Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.5 Carica papaya HOM05D002153 ORTHO05D002137 5.6e-153 544.3 281 100.0
QL03p023659 Quercus lobata HOM05D002153 ORTHO05D002137 1.2e-59 234.2 274 50.4
Dinv15136 Davidia involucrata HOM05D002153 ORTHO05D002137 8.0e-59 231.5 280 52.1
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 1.5e-57 227.3 277 52.3
GSVIVG01034951001 Vitis vinifera HOM05D002153 ORTHO05D002137 2.6e-57 226.5 279 50.9
Cfa015276 Carpinus fangiana HOM05D002153 ORTHO05D002137 4.9e-56 222.2 278 51.4
COL.COLO4_34568 Corchorus olitorius HOM05D002153 ORTHO05D002137 1.8e-55 220.3 277 48.0
Thecc.04G306000 Theobroma cacao HOM05D002153 ORTHO05D002137 4.1e-55 219.2 277 49.1
Dinv44255 Davidia involucrata HOM05D002153 ORTHO05D002137 1.6e-54 217.2 280 49.3
Prupe.1G112900 Prunus persica HOM05D002153 ORTHO05D002137 2.7e-54 216.5 278 48.9
MD13G1148800 Malus domestica HOM05D002153 ORTHO05D002137 5.0e-53 212.2 278 47.8
Manes.03G207800 Manihot esculenta HOM05D002153 ORTHO05D002137 1.2e-51 207.6 277 45.8
Rhsim04G0242200 Rhododendron simsii HOM05D002153 ORTHO05D002137 2.8e-51 206.5 279 47.3
MD16G1149100 Malus domestica HOM05D002153 ORTHO05D002137 4.7e-51 205.7 278 47.8
CiPaw.01G134500 Carya illinoinensis HOM05D002153 ORTHO05D002137 2.3e-50 203.4 277 47.3
Ciclev10004408m.g Citrus clementina HOM05D002153 ORTHO05D002137 6.8e-50 201.8 282 46.5
CiPaw.02G072500 Carya illinoinensis HOM05D002153 ORTHO05D002137 1.2e-49 201.1 277 46.9
Actinidia31568 Actinidia chinensis HOM05D002153 ORTHO05D002137 2.0e-49 200.3 277 44.8
CANSAT78G1175 Cannabis sativa HOM05D002153 ORTHO05D002137 5.8e-49 198.7 281 43.8
Duzib212G0181 Durio zibethinus HOM05D002153 ORTHO05D002137 2.2e-48 196.8 274 46.7
Duzib151G1027 Durio zibethinus HOM05D002153 ORTHO05D002137 4.1e-47 192.6 267 46.1
FAN07G0860 Fragaria x ananassa HOM05D002153 ORTHO05D002137 5.4e-47 192.2 278 46.0
CSS0033074 Camellia sinensis var. sinensis HOM05D002153 ORTHO05D002137 2.0e-46 190.3 279 45.5
Eucgr.B03981 Eucalyptus grandis HOM05D002153 ORTHO05D002137 3.5e-46 189.5 274 44.2
PGR031G1058 Punica granatum HOM05D002153 ORTHO05D002137 7.8e-46 188.3 271 42.1
vmacro07964 Vaccinium macrocarpon HOM05D002153 ORTHO05D002137 7.8e-46 188.3 277 45.8
TWI73G1003 Tripterygium wilfordii HOM05D002153 ORTHO05D002137 3.9e-45 186.0 274 46.4
Hma1.2p1_1400F.1_g280980 Hydrangea macrophylla HOM05D002153 ORTHO05D002137 6.6e-45 185.3 274 45.6
Potri.010G148900 Populus trichocarpa HOM05D002153 ORTHO05D002137 8.6e-45 184.9 282 44.0
Glyma.09G032800 Glycine max HOM05D002153 ORTHO05D002137 1.5e-44 184.1 275 44.4
Gohir.A10G174700 Gossypium hirsutum HOM05D002153 ORTHO05D002137 1.9e-44 183.7 260 45.0
Gorai.011G202700 Gossypium raimondii HOM05D002153 ORTHO05D002137 4.3e-44 182.6 260 44.6
TWI53G0831 Tripterygium wilfordii HOM05D002153 ORTHO05D002137 2.1e-43 180.3 276 44.9
TAR633G0564 Trochodendron aralioides HOM05D002153 ORTHO05D002137 2.1e-43 180.3 277 43.3
Glyma.15G137800 Glycine max HOM05D002153 ORTHO05D002137 4.7e-43 179.1 275 42.9
Sed0005370 Sechium edule HOM05D002153 ORTHO05D002137 6.2e-43 178.7 277 41.9
Gohir.D10G181200 Gossypium hirsutum HOM05D002153 ORTHO05D002137 1.1e-42 177.9 260 43.5
Phvul.006G120300 Phaseolus vulgaris HOM05D002153 ORTHO05D002137 1.5e-41 174.1 275 42.2
