Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g198950 Chlamydomonas reinhardtii HOM05D006773 ORTHO05D008775 4.3e-147 524.6 263 100.0
Pp3c1_24790 Physcomitrium patens HOM05D006773 ORTHO05D008775 7.3e-54 214.9 222 52.7
Aa31LG4G7120 Aethionema arabicum HOM05D006773 ORTHO05D008775 2.8e-53 213.0 217 51.2
MBI06_g35966_MAGBIO Magnolia biondii HOM05D006773 ORTHO05D008775 3.6e-53 212.6 188 55.3
Ciclev10002228m.g Citrus clementina HOM05D006773 ORTHO05D008775 6.2e-53 211.8 237 48.5
Migut.N03240 Erythranthe guttata HOM05D006773 ORTHO05D008775 6.2e-53 211.8 236 48.3
Gohir.D02G073400 Gossypium hirsutum HOM05D006773 ORTHO05D008775 6.2e-53 211.8 227 47.6
Thecc.08G143200 Theobroma cacao HOM05D006773 ORTHO05D008775 1.1e-52 211.1 250 46.8
Gohir.A02G067200 Gossypium hirsutum HOM05D006773 ORTHO05D008775 1.4e-52 210.7 227 47.6
TWI60G1234 Tripterygium wilfordii HOM05D006773 ORTHO05D008775 1.4e-52 210.7 225 50.7
Atru.chr13.1690 Acer truncatum HOM05D006773 ORTHO05D008775 1.8e-52 210.3 230 50.0
AL2G37260 Arabidopsis lyrata HOM05D006773 ORTHO05D008775 2.3e-52 209.9 260 44.6
Gorai.005G082800 Gossypium raimondii HOM05D006773 ORTHO05D008775 4.0e-52 209.1 227 47.1
Carub.0002s2397 Capsella rubella HOM05D006773 ORTHO05D008775 8.9e-52 208.0 221 50.2
VMungo1309G1948 Vigna mungo HOM05D006773 ORTHO05D008775 8.9e-52 208.0 218 50.9
Nitab4.5_0004095g0010 Nicotiana tabacum HOM05D006773 ORTHO05D008775 1.2e-51 207.6 220 50.5
Phvul.009G134500 Phaseolus vulgaris HOM05D006773 ORTHO05D008775 1.2e-51 207.6 189 54.5
Actinidia16591 Actinidia chinensis HOM05D006773 ORTHO05D008775 1.5e-51 207.2 231 49.4
A07p42660 Brassica napus HOM05D006773 ORTHO05D008775 1.5e-51 207.2 221 50.7
CiPaw.15G022300 Carya illinoinensis HOM05D006773 ORTHO05D008775 2.0e-51 206.8 244 47.5
ClCG09G009710 Citrullus lanatus HOM05D006773 ORTHO05D008775 2.0e-51 206.8 244 47.1
Thhalv10000289m.g Eutrema salsugineum HOM05D006773 ORTHO05D008775 2.0e-51 206.8 220 49.5
Glyma.06G122400 Glycine max HOM05D006773 ORTHO05D008775 2.0e-51 206.8 229 48.0
CsaV3_7G025030 Cucumis sativus L. HOM05D006773 ORTHO05D008775 2.6e-51 206.5 244 48.4
CANSAT25G3413 Cannabis sativa HOM05D006773 ORTHO05D008775 3.4e-51 206.1 220 50.0
Thhalv10019004m.g Eutrema salsugineum HOM05D006773 ORTHO05D008775 3.4e-51 206.1 219 50.7
BcaC08g47206 Brassica carinata HOM05D006773 ORTHO05D008775 4.4e-51 205.7 221 50.2
C06p51250 Brassica napus HOM05D006773 ORTHO05D008775 4.4e-51 205.7 221 50.2
BraA07t31788Z Brassica rapa HOM05D006773 ORTHO05D008775 4.4e-51 205.7 221 50.2
Glyma.04G241000 Glycine max HOM05D006773 ORTHO05D008775 4.4e-51 205.7 226 49.1
Mapoly0002s0218 Marchantia polymorpha HOM05D006773 ORTHO05D008775 4.4e-51 205.7 246 49.2
Medtr3g089890 Medicago truncatula HOM05D006773 ORTHO05D008775 4.4e-51 205.7 215 49.8
Peaxi162Scf00263g00028 Petunia axillaris HOM05D006773 ORTHO05D008775 4.4e-51 205.7 220 50.0
