Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc99.22 Carica papaya HOM05D001685 ORTHO05D119922 3.6e-42 174.5 86 100.0
Lalb_Chr14g0369641 Lupinus albus HOM05D001685 ORTHO05D009095 8.6e-12 73.6 68 58.8
Potri.002G029600 Populus trichocarpa HOM05D001685 ORTHO05D009095 4.2e-11 71.2 72 54.2
Ciclev10000620m.g Citrus clementina HOM05D001685 ORTHO05D009095 7.2e-11 70.5 72 51.4
GSVIVG01009800001 Vitis vinifera HOM05D001685 ORTHO05D009095 3.6e-10 68.2 72 45.8
QL02p010383 Quercus lobata HOM05D001685 ORTHO05D009095 4.7e-10 67.8 73 47.9
QL02p010421 Quercus lobata HOM05D001685 ORTHO05D009095 4.7e-10 67.8 73 47.9
Haze_22569 Corylus avellana HOM05D001685 ORTHO05D009095 3.0e-09 65.1 72 47.2
Atru.chr13.382 Acer truncatum HOM05D001685 ORTHO05D009095 5.2e-09 64.3 72 45.8
CiPaw.07G155500 Carya illinoinensis HOM05D001685 ORTHO05D009095 6.8e-09 63.9 72 45.8
Prupe.1G372200 Prunus persica HOM05D001685 ORTHO05D009095 8.9e-09 63.5 72 45.8
RcHm_v2.0_Chr6g0301971 Rosa chinensis HOM05D001685 ORTHO05D009095 1.2e-08 63.2 74 47.3
Sabra05G0179800 Salix brachista HOM05D001685 ORTHO05D009095 2.0e-08 62.4 72 48.6
Cfa013891 Carpinus fangiana HOM05D001685 ORTHO05D009095 2.6e-08 62.0 74 44.6
Glyma.17G254500 Glycine max HOM05D001685 ORTHO05D009095 2.6e-08 62.0 68 50.0
CSS0037156 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D009095 3.4e-08 61.6 72 45.8
Dinv31798 Davidia involucrata HOM05D001685 ORTHO05D009095 4.4e-08 61.2 72 45.8
MD15G1020600 Malus domestica HOM05D001685 ORTHO05D009095 4.4e-08 61.2 72 43.1
PSO675G8938 Papaver somniferum HOM05D001685 ORTHO05D009095 4.4e-08 61.2 72 45.8
CSS0008119 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D009095 5.7e-08 60.8 73 45.2
Lj5g0015544 Lotus japonicus HOM05D001685 ORTHO05D009095 7.5e-08 60.5 70 50.0
Nn5g29153 Nelumbo nucifera HOM05D001685 ORTHO05D009095 7.5e-08 60.5 72 47.2
PSO541G2326 Papaver somniferum HOM05D001685 ORTHO05D009095 7.5e-08 60.5 72 44.4
EL10Ac1g00578 Beta vulgaris HOM05D001685 ORTHO05D009095 9.8e-08 60.1 69 47.8
Ca_13386_v3 Cicer arietinum L. HOM05D001685 ORTHO05D009095 4.9e-07 57.8 68 48.5
Glyma.14G070100 Glycine max HOM05D001685 ORTHO05D009095 4.9e-07 57.8 68 47.1
Hma1.2p1_1394F.1_g280400 Hydrangea macrophylla HOM05D001685 ORTHO05D009095 4.9e-07 57.8 70 45.7
TAR381G0057 Trochodendron aralioides HOM05D001685 ORTHO05D009095 4.9e-07 57.8 72 47.2
AUR62034545 Chenopodium quinoa HOM05D001685 ORTHO05D009095 8.3e-07 57.0 72 43.1
COL.COLO4_26223 Corchorus olitorius HOM05D001685 ORTHO05D009095 1.1e-06 56.6 72 44.4
FAN27G2561 Fragaria x ananassa HOM05D001685 ORTHO05D009095 1.4e-06 56.2 73 41.1
arahy.Tifrunner.gnm1.ann1.0FMT0L Arachis hypogaea HOM05D001685 ORTHO05D009095 2.4e-06 55.5 71 45.1
Gorai.009G271500 Gossypium raimondii HOM05D001685 ORTHO05D009095 3.1e-06 55.1 72 43.1
FvH4_2g38870 Fragaria vesca HOM05D001685 ORTHO05D009095 4.1e-06 54.7 73 41.1
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 4.1e-06 54.7 73 41.1
CANSAT25G3574 Cannabis sativa HOM05D001685 ORTHO05D009095 7.0e-06 53.9 68 45.6
Medtr1g023160 Medicago truncatula HOM05D001685 ORTHO05D009095 7.0e-06 53.9 70 42.9
Thecc.08G035400 Theobroma cacao HOM05D001685 ORTHO05D009095 7.0e-06 53.9 72 43.1
Gohir.A05G258300 Gossypium hirsutum HOM05D001685 ORTHO05D009095 9.2e-06 53.5 72 41.7
Solyc04g080900.3 Solanum lycopersicum HOM05D001685 ORTHO05D009095 9.2e-06 53.5 72 45.8


User provided reference genes

Program Settings