Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc685.2 Carica papaya HOM05D006234 ORTHO05D007813 2.5e-130 468.8 234 100.0
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 3.8e-78 295.4 153 87.6
Sc10g0010120 Simmondsia chinensis HOM05D006234 ORTHO05D007813 4.9e-78 295.0 151 90.1
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 5.4e-77 291.6 153 88.2
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 9.3e-77 290.8 162 84.0
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 7.9e-76 287.7 153 87.6
EL10Ac5g10733 Beta vulgaris HOM05D006234 ORTHO05D007813 1.8e-75 286.6 151 87.4
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 1.8e-75 286.6 149 89.9
Os05g0170800 Oryza sativa ssp. japonica HOM05D006234 ORTHO05D007813 8.7e-75 284.3 151 85.4
AUR62030948 Chenopodium quinoa HOM05D006234 ORTHO05D007813 1.1e-74 283.9 151 87.4
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 1.1e-74 283.9 153 85.6
Hund09446 Selenicereus undatus HOM05D006234 ORTHO05D007813 1.9e-74 283.1 153 86.3
Eucgr.K02833 Eucalyptus grandis HOM05D006234 ORTHO05D007813 2.5e-74 282.7 153 85.0
AUR62008196 Chenopodium quinoa HOM05D006234 ORTHO05D007813 3.3e-74 282.3 151 87.4
Zm00001eb345780 Zea mays HOM05D006234 ORTHO05D007813 3.3e-74 282.3 151 84.8
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 2.1e-73 279.6 146 88.4
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 2.1e-73 279.6 146 88.4
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 2.1e-73 279.6 146 88.4
Sopen12g011710 Solanum pennellii HOM05D006234 ORTHO05D007813 2.8e-73 279.3 153 84.3
Ciclev10021475m.g Citrus clementina HOM05D006234 ORTHO05D007813 3.6e-73 278.9 153 83.0
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 8.1e-73 277.7 149 85.2
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 8.1e-73 277.7 153 84.3
FAN13G1809 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.8e-72 276.6 149 84.6
Ah.02g110560 Amaranthus hybridus HOM05D006234 ORTHO05D007813 5.3e-72 275.0 144 88.2
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 5.3e-72 275.0 144 87.5
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 5.3e-72 275.0 144 87.5
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 9.0e-72 274.2 147 86.4
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 9.0e-72 274.2 144 87.5
Oeu020907.1 Olea europaea HOM05D006234 ORTHO05D007813 1.2e-71 273.9 144 88.2
Zm00001eb124590 Zea mays HOM05D006234 ORTHO05D007813 1.2e-71 273.9 158 80.4
SalBow6G3516 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.5e-71 273.5 151 86.1
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 1.5e-71 273.5 144 87.5
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 3.4e-71 272.3 141 90.1
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 4.5e-71 271.9 139 90.6
QL10p010716 Quercus lobata HOM05D006234 ORTHO05D007813 5.8e-71 271.6 141 89.4
QL10p011029 Quercus lobata HOM05D006234 ORTHO05D007813 5.8e-71 271.6 141 89.4
Nitab4.5_0001514g0060 Nicotiana tabacum HOM05D006234 ORTHO05D007813 9.9e-71 270.8 146 85.6
SalBow5G5218 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.3e-70 270.4 150 84.7
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 1.7e-70 270.0 151 82.1
SGA_v2.0_scaffold90G27902 Striga asiatica HOM05D006234 ORTHO05D007813 1.7e-70 270.0 145 89.0
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 2.2e-70 269.6 144 88.2
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 2.9e-70 269.2 142 87.3
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 4.9e-70 268.5 146 84.9
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 4.9e-70 268.5 144 86.1
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 6.4e-70 268.1 146 85.6
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 8.4e-70 267.7 146 84.2
Glyma.05G038600 Glycine max HOM05D006234 ORTHO05D007813 1.9e-69 266.5 149 81.2
TPR.G37565 Trifolium pratense HOM05D006234 ORTHO05D007813 1.9e-69 266.5 149 81.2
Glyma.17G088400 Glycine max HOM05D006234 ORTHO05D007813 2.4e-69 266.2 149 80.5
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 2.4e-69 266.2 153 81.0
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 4.2e-69 265.4 142 88.0
Migut.O00096 Erythranthe guttata HOM05D006234 ORTHO05D007813 5.5e-69 265.0 142 87.3
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 5.5e-69 265.0 138 89.1
SGA_v2.0_scaffold114G31825 Striga asiatica HOM05D006234 ORTHO05D007813 5.5e-69 265.0 151 82.1
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 7.1e-69 264.6 145 82.1
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 9.3e-69 264.2 155 77.4
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 1.6e-68 263.5 142 86.6
Medtr4g105610 Medicago truncatula HOM05D006234 ORTHO05D007813 2.7e-68 262.7 149 79.9
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 2.7e-68 262.7 143 84.6
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 3.5e-68 262.3 143 86.0
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 1.8e-67 260.0 144 84.0
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 2.3e-67 259.6 139 84.9
Lalb_Chr13g0297731 Lupinus albus HOM05D006234 ORTHO05D007813 2.3e-67 259.6 149 79.2
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 2.3e-67 259.6 142 83.8