Manes.02G174300 Manihot esculenta HOM05D006773 ORTHO05D008775 5.8e-51 205.3 257 45.1
Nitab4.5_0000445g0090 Nicotiana tabacum HOM05D006773 ORTHO05D008775 5.8e-51 205.3 220 49.5
HPP92_004476 Vanilla planifolia HOM05D006773 ORTHO05D008775 5.8e-51 205.3 188 55.3
AT1G77090 Arabidopsis thaliana HOM05D006773 ORTHO05D008775 7.5e-51 204.9 213 51.2
Haze_17696 Corylus avellana HOM05D006773 ORTHO05D005980 7.5e-51 204.9 220 50.5
MELO3C023682.2 Cucumis melo HOM05D006773 ORTHO05D008775 7.5e-51 204.9 244 47.5
THA.LOC104813693 Tarenaya hassleriana HOM05D006773 ORTHO05D008775 7.5e-51 204.9 258 45.7
ATR1136G180 Amborella trichopoda HOM05D006773 ORTHO05D008775 9.8e-51 204.5 250 44.8
Sabra02G0057000 Salix brachista HOM05D006773 ORTHO05D008775 9.8e-51 204.5 249 48.2
PGSC0003DMG401024815 Solanum tuberosum HOM05D006773 ORTHO05D008775 1.3e-50 204.1 220 48.6
FAN15G2829 Fragaria x ananassa HOM05D006773 ORTHO05D008775 1.7e-50 203.8 219 48.9
PSO541G0390 Papaver somniferum HOM05D006773 ORTHO05D008775 1.7e-50 203.8 220 50.5
QL09p028661 Quercus lobata HOM05D006773 ORTHO05D008775 1.7e-50 203.8 220 50.9
Sp5g32210 Schrenkiella parvula HOM05D006773 ORTHO05D008775 2.2e-50 203.4 219 48.4
GSVIVG01010018001 Vitis vinifera HOM05D006773 ORTHO05D008775 2.2e-50 203.4 260 45.8
Cfa018374 Carpinus fangiana HOM05D006773 ORTHO05D008775 2.9e-50 203.0 220 50.5
MD05G1012500 Malus domestica HOM05D006773 ORTHO05D008775 2.9e-50 203.0 237 46.8
PSO675G5006 Papaver somniferum HOM05D006773 ORTHO05D008775 2.9e-50 203.0 220 50.5
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 3.7e-50 202.6 225 48.0
Eucgr.F02746 Eucalyptus grandis HOM05D006773 ORTHO05D008775 3.7e-50 202.6 248 46.4
FvH4_2g14791 Fragaria vesca HOM05D006773 ORTHO05D008775 3.7e-50 202.6 261 44.4
arahy.Tifrunner.gnm1.ann1.85NLUF Arachis hypogaea HOM05D006773 ORTHO05D008775 4.9e-50 202.2 245 46.5
MSTRG.22383 Avicennia marina HOM05D006773 ORTHO05D008775 4.9e-50 202.2 230 48.3
CAN.G2.47 Capsicum annuum HOM05D006773 ORTHO05D008775 4.9e-50 202.2 264 43.9
Dinv25798 Davidia involucrata HOM05D006773 ORTHO05D008775 4.9e-50 202.2 262 44.7
Solyc04g064670.3 Solanum lycopersicum HOM05D006773 ORTHO05D008775 4.9e-50 202.2 262 42.7
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 6.4e-50 201.8 253 45.1
Lalb_Chr08g0240801 Lupinus albus HOM05D006773 ORTHO05D008775 6.4e-50 201.8 218 49.5
PRCOL_00003420 Prasinoderma coloniale HOM05D006773 ORTHO05D008775 6.4e-50 201.8 208 50.0
MD10G1012400 Malus domestica HOM05D006773 ORTHO05D008775 1.1e-49 201.1 219 48.4
Ah.16g108660 Amaranthus hybridus HOM05D006773 ORTHO05D008775 1.4e-49 200.7 201 52.2
Duzib093G1219 Durio zibethinus HOM05D006773 ORTHO05D008775 1.4e-49 200.7 275 42.9
Oeu025718.1 Olea europaea HOM05D006773 ORTHO05D008775 1.4e-49 200.7 246 45.5
Potri.002G072400 Populus trichocarpa HOM05D006773 ORTHO05D008775 1.4e-49 200.7 259 46.7
