Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc96.35 Carica papaya HOM05D001620 ORTHO05D005461 6.0e-39 163.7 82 100.0
Cpa.g.sc9.334 Carica papaya HOM05D001620 ORTHO05D005461 7.4e-21 103.6 80 71.2
EL10Ac3g06031 Beta vulgaris HOM05D001620 ORTHO05D005461 9.0e-11 70.1 69 53.6
Gohir.A02G092600 Gossypium hirsutum HOM05D001620 ORTHO05D005461 3.4e-10 68.2 74 54.1
Migut.N03083 Erythranthe guttata HOM05D001620 ORTHO05D005461 4.5e-10 67.8 66 57.6
Gohir.D02G110700 Gossypium hirsutum HOM05D001620 ORTHO05D005461 5.8e-10 67.4 74 54.1
Gorai.005G125600 Gossypium raimondii HOM05D001620 ORTHO05D005461 5.8e-10 67.4 74 54.1
Cc03_g11940 Coffea canephora HOM05D001620 ORTHO05D005461 7.6e-10 67.0 66 57.6
Duzib212G0571 Durio zibethinus HOM05D001620 ORTHO05D005461 7.6e-10 67.0 67 56.7
Hund03188 Selenicereus undatus HOM05D001620 ORTHO05D005461 7.6e-10 67.0 66 59.1
Thecc.04G171200 Theobroma cacao HOM05D001620 ORTHO05D005461 2.2e-09 65.5 67 55.2
QL10p052582 Quercus lobata HOM05D001620 ORTHO05D005461 3.8e-09 64.7 69 59.4
Sc19g0002780 Simmondsia chinensis HOM05D001620 ORTHO05D005461 3.8e-09 64.7 67 55.2
Cfa015222 Carpinus fangiana HOM05D001620 ORTHO05D005461 5.0e-09 64.3 69 58.0
Haze_01414 Corylus avellana HOM05D001620 ORTHO05D005461 5.0e-09 64.3 69 58.0
Ciclev10021852m.g Citrus clementina HOM05D001620 ORTHO05D005461 1.1e-08 63.2 65 52.3
COL.COLO4_28387 Corchorus olitorius HOM05D001620 ORTHO05D005461 1.4e-08 62.8 74 48.6
Dinv44168 Davidia involucrata HOM05D001620 ORTHO05D005461 1.9e-08 62.4 65 58.5
GSVIVG01038096001 Vitis vinifera HOM05D001620 ORTHO05D005461 2.5e-08 62.0 77 53.2
CAN.G1186.27 Capsicum annuum HOM05D001620 ORTHO05D005461 3.2e-08 61.6 66 51.5
CiPaw.01G173100 Carya illinoinensis HOM05D001620 ORTHO05D005461 3.2e-08 61.6 69 55.1
Nn7g37619 Nelumbo nucifera HOM05D001620 ORTHO05D005461 4.2e-08 61.2 66 54.5
SalBow6G2343 Salvia bowleyana HOM05D001620 ORTHO05D005461 4.2e-08 61.2 67 58.2
Oeu015935.2 Olea europaea HOM05D001620 ORTHO05D005461 5.5e-08 60.8 71 54.9
PSO675G0461 Papaver somniferum HOM05D001620 ORTHO05D005461 7.1e-08 60.5 68 51.5
Hma1.2p1_2359F.1_g320596 Hydrangea macrophylla HOM05D001620 ORTHO05D005461 9.3e-08 60.1 67 59.7
Lalb_Chr23g0275861 Lupinus albus HOM05D001620 ORTHO05D005461 9.3e-08 60.1 65 53.8
MBI07_g02902_MAGBIO Magnolia biondii HOM05D001620 ORTHO05D005461 9.3e-08 60.1 68 54.4
MD04G1047000 Malus domestica HOM05D001620 ORTHO05D005461 2.7e-07 58.5 65 58.5
Haze_01411 Corylus avellana HOM05D001620 ORTHO05D005461 4.6e-07 57.8 69 53.6
Prupe.1G201600 Prunus persica HOM05D001620 ORTHO05D005461 4.6e-07 57.8 69 59.4
ClCG07G015080 Citrullus lanatus HOM05D001620 ORTHO05D005461 7.9e-07 57.0 66 53.0
TAR365G0548 Trochodendron aralioides HOM05D001620 ORTHO05D005461 7.9e-07 57.0 65 52.3
Manes.11G127400 Manihot esculenta HOM05D001620 ORTHO05D005461 1.0e-06 56.6 79 50.6
CANSAT54G0752 Cannabis sativa HOM05D001620 ORTHO05D005461 1.8e-06 55.8 67 53.7
PGR014G0005 Punica granatum HOM05D001620 ORTHO05D005461 1.8e-06 55.8 68 50.0
PGR083G0805 Punica granatum HOM05D001620 ORTHO05D005461 1.8e-06 55.8 68 50.0
Atru.chr4.1349 Acer truncatum HOM05D001620 ORTHO05D005461 2.3e-06 55.5 42 66.7
MSTRG.22018 Avicennia marina HOM05D001620 ORTHO05D005461 2.3e-06 55.5 67 53.7
ATR0743G190 Amborella trichopoda HOM05D001620 ORTHO05D005461 3.0e-06 55.1 66 53.0
CsaV3_4G002630 Cucumis sativus L. HOM05D001620 ORTHO05D005461 3.0e-06 55.1 65 49.2
Psat5g291680 Pisum sativum HOM05D001620 ORTHO05D005461 3.0e-06 55.1 67 49.3
Sed0025758 Sechium edule HOM05D001620 ORTHO05D005461 3.0e-06 55.1 66 47.0
Solyc11g045220.2 Solanum lycopersicum HOM05D001620 ORTHO05D005461 3.0e-06 55.1 64 51.6
Sopen11g020680 Solanum pennellii HOM05D001620 ORTHO05D005461 3.0e-06 55.1 64 51.6
PGSC0003DMG400022873 Solanum tuberosum HOM05D001620 ORTHO05D005461 3.0e-06 55.1 64 51.6
Ca_01237_v3 Cicer arietinum L. HOM05D001620 ORTHO05D005461 3.9e-06 54.7 65 52.3
Nitab4.5_0001481g0050 Nicotiana tabacum HOM05D001620 ORTHO05D005461 3.9e-06 54.7 64 51.6
Lsat_1_v5_gn_3_109820 Lactuca sativa HOM05D001620 ORTHO05D005461 6.7e-06 53.9 73 46.6
Eucgr.A00034 Eucalyptus grandis HOM05D001620 ORTHO05D005461 8.7e-06 53.5 76 40.8
unitig_85.g27224 Utricularia gibba HOM05D004939 ORTHO05D005843 8.7e-06 53.5 67 49.3


User provided reference genes

Program Settings