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 3.0e-67 259.2 141 83.7
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 3.0e-67 259.2 144 81.9
ECA246G1070 Erigeron canadensis HOM05D006234 ORTHO05D007813 3.9e-67 258.8 143 82.5
HanXRQChr05g0155761 Helianthus annuus HOM05D006234 ORTHO05D007813 3.9e-67 258.8 142 83.1
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 6.7e-67 258.1 139 84.2
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 6.7e-67 258.1 139 84.2
unitig_60.g25412 Utricularia gibba HOM05D006234 ORTHO05D007813 6.7e-67 258.1 141 83.0
PSO063G7211 Papaver somniferum HOM05D006234 ORTHO05D007813 1.1e-66 257.3 144 81.2
SalBow6G2400 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.1e-66 257.3 142 85.9
MSTRG.9679 Avicennia marina HOM05D006234 ORTHO05D007813 2.5e-66 256.1 139 86.3
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 2.5e-66 256.1 142 82.4
PSO832G4587 Papaver somniferum HOM05D006234 ORTHO05D007813 3.3e-66 255.8 144 80.6
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 5.6e-66 255.0 139 83.5
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 5.6e-66 255.0 142 81.7
Aqoxy3G02888 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 2.1e-65 253.1 138 83.3
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea HOM05D006234 ORTHO05D007813 2.1e-65 253.1 140 82.1
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea HOM05D006234 ORTHO05D007813 2.8e-65 252.7 140 82.9
Phvul.003G201500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 2.8e-65 252.7 142 80.3
PGSC0003DMG401026661 Solanum tuberosum HOM05D006234 ORTHO05D007813 1.5e-63 246.9 179 68.7
VMungo1309G2926 Vigna mungo HOM05D006234 ORTHO05D007813 2.0e-63 246.5 149 73.2
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 2.6e-63 246.1 165 72.7
Glyma.04G184400 Glycine max HOM05D006234 ORTHO05D007813 1.9e-61 240.0 140 76.4
Lj1g0005957 Lotus japonicus HOM05D006234 ORTHO05D007813 2.5e-61 239.6 140 77.1
CDE04G1656 Ceratophyllum demersum HOM05D006234 ORTHO05D007813 4.2e-61 238.8 138 79.0
Phvul.009G177500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 5.5e-61 238.4 152 71.7
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea HOM05D006234 ORTHO05D007813 4.6e-60 235.3 151 71.5
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 6.0e-60 235.0 161 72.7
SEGI_35494 Sequoiadendron giganteum HOM05D006234 ORTHO05D007813 1.8e-59 233.4 149 73.2
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 1.1e-58 230.7 157 70.1
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 1.1e-58 230.7 117 90.6
Actinidia19103 Actinidia chinensis HOM05D006234 ORTHO05D007813 1.5e-58 230.3 120 88.3
Glyma.06G181500 Glycine max HOM05D006234 ORTHO05D007813 8.2e-57 224.6 137 73.0
VMungo1215G2331 Vigna mungo HOM05D006234 ORTHO05D007813 1.4e-56 223.8 117 88.9
CAN.G263.4 Capsicum annuum HOM05D006234 ORTHO05D007813 1.8e-56 223.4 129 82.2
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 1.7e-54 216.9 174 62.6
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 2.2e-54 216.5 108 93.5
arahy.Tifrunner.gnm1.ann1.68I129 Arachis hypogaea HOM05D006234 ORTHO05D007813 1.4e-53 213.8 151 66.9
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 2.1e-52 209.9 107 90.7
HanXRQChr05g0132691 Helianthus annuus HOM05D006234 ORTHO05D007813 4.6e-52 208.8 117 79.5
SalBow1G2571 Salvia bowleyana HOM05D006234 ORTHO05D007813 6.9e-48 194.9 162 63.6
Pp3c21_1540 Physcomitrium patens HOM05D006234 ORTHO05D007813 3.0e-43 179.5 145 59.3
Dinv38575 Davidia involucrata HOM05D006234 ORTHO05D007813 5.9e-39 165.2 84 91.7
Aqoxy6G01962 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 6.1e-36 155.2 84 85.7
Prupe.5G172000 Prunus persica HOM05D006234 ORTHO05D007813 4.1e-32 142.5 74 89.2
MCO05G167 Micromonas commoda HOM05D006234 ORTHO05D007813 3.2e-29 132.9 126 50.0
Cre16.g650500 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 2.7e-28 129.8 137 47.4
SalBow1G3204 Salvia bowleyana HOM05D006234 ORTHO05D007813 9.1e-24 114.8 85 68.2
Lalb_Chr08g0236591 Lupinus albus HOM05D006234 ORTHO05D007813 5.9e-23 112.1 63 79.4
SalBow8G5646 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.9e-21 107.1 140 47.1
Cre09.g387134 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 2.8e-17 93.2 133 37.6
arahy.Tifrunner.gnm1.ann1.AH97YV Arachis hypogaea HOM05D006234 ORTHO05D007813 3.5e-15 86.3 55 70.9
PRCOL_00003688 Prasinoderma coloniale HOM05D001043 ORTHO05D006432 4.5e-15 85.9 107 41.1
CSS0016711 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 8.3e-09 65.1 166 31.9
CSS0043871 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 1.1e-08 64.7 151 32.5
ECA240G3866 Erigeron canadensis HOM05D001043 ORTHO05D006432 2.0e-07 60.5 114 33.3
SalBow3G0890 Salvia bowleyana HOM05D001251 ORTHO05D007813 2.7e-07 60.1 30 90.0
HanXRQChr03g0092911 Helianthus annuus HOM05D001043 ORTHO05D006432 1.0e-06 58.2 112 33.0
PGR142G0751 Punica granatum HOM05D001043 ORTHO05D006432 1.3e-06 57.8 116 36.2
Atru.chr4.1261 Acer truncatum HOM05D001043 ORTHO05D006432 3.8e-06 56.2 141 31.2
Thhalv10007687m.g Eutrema salsugineum HOM05D001043 ORTHO05D006432 3.8e-06 56.2 159 32.1
Solyc12g021360.3 Solanum lycopersicum HOM05D006234 ORTHO05D007813 8.6e-06 55.1 42 61.9


User provided reference genes

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