AagrBONN_evm.TU.Sc2ySwM_344.1575 Anthoceros agrestis HOM05D006773 ORTHO05D008775 1.9e-49 200.3 210 51.9
COL.COLO4_33185 Corchorus olitorius HOM05D006773 ORTHO05D008775 1.9e-49 200.3 198 52.5
CARHR070570 Cardamine hirsuta HOM05D006773 ORTHO05D008775 2.4e-49 199.9 217 47.5
TAR625G1315 Trochodendron aralioides HOM05D006773 ORTHO05D008775 3.2e-49 199.5 255 45.1
vmacro00729 Vaccinium macrocarpon HOM05D006773 ORTHO05D008775 3.2e-49 199.5 225 47.6
AUR62026790 Chenopodium quinoa HOM05D006773 ORTHO05D008775 4.1e-49 199.1 219 50.2
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 4.1e-49 199.1 231 45.9
Rhsim09G0002200 Rhododendron simsii HOM05D006773 ORTHO05D008775 5.4e-49 198.7 229 47.2
AUR62013482 Chenopodium quinoa HOM05D006773 ORTHO05D008775 7.0e-49 198.4 259 47.1
Sc20g0003340 Simmondsia chinensis HOM05D006773 ORTHO05D008775 9.2e-49 198.0 189 54.0
Os12g0190200 Oryza sativa ssp. japonica HOM05D006773 ORTHO05D008775 1.2e-48 197.6 256 44.9
RcHm_v2.0_Chr6g0277361 Rosa chinensis HOM05D006773 ORTHO05D008775 2.0e-48 196.8 261 44.8
DCAR_031498 Daucus carota HOM05D006773 ORTHO05D008775 2.7e-48 196.4 256 47.3
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 2.7e-48 196.4 217 49.3
MCO01G018 Micromonas commoda HOM05D006773 ORTHO05D008775 2.7e-48 196.4 210 46.7
Prupe.8G017800 Prunus persica HOM05D006773 ORTHO05D008775 4.6e-48 195.7 217 47.5
SMO270G0074 Selaginella moellendorffii HOM05D006773 ORTHO05D008775 4.6e-48 195.7 170 55.3
Cc10_g12990 Coffea canephora HOM05D006773 ORTHO05D008775 1.0e-47 194.5 222 48.2
MBI06_g41413_MAGBIO Magnolia biondii HOM05D006773 ORTHO05D008775 1.0e-47 194.5 176 54.0
SalBow6G0822 Salvia bowleyana HOM05D006773 ORTHO05D008775 1.7e-47 193.7 219 50.7
EL10Ac1g01469 Beta vulgaris HOM05D006773 ORTHO05D008775 3.0e-47 193.0 263 44.1
SGA_v2.0_scaffold19G08634 Striga asiatica HOM05D006773 ORTHO05D008775 8.6e-47 191.4 203 49.3
Atru.BG.245.p Acer truncatum HOM05D006773 ORTHO05D008775 1.5e-46 190.7 235 46.0
Nn5g28592 Nelumbo nucifera HOM05D006773 ORTHO05D008775 1.5e-46 190.7 170 53.5
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 1.5e-46 190.7 220 49.1
Lj7C363G2 Lonicera japonica HOM05D006773 ORTHO05D008775 1.9e-46 190.3 220 47.7
PGR042G0338 Punica granatum HOM05D006773 ORTHO05D008775 2.1e-45 186.8 233 45.1
Cpa.g.sc49.74 Carica papaya HOM05D006773 ORTHO05D008775 8.1e-45 184.9 197 50.3
TPR.G18761 Trifolium pratense HOM05D006773 ORTHO05D008775 8.1e-45 184.9 198 51.0
arahy.Tifrunner.gnm1.ann1.61R3GI Arachis hypogaea HOM05D006773 ORTHO05D008775 1.4e-44 184.1 170 51.8
FAN24G0253 Fragaria x ananassa HOM05D006773 ORTHO05D005980 3.1e-44 183.0 261 42.9
Sopen04g026630 Solanum pennellii HOM05D006773 ORTHO05D008775 3.1e-44 183.0 170 51.2
Sed0012245 Sechium edule HOM05D006773 ORTHO05D008775 4.0e-44 182.6 174 51.1
unitig_52.g17539 Utricularia gibba HOM05D006773 ORTHO05D008775 4.0e-44 182.6 173 52.0
