Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 5.1e-148 527.7 262 100.0
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 2.0e-19 100.5 62 77.4
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 8.4e-18 95.1 64 71.9
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.9e-17 94.0 64 67.2
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 1.9e-17 94.0 64 68.8
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 2.4e-17 93.6 64 71.9
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 3.2e-17 93.2 64 68.8
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 3.2e-17 93.2 64 68.8
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 4.2e-17 92.8 64 68.8
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 4.2e-17 92.8 62 72.6
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 5.4e-17 92.4 65 66.2
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 7.1e-17 92.0 64 65.6
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 7.1e-17 92.0 64 70.3
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 9.3e-17 91.7 63 69.8
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 9.3e-17 91.7 64 68.8
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 9.3e-17 91.7 64 67.2
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 1.2e-16 91.3 82 56.1
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 1.2e-16 91.3 62 67.7
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.6e-16 90.9 64 65.6
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 1.6e-16 90.9 64 68.8
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 2.1e-16 90.5 64 67.2
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 4.6e-16 89.4 64 65.6
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 4.6e-16 89.4 64 65.6
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 4.6e-16 89.4 61 67.2
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 4.6e-16 89.4 64 65.6
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 6.0e-16 89.0 64 65.6
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 6.0e-16 89.0 65 64.6
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 7.8e-16 88.6 64 64.1
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 7.8e-16 88.6 64 70.3
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 1.0e-15 88.2 64 65.6
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 3.0e-15 86.7 64 65.6
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 3.0e-15 86.7 62 69.4
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 3.0e-15 86.7 64 64.1
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 3.9e-15 86.3 64 62.5
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 3.9e-15 86.3 64 62.5
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 5.1e-15 85.9 63 65.1
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 5.1e-15 85.9 63 65.1
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 6.6e-15 85.5 82 53.7
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 6.6e-15 85.5 62 58.1
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 8.7e-15 85.1 62 67.7
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 8.7e-15 85.1 62 64.5
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 8.7e-15 85.1 63 65.1
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.1e-14 84.7 62 67.7
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.1e-14 84.7 64 62.5
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 1.5e-14 84.3 82 53.7
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 2.5e-14 83.6 64 62.5
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 2.5e-14 83.6 82 52.4
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 2.5e-14 83.6 82 52.4
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 2.5e-14 83.6 63 65.1
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 3.3e-14 83.2 62 64.5
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 4.3e-14 82.8 62 61.3
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 5.6e-14 82.4 82 53.7
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 5.6e-14 82.4 64 60.9
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 5.6e-14 82.4 66 57.6
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 7.3e-14 82.0 62 61.3
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 7.3e-14 82.0 62 61.3
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 7.3e-14 82.0 62 64.5
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 9.6e-14 81.6 62 64.5
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.6e-13 80.9 82 51.2
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 1.6e-13 80.9 62 64.5
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 3.6e-13 79.7 62 61.3
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 3.6e-13 79.7 64 60.9
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 3.6e-13 79.7 62 61.3
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 4.8e-13 79.3 64 54.7
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 4.8e-13 79.3 64 60.9
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 4.8e-13 79.3 62 59.7
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 4.8e-13 79.3 62 61.3
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 6.2e-13 79.0 62 61.3
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 8.1e-13 78.6 82 50.0
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 8.1e-13 78.6 62 59.7
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 1.1e-12 78.2 62 64.5
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 2.4e-12 77.0 62 58.1
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 2.4e-12 77.0 59 61.0
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 2.4e-12 77.0 62 58.1
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 2.4e-12 77.0 62 58.1
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 3.1e-12 76.6 62 58.1
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 3.1e-12 76.6 60 61.7
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 4.0e-12 76.3 62 61.3
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 4.0e-12 76.3 65 53.8
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 6.9e-12 75.5 62 59.7
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 6.9e-12 75.5 62 53.2
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 9.0e-12 75.1 61 62.3
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 1.2e-11 74.7 63 60.3
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 1.5e-11 74.3 62 56.5
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 1.5e-11 74.3 64 59.4
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 1.5e-11 74.3 61 62.3
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.0e-11 73.9 64 56.2
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.0e-11 73.9 64 54.7
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 2.0e-11 73.9 62 56.5
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 2.6e-11 73.6 56 55.4
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 9.9e-11 71.6 62 51.6
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 8.4e-10 68.6 69 50.7
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 2.1e-08 63.9 70 45.7
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 7.8e-08 62.0 60 53.3
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 2.3e-07 60.5 56 51.8
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 3.9e-07 59.7 60 51.7
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 3.3e-06 56.6 61 45.9


User provided reference genes

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