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 4.9e-40 169.1 274 41.6
VMungo0540G0227 Vigna mungo HOM05D002153 ORTHO05D002137 4.9e-40 169.1 275 41.5
Lj6g0011183 Lotus japonicus HOM05D002153 ORTHO05D002137 6.4e-40 168.7 276 42.4
Lj3A834G66 Lonicera japonica HOM05D002153 ORTHO05D002137 1.4e-39 167.5 279 41.6
arahy.Tifrunner.gnm1.ann1.K3Q6F6 Arachis hypogaea HOM05D002153 ORTHO05D002137 2.4e-39 166.8 282 39.7
arahy.Tifrunner.gnm1.ann1.P1PAWM Arachis hypogaea HOM05D002153 ORTHO05D002137 2.4e-39 166.8 282 39.7
Sabra10G0114900 Salix brachista HOM05D002153 ORTHO05D002137 2.4e-39 166.8 282 41.8
TPR.G33910 Trifolium pratense HOM05D002153 ORTHO05D002137 4.1e-39 166.0 277 40.8
THA.LOC104802710 Tarenaya hassleriana HOM05D002153 ORTHO05D002137 7.1e-39 165.2 272 40.8
Ca_00958_v3 Cicer arietinum L. HOM05D002153 ORTHO05D002137 9.2e-39 164.9 272 41.2
Lsat_1_v5_gn_6_116141 Lactuca sativa HOM05D002153 ORTHO05D002137 9.2e-39 164.9 278 42.1
DCAR_030450 Daucus carota HOM05D002153 ORTHO05D002137 1.2e-38 164.5 278 41.4
ClCG06G004400 Citrullus lanatus HOM05D002153 ORTHO05D002137 1.6e-38 164.1 275 41.8
TAR362G0075 Trochodendron aralioides HOM05D002153 ORTHO05D002137 2.1e-38 163.7 306 39.2
Aa31LG11G8370 Aethionema arabicum HOM05D002153 ORTHO05D002137 1.0e-37 161.4 273 39.6
Medtr2g033460 Medicago truncatula HOM05D002153 ORTHO05D002137 8.6e-37 158.3 272 40.4
Lalb_Chr18g0058541 Lupinus albus HOM05D002153 ORTHO05D002137 4.3e-36 156.0 272 39.7
Migut.G00037 Erythranthe guttata HOM05D002153 ORTHO05D002137 5.6e-36 155.6 274 39.4
Lj6C694G9 Lonicera japonica HOM05D002153 ORTHO05D002137 7.3e-36 155.2 275 41.1
MELO3C021254.2 Cucumis melo HOM05D002153 ORTHO05D002137 1.2e-35 154.5 259 40.2
Cc03_g00520 Coffea canephora HOM05D002153 ORTHO05D002137 3.6e-35 152.9 271 38.0
MSTRG.3844 Avicennia marina HOM05D002153 ORTHO05D002137 5.2e-34 149.1 290 39.3
Lalb_Chr20g0120661 Lupinus albus HOM05D002153 ORTHO05D002137 5.2e-34 149.1 272 40.4
HanXRQChr09g0250461 Helianthus annuus HOM05D002153 ORTHO05D002137 4.4e-33 146.0 272 37.9
SalBow8G1973 Salvia bowleyana HOM05D002153 ORTHO05D002137 1.3e-32 144.4 277 36.5
Thhalv10003750m.g Eutrema salsugineum HOM05D002153 ORTHO05D002137 1.7e-32 144.1 270 38.5
AL8G23400 Arabidopsis lyrata HOM05D002153 ORTHO05D002137 8.4e-32 141.7 274 36.1
Sc13g0007070 Simmondsia chinensis HOM05D002153 ORTHO05D002137 2.4e-31 140.2 280 37.1
SGA_v2.0_scaffold64G22095 Striga asiatica HOM05D002153 ORTHO05D002137 1.2e-30 137.9 280 32.9
CARHR288030 Cardamine hirsuta HOM05D002153 ORTHO05D002137 1.6e-30 137.5 275 36.4
Carub.0008s0945 Capsella rubella HOM05D002153 ORTHO05D002137 2.1e-30 137.1 272 36.0
Nn3g21802 Nelumbo nucifera HOM05D002153 ORTHO05D002137 2.7e-30 136.7 278 37.8
Sp2g19900 Schrenkiella parvula HOM05D002153 ORTHO05D002137 2.7e-30 136.7 273 37.7
AT5G49580 Arabidopsis thaliana HOM05D002153 ORTHO05D002137 3.5e-30 136.3 273 35.9
Atru.BG.95.p Acer truncatum HOM05D002153 ORTHO05D002137 1.7e-29 134.0 120 58.3
EL10Ac3g05553 Beta vulgaris HOM05D002153 ORTHO05D002137 1.7e-29 134.0 273 35.2
BolC7t44533H Brassica oleracea HOM05D002153 ORTHO05D002137 1.7e-29 134.0 270 35.9
BcaNung05956 Brassica carinata HOM05D002153 ORTHO05D002137 3.0e-29 133.3 270 35.9