Psat5g080880 Pisum sativum HOM05D006773 ORTHO05D008775 5.2e-44 182.2 206 49.5
FvH4_7g25010 Fragaria vesca HOM05D006773 ORTHO05D008775 3.4e-43 179.5 218 44.5
FAN06G4159 Fragaria x ananassa HOM05D006773 ORTHO05D008775 4.6e-32 142.5 172 45.9
SMO367G0103 Selaginella moellendorffii HOM05D006773 ORTHO05D008775 5.1e-31 139.0 136 50.7
HPP92_004480 Vanilla planifolia HOM05D006773 ORTHO05D008775 5.2e-28 129.0 188 40.4
CSS0027898 Camellia sinensis var. sinensis HOM05D006773 ORTHO05D008775 9.0e-28 128.3 168 46.4
SEGI_34187 Sequoiadendron giganteum HOM05D006773 ORTHO05D008775 1.1e-25 121.3 97 63.9
PSO017G5067 Papaver somniferum HOM05D006773 ORTHO05D008775 2.7e-24 116.7 110 53.6
CSS0029334 Camellia sinensis var. sinensis HOM05D006773 ORTHO05D008775 9.3e-17 91.7 100 45.0
Hma1.2p1_1563F.1_g290820 Hydrangea macrophylla HOM05D006773 ORTHO05D008775 2.1e-16 90.5 75 58.7
PSO339G0420 Papaver somniferum HOM05D007080 ORTHO05D008990 2.3e-15 87.0 163 28.2
PSO384G3013 Papaver somniferum HOM05D007080 ORTHO05D008990 2.3e-15 87.0 163 28.2
Pp3c4_10510 Physcomitrium patens HOM05D007080 ORTHO05D008990 8.7e-15 85.1 280 27.5
TPR.G22690 Trifolium pratense HOM05D007080 ORTHO05D008990 8.7e-15 85.1 230 24.8
AUR62030277 Chenopodium quinoa HOM05D007080 ORTHO05D008990 2.5e-14 83.6 163 27.6
Ca_08357_v3 Cicer arietinum L. HOM05D007080 ORTHO05D008990 2.5e-14 83.6 163 27.0
Medtr7g088880 Medicago truncatula HOM05D007080 ORTHO05D008990 4.3e-14 82.8 234 23.9
CAN.G199.26 Capsicum annuum HOM05D007080 ORTHO05D008990 5.6e-14 82.4 163 27.0
Sopen06g023980 Solanum pennellii HOM05D007080 ORTHO05D008990 5.6e-14 82.4 163 27.0
Thhalv10006177m.g Eutrema salsugineum HOM05D007080 ORTHO05D008990 7.4e-14 82.0 163 27.0
Nitab4.5_0006059g0030 Nicotiana tabacum HOM05D007080 ORTHO05D008990 7.4e-14 82.0 163 27.6
Glyma.19G126700 Glycine max HOM05D007080 ORTHO05D008990 9.6e-14 81.6 266 23.7
AL5G38020 Arabidopsis lyrata HOM05D007080 ORTHO05D008990 1.3e-13 81.3 163 26.4
ATR0307G091 Amborella trichopoda HOM05D007080 ORTHO05D008990 1.6e-13 80.9 163 25.8
Zm00001eb150500 Zea mays HOM05D007080 ORTHO05D008990 1.6e-13 80.9 230 25.2
AUR62018386 Chenopodium quinoa HOM05D007080 ORTHO05D008990 2.8e-13 80.1 276 24.3
Glyma.03G123100 Glycine max HOM05D007080 ORTHO05D008990 2.8e-13 80.1 163 26.4
Nitab4.5_0003160g0050 Nicotiana tabacum HOM05D007080 ORTHO05D008990 2.8e-13 80.1 163 27.0
PGSC0003DMG400026121 Solanum tuberosum HOM05D007080 ORTHO05D008990 3.7e-13 79.7 251 23.9
CARHR166760 Cardamine hirsuta HOM05D007080 ORTHO05D008990 4.8e-13 79.3 163 25.8
Eucgr.K01671 Eucalyptus grandis HOM05D007080 ORTHO05D008990 4.8e-13 79.3 257 24.5
Solyc06g065490.3 Solanum lycopersicum HOM05D007080 ORTHO05D008990 4.8e-13 79.3 251 23.5
VMungo1383G2155 Vigna mungo HOM05D007080 ORTHO05D008990 4.8e-13 79.3 163 25.8
Migut.K00153 Erythranthe guttata HOM05D007080 ORTHO05D008990 6.2e-13 79.0 231 23.8
