Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc74.62 Carica papaya HOM05D000730 ORTHO05D000578 5.2e-23 110.2 54 100.0
QL12p017589 Quercus lobata HOM05D000730 ORTHO05D000578 2.7e-11 71.2 52 69.2
Dinv38994 Davidia involucrata HOM05D000730 ORTHO05D000578 1.7e-10 68.6 53 66.0
Aqoxy5G03962 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 6.6e-10 66.6 53 64.2
Haze_08931 Corylus avellana HOM05D000730 ORTHO05D000578 1.1e-09 65.9 52 65.4
Actinidia02031 Actinidia chinensis HOM05D000730 ORTHO05D000578 4.3e-09 63.9 53 62.3
CiPaw.11G139500 Carya illinoinensis HOM05D000730 ORTHO05D000578 7.3e-09 63.2 52 67.3
Cfa012119 Carpinus fangiana HOM05D000730 ORTHO05D000578 1.6e-08 62.0 52 63.5
AUR62010634 Chenopodium quinoa HOM05D000730 ORTHO05D000578 4.7e-08 60.5 53 56.6
BcaB01g01672 Brassica carinata HOM05D000730 ORTHO05D000578 6.1e-08 60.1 51 58.8
BcaC04g21166 Brassica carinata HOM05D000730 ORTHO05D000578 6.1e-08 60.1 51 58.8
A09p27470 Brassica napus HOM05D000730 ORTHO05D000578 6.1e-08 60.1 51 58.8
C09p34790 Brassica napus HOM05D000730 ORTHO05D000578 6.1e-08 60.1 51 58.8
BolC9t56324H Brassica oleracea HOM05D000730 ORTHO05D000578 6.1e-08 60.1 51 58.8
COL.COLO4_05255 Corchorus olitorius HOM05D000730 ORTHO05D000578 6.1e-08 60.1 52 59.6
Sabra01G0081900 Salix brachista HOM05D000730 ORTHO05D000578 6.1e-08 60.1 53 60.4
TAR375G0386 Trochodendron aralioides HOM05D000730 ORTHO05D000578 6.1e-08 60.1 53 60.4
AT4G11670 Arabidopsis thaliana HOM05D000730 ORTHO05D000578 1.0e-07 59.3 51 56.9
EL10Ac5g12746 Beta vulgaris HOM05D000730 ORTHO05D000578 1.0e-07 59.3 53 54.7
Sp6g05800 Schrenkiella parvula HOM05D000730 ORTHO05D000578 1.0e-07 59.3 51 58.8
Potri.001G108400 Populus trichocarpa HOM05D000730 ORTHO05D000578 1.4e-07 58.9 53 60.4
Thecc.03G272900 Theobroma cacao HOM05D000730 ORTHO05D000578 1.8e-07 58.5 52 61.5
Aa31LG9G10680 Aethionema arabicum HOM05D000730 ORTHO05D000578 2.3e-07 58.2 51 52.9
BraA09t38315Z Brassica rapa HOM05D000730 ORTHO05D000578 2.3e-07 58.2 51 56.9
ClCG00G000280 Citrullus lanatus HOM05D000730 ORTHO05D000578 2.3e-07 58.2 54 57.4
Atru.chr9.1560 Acer truncatum HOM05D000730 ORTHO05D000578 5.2e-07 57.0 53 56.6
ClCG10G003540 Citrullus lanatus HOM05D000730 ORTHO05D000578 5.2e-07 57.0 52 57.7
MD00G1110400 Malus domestica HOM05D000730 ORTHO05D000578 5.2e-07 57.0 36 75.0
RcHm_v2.0_Chr7g0198971 Rosa chinensis HOM05D000730 ORTHO05D000578 5.2e-07 57.0 34 79.4
Sed0026891 Sechium edule HOM05D000730 ORTHO05D000578 5.2e-07 57.0 52 55.8
Thhalv10028371m.g Eutrema salsugineum HOM05D000730 ORTHO05D000578 6.8e-07 56.6 51 56.9
Manes.01G065400 Manihot esculenta HOM05D000730 ORTHO05D000578 6.8e-07 56.6 53 58.5
AL6G46270 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 8.9e-07 56.2 51 54.9
Gohir.A03G018300 Gossypium hirsutum HOM05D000730 ORTHO05D000578 8.9e-07 56.2 52 59.6
Gohir.D03G153300 Gossypium hirsutum HOM05D000730 ORTHO05D000578 8.9e-07 56.2 53 62.3
Nn6g34206 Nelumbo nucifera HOM05D000730 ORTHO05D000578 8.9e-07 56.2 53 56.6
THA.LOC104806377 Tarenaya hassleriana HOM05D000730 ORTHO05D000578 8.9e-07 56.2 51 51.0
TWI81G0743 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 8.9e-07 56.2 53 60.4
MELO3C014023.2 Cucumis melo HOM05D000730 ORTHO05D000578 1.2e-06 55.8 52 53.8
Lj8A236T44 Lonicera japonica HOM05D000730 ORTHO05D000578 1.2e-06 55.8 53 54.7
ClCG00G001770 Citrullus lanatus HOM05D000730 ORTHO05D000578 1.5e-06 55.5 52 57.7
CsaV3_3G003550 Cucumis sativus L. HOM05D000730 ORTHO05D000578 1.5e-06 55.5 52 53.8
Ah.12g057520 Amaranthus hybridus HOM05D000730 ORTHO05D000578 3.4e-06 54.3 52 53.8
Gorai.003G160900 Gossypium raimondii HOM05D000730 ORTHO05D000578 3.4e-06 54.3 52 63.5
FvH4_5g01750 Fragaria vesca HOM05D000730 ORTHO05D000578 4.4e-06 53.9 34 76.5
FAN04G2748 Fragaria x ananassa HOM05D000730 ORTHO05D000578 4.4e-06 53.9 34 76.5
FAN08G1404 Fragaria x ananassa HOM05D000730 ORTHO05D000578 4.4e-06 53.9 51 56.9
FAN18G2185 Fragaria x ananassa HOM05D000730 ORTHO05D000578 4.4e-06 53.9 34 76.5
MBI12_g43910_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 5.8e-06 53.5 52 53.8


User provided reference genes

Program Settings