C07p40000 Brassica napus HOM05D002153 ORTHO05D002137 3.0e-29 133.3 270 35.9
PSO729G0267 Papaver somniferum HOM05D002153 ORTHO05D002137 1.5e-28 131.0 281 34.5
Aqoxy5G02710 Aquilegia oxysepala HOM05D002153 ORTHO05D002137 1.9e-28 130.6 272 34.9
BcaC06g30719 Brassica carinata HOM05D002153 ORTHO05D002137 1.9e-28 130.6 276 35.9
MSTRG.10169 Avicennia marina HOM05D002153 ORTHO05D002137 2.1e-27 127.1 218 39.4
MBI18_g27381_MAGBIO Magnolia biondii HOM05D002153 ORTHO05D002137 1.4e-26 124.4 136 50.0
PSO724G0612 Papaver somniferum HOM05D002153 ORTHO05D002137 3.1e-26 123.2 283 32.5
RcHm_v2.0_Chr4g0426071 Rosa chinensis HOM05D002153 ORTHO05D002137 2.6e-25 120.2 125 51.2
Oeu045760.1 Olea europaea HOM05D002153 ORTHO05D002137 5.8e-25 119.0 272 32.0
Ah.13g071530 Amaranthus hybridus HOM05D002153 ORTHO05D002137 2.2e-24 117.1 270 35.2
Oeu022729.1 Olea europaea HOM05D002153 ORTHO05D002137 2.9e-24 116.7 157 42.0
A06p38230 Brassica napus HOM05D002153 ORTHO05D002137 1.1e-23 114.8 275 33.1
BraA06t26738Z Brassica rapa HOM05D002153 ORTHO05D002137 1.4e-23 114.4 275 33.1
unitig_32.g11846 Utricularia gibba HOM05D002153 ORTHO05D002137 7.1e-23 112.1 273 31.5
CAN.G244.17 Capsicum annuum HOM05D002153 ORTHO05D002137 2.1e-22 110.5 291 33.3
Solyc07g026810.3 Solanum lycopersicum HOM05D002153 ORTHO05D002137 1.0e-21 108.2 278 34.5
CDE02G2661 Ceratophyllum demersum HOM05D002153 ORTHO05D002137 5.1e-21 105.9 133 45.9
Peaxi162Scf00228g00736 Petunia axillaris HOM05D002153 ORTHO05D002137 8.7e-21 105.1 292 34.2
Hund03141 Selenicereus undatus HOM05D002153 ORTHO05D002137 1.9e-20 104.0 273 31.1
Sopen07g011920 Solanum pennellii HOM05D002153 ORTHO05D002137 1.9e-20 104.0 278 33.5
Psat1g162440 Pisum sativum HOM05D002153 ORTHO05D002137 2.5e-20 103.6 70 70.0
ATR0693G275 Amborella trichopoda HOM05D002153 ORTHO05D002137 3.3e-20 103.2 274 31.8
Nitab4.5_0002264g0010 Nicotiana tabacum HOM05D002153 ORTHO05D002137 1.2e-17 94.7 308 30.8
Nitab4.5_0003420g0020 Nicotiana tabacum HOM05D002153 ORTHO05D002137 7.6e-17 92.0 301 31.6
PSO724G0123 Papaver somniferum HOM05D002153 ORTHO05D002137 2.2e-16 90.5 97 49.5
Hund11995 Selenicereus undatus HOM05D002153 ORTHO05D002137 2.2e-16 90.5 131 40.5
SEGI_27903 Sequoiadendron giganteum HOM05D002153 ORTHO05D002137 8.4e-16 88.6 310 29.4
Migut.G00036 Erythranthe guttata HOM05D002153 ORTHO05D002137 3.2e-15 86.7 230 32.2
MBI19_g03280_MAGBIO Magnolia biondii HOM05D002153 ORTHO05D002137 2.1e-14 84.0 273 30.8
Zm00001eb211330 Zea mays HOM05D002153 ORTHO05D002137 1.3e-13 81.3 204 29.9
SHI00104 Sapria himalayana HOM05D002153 ORTHO05D002137 5.1e-13 79.3 234 27.4
RcHm_v2.0_Chr4g0426081 Rosa chinensis HOM05D002153 ORTHO05D002137 6.7e-13 79.0 109 49.5
SEGI_20213 Sequoiadendron giganteum HOM05D002153 ORTHO05D002137 3.7e-11 73.2 104 35.6
HPP92_013512 Vanilla planifolia HOM05D002153 ORTHO05D002137 2.0e-09 67.4 268 26.1
CsaV3_6G028420 Cucumis sativus L. HOM05D002153 ORTHO05D002137 2.4e-07 60.5 47 70.2
CsaV3_UNG230090 Cucumis sativus L. HOM05D002153 ORTHO05D002137 2.4e-07 60.5 47 70.2
SEGI_04700 Sequoiadendron giganteum HOM05D002153 ORTHO05D002137 7.1e-07 58.9 96 32.3
Pp3c24_9110 Physcomitrium patens HOM05D002153 ORTHO05D002137 1.2e-06 58.2 102 31.4


User provided reference genes

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