6 320 23.4
Cre07.g352150 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 2.8e-07 61.2 181 30.9
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 3.7e-07 60.8 307 22.1
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 4.8e-07 60.5 312 22.1
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 4.8e-07 60.5 302 24.2
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 6.3e-07 60.1 341 22.6
PGSC0003DMG400007557 Solanum tuberosum HOM05D005963 ORTHO05D006869 6.3e-07 60.1 310 21.9
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 6.3e-07 60.1 296 22.3
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 8.3e-07 59.7 292 24.0
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 8.3e-07 59.7 343 21.3
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 8.3e-07 59.7 345 23.5
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 1.4e-06 58.9 475 22.7
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 1.4e-06 58.9 296 23.0
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 1.4e-06 58.9 309 23.0
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 1.4e-06 58.9 309 23.0
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 1.8e-06 58.5 352 22.4
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 1.8e-06 58.5 300 23.7
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 1.8e-06 58.5 296 23.6
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 2.4e-06 58.2 294 23.1
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 2.4e-06 58.2 167 27.5
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 2.4e-06 58.2 295 23.4
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 2.4e-06 58.2 309 23.0
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 3.1e-06 57.8 306 21.6
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 3.1e-06 57.8 300 22.7
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 3.1e-06 57.8 312 22.8
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 4.1e-06 57.4 295 22.7
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 4.1e-06 57.4 308 22.7
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 5.3e-06 57.0 154 25.3
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 7.0e-06 56.6 294 23.5
SMO137G0326 Selaginella moellendorffii HOM05D034812 ORTHO05D037546 7.0e-06 56.6 219 26.9
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 9.1e-06 56.2 357 22.1
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 9.1e-06 56.2 360 23.1
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 9.1e-06 56.2 166 26.5
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 9.1e-06 56.2 295 22.4


User provided reference genes

Program Settings