AT3G56650 Arabidopsis thaliana HOM05D007080 ORTHO05D008990 8.1e-13 78.6 163 25.8
CBR_g17613 Chara braunii HOM05D007080 ORTHO05D008990 8.1e-13 78.6 163 28.2
CBR_g39641 Chara braunii HOM05D006773 ORTHO05D008775 8.1e-13 78.6 100 41.0
Haze_11136 Corylus avellana HOM05D007080 ORTHO05D008990 8.1e-13 78.6 163 25.8
Peaxi162Scf00076g00226 Petunia axillaris HOM05D007080 ORTHO05D008990 1.1e-12 78.2 163 25.8
SalBow1G6984 Salvia bowleyana HOM05D007080 ORTHO05D008990 1.8e-12 77.4 252 23.4
Cfa017504 Carpinus fangiana HOM05D007080 ORTHO05D008990 2.4e-12 77.0 163 25.2
RcHm_v2.0_Chr3g0492661 Rosa chinensis HOM05D007080 ORTHO05D008990 3.1e-12 76.6 249 22.5
TWI74G1494 Tripterygium wilfordii HOM05D007080 ORTHO05D008990 3.1e-12 76.6 163 26.4
arahy.Tifrunner.gnm1.ann1.10W9XD Arachis hypogaea HOM05D007080 ORTHO05D008990 4.0e-12 76.3 161 26.1
arahy.Tifrunner.gnm1.ann1.A7U9PP Arachis hypogaea HOM05D007080 ORTHO05D008990 4.0e-12 76.3 161 26.1
FAN28G0517 Fragaria x ananassa HOM05D007080 ORTHO05D008990 5.3e-12 75.9 163 25.2
CANSAT54G2774 Cannabis sativa HOM05D007080 ORTHO05D008990 9.0e-12 75.1 163 23.9
Phvul.001G119100 Phaseolus vulgaris HOM05D007080 ORTHO05D008990 9.0e-12 75.1 260 23.5
CDE02G2515 Ceratophyllum demersum HOM05D007080 ORTHO05D008990 2.0e-11 73.9 129 27.1
FvH4_1g28660 Fragaria vesca HOM05D007080 ORTHO05D008990 2.6e-11 73.6 239 22.6
AagrBONN_evm.TU.Sc2ySwM_368.1623 Anthoceros agrestis HOM05D006773 ORTHO05D008775 5.8e-11 72.4 221 29.4
FAN26G2541 Fragaria x ananassa HOM05D007080 ORTHO05D008990 5.8e-11 72.4 229 23.6
SGA_v2.0_scaffold240G44138 Striga asiatica HOM05D007080 ORTHO05D008990 5.8e-11 72.4 272 23.5
FAN19G3092 Fragaria x ananassa HOM05D007080 ORTHO05D008990 1.3e-10 71.2 239 22.2
RcHm_v2.0_Chr3g0492671 Rosa chinensis HOM05D007080 ORTHO05D008990 1.7e-10 70.9 154 27.3
THA.LOC104824268 Tarenaya hassleriana HOM05D002933 ORTHO05D007742 1.8e-07 60.8 152 25.0
Medtr6g018710 Medicago truncatula HOM05D006773 ORTHO05D008775 3.3e-06 56.6 61 41.0
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 4.3e-06 56.2 153 28.1
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 4.3e-06 56.2 153 28.8
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 5.6e-06 55.8 208 25.0
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 5.6e-06 55.8 153 28.1
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 5.6e-06 55.8 153 28.1
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 5.6e-06 55.8 153 28.1
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 5.6e-06 55.8 153 28.1
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 5.6e-06 55.8 153 28.8
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 7.4e-06 55.5 153 28.8
ATR1136G134 Amborella trichopoda HOM05D006773 ORTHO05D008775 9.6e-06 55.1 59 44.1


User provided reference genes

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