Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 1.7e-39 165.6 86 100.0
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 3.5e-21 104.8 72 75.0
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 5.9e-21 104.0 72 73.6
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 1.0e-20 103.2 72 73.6
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.0e-20 103.2 84 65.5
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 1.3e-20 102.8 71 74.6
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.7e-20 102.4 70 74.3
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 1.7e-20 102.4 72 69.4
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 2.9e-20 101.7 59 78.0
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 3.8e-20 101.3 72 73.6
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 6.5e-20 100.5 66 75.8
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 6.5e-20 100.5 83 69.9
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 8.5e-20 100.1 55 87.3
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.1e-19 99.8 64 78.1
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.1e-19 99.8 64 78.1
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 4.2e-19 97.8 72 69.4
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 7.2e-19 97.1 54 85.2
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 9.4e-19 96.7 53 88.7
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 9.4e-19 96.7 72 69.4
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 9.4e-19 96.7 72 69.4
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 9.4e-19 96.7 72 69.4
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 9.4e-19 96.7 72 68.1
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 1.6e-18 95.9 73 72.6
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 2.1e-18 95.5 75 64.0
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 3.6e-18 94.7 73 67.1
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 4.7e-18 94.4 64 73.4
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 1.0e-17 93.2 68 66.2
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 1.4e-17 92.8 74 67.6
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 1.4e-17 92.8 73 65.8
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 1.4e-17 92.8 64 75.0
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 3.0e-17 91.7 73 63.0
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 3.0e-17 91.7 61 70.5
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 3.0e-17 91.7 63 69.8
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 5.2e-17 90.9 66 68.2
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 5.2e-17 90.9 64 68.8
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 8.8e-17 90.1 56 80.4
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 1.2e-16 89.7 55 76.4
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 1.5e-16 89.4 55 76.4
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 1.5e-16 89.4 63 66.7
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 2.0e-16 89.0 61 72.1
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 2.0e-16 89.0 70 68.6
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 2.6e-16 88.6 67 70.1
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 3.4e-16 88.2 63 68.3
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 4.4e-16 87.8 67 70.1
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 4.4e-16 87.8 54 75.9
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 7.5e-16 87.0 73 60.3
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 7.5e-16 87.0 73 60.3
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 7.5e-16 87.0 62 69.4
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 9.8e-16 86.7 67 68.7
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 9.8e-16 86.7 67 68.7
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 9.8e-16 86.7 67 68.7
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 9.8e-16 86.7 67 68.7
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 1.3e-15 86.3 80 61.2
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.3e-15 86.3 55 72.7
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 6.3e-15 84.0 61 67.2
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 1.4e-14 82.8 72 59.7
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 3.1e-14 81.6 73 58.9
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 7.0e-14 80.5 64 64.1
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 9.1e-14 80.1 64 70.3
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 9.1e-14 80.1 67 64.2
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 9.1e-14 80.1 50 72.0
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 1.2e-13 79.7 66 62.1
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 2.7e-13 78.6 65 61.5
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 2.7e-13 78.6 65 61.5
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 3.5e-13 78.2 63 61.9
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 1.0e-12 76.6 65 60.0
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 1.0e-12 76.6 65 61.5
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 5.0e-12 74.3 40 85.0
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 1.9e-11 72.4 66 59.1
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 2.8e-10 68.6 49 69.4
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 6.1e-10 67.4 48 75.0
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.4e-09 66.2 72 48.6
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 3.0e-09 65.1 34 88.2
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 8.3e-07 57.0 51 49.0
FvH4_5g27461 Fragaria vesca HOM05D007238 ORTHO05D009206 3.1e-06 55.1 51 60.8


User provided reference genes

Program Settings