Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc6.26 Carica papaya HOM05D000726 ORTHO05D007554 0.0e+00 1657.9 878 100.0
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 0.0e+00 1128.6 880 68.4
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 0.0e+00 1114.0 868 68.2
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 0.0e+00 1095.1 870 66.2
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 0.0e+00 1084.7 872 65.7
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 0.0e+00 1082.4 873 65.8
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 0.0e+00 1079.3 879 64.8
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 0.0e+00 1078.2 871 64.6
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 0.0e+00 1076.2 871 64.4
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 1.8e-311 1072.4 868 65.7
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 4.2e-311 1071.2 877 65.7
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 1.6e-310 1069.3 848 66.5
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 2.0e-310 1068.9 871 64.1
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 7.7e-310 1067.0 840 66.8
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 1.7e-309 1065.8 873 64.1
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 2.9e-309 1065.1 874 65.2
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 1.2e-307 1059.7 875 65.0
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 1.6e-307 1059.3 884 63.2
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.2e-305 1053.1 872 64.1
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 4.4e-305 1051.2 849 65.0
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 1.7e-304 1049.3 888 62.5
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 2.3e-301 1038.9 872 63.2
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 2.5e-300 1035.4 875 61.8
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 4.7e-299 1031.2 865 62.9
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 8.0e-299 1030.4 847 63.6
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 8.9e-298 1026.9 883 62.3
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 3.4e-297 1025.0 886 61.3
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.3e-296 1023.1 861 62.3
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 2.9e-296 1021.9 861 63.0
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 6.4e-296 1020.8 877 61.3
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 3.2e-295 1018.5 875 62.7
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 4.1e-295 1018.1 874 61.7
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 7.0e-295 1017.3 869 61.8
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 1.0e-293 1013.4 735 71.2
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 3.0e-293 1011.9 873 61.6
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 3.9e-293 1011.5 865 62.0
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 6.6e-293 1010.7 862 62.9
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 8.1e-291 1003.8 843 62.4
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 1.1e-290 1003.4 855 62.2
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 2.0e-289 999.2 839 64.0
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 2.9e-288 995.3 871 60.7
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 2.9e-288 995.3 880 60.3
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 9.2e-287 990.3 875 60.5
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 3.5e-286 988.4 852 62.3
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 3.9e-285 984.9 860 60.3
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 1.9e-284 982.6 849 61.6
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 4.3e-284 981.5 879 60.6
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 7.3e-284 980.7 875 60.9
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 2.8e-283 978.8 870 60.1
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 1.4e-282 976.5 874 59.6
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 1.8e-282 976.1 856 59.9
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 1.9e-279 966.1 835 61.4
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 5.4e-279 964.5 875 60.0
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 7.1e-279 964.1 882 57.9
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 4.6e-278 961.4 855 61.2
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.7e-277 959.5 859 58.8
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 4.7e-275 951.4 876 59.1
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 8.9e-274 947.2 854 60.5
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 1.5e-273 946.4 804 61.7
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 1.5e-273 946.4 886 57.2
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 4.4e-273 944.9 854 60.4
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 7.6e-273 944.1 882 57.7
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 3.2e-271 938.7 861 59.0
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 7.1e-271 937.6 873 58.3
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 1.2e-270 936.8 886 57.4
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 2.1e-270 936.0 865 57.9
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 4.6e-270 934.9 886 57.2
HanXRQChr12g0373111 Helianthus annuus HOM05D000726 ORTHO05D007554 1.3e-269 933.3 856 57.6
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 3.0e-269 932.2 852 59.5
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 3.0e-269 932.2 893 57.1
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 6.6e-269 931.0 862 58.4
Aqoxy6G02647 Aquilegia oxysepala HOM05D000726 ORTHO05D007554 1.9e-268 929.5 891 56.5
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 1.4e-266 923.3 888 56.3
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 3.1e-266 922.2 895 56.3
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 9.0e-266 920.6 880 56.1
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 4.5e-265 918.3 849 57.8
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 2.2e-264 916.0 866 57.4
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 2.9e-264 915.6 883 56.5
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 1.9e-263 912.9 868 56.6
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 5.4e-263 911.4 881 55.2
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 1.6e-262 909.8 875 56.5
A07p32680 Brassica napus HOM05D000726 ORTHO05D007554 4.6e-262 908.3 864 58.8
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 8.7e-261 904.0 864 58.7
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 4.8e-259 898.3 867 56.7
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 5.8e-257 891.3 906 54.4
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.7e-256 889.8 865 56.8
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 5.7e-244 848.2 873 52.7
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 2.6e-241 839.3 861 54.6
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.5e-239 832.8 856 54.2
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 3.1e-234 815.8 822 55.5
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 2.4e-226 789.6 648 63.3
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 2.1e-222 776.5 610 67.0
ATR0208G028 Amborella trichopoda HOM05D000726 ORTHO05D007554 2.0e-220 770.0 918 47.1
CDE04G3158 Ceratophyllum demersum HOM05D000726 ORTHO05D007554 3.5e-217 759.2 763 54.1
unitig_0.g505 Utricularia gibba HOM05D000726 ORTHO05D007554 6.8e-197 691.8 721 51.7
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 5.2e-189 665.6 607 59.0
SEGI_06920 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 7.3e-175 618.6 893 40.0
HPP92_014039 Vanilla planifolia HOM05D000726 ORTHO05D007554 1.4e-173 614.4 578 56.1
GSVIVG01000124001 Vitis vinifera HOM05D000726 ORTHO05D007554 1.3e-168 597.8 403 74.7
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 3.9e-168 596.3 733 44.5
SMO364G0657 Selaginella moellendorffii HOM05D000726 ORTHO05D007554 6.8e-165 585.5 810 41.1
Os03g0616500 Oryza sativa ssp. japonica HOM05D000726 ORTHO05D007554 3.8e-163 579.7 741 43.3
Mapoly0045s0033 Marchantia polymorpha HOM05D000726 ORTHO05D007554 9.6e-159 565.1 872 38.4
SalBow3G2688 Salvia bowleyana HOM05D000726 ORTHO05D007554 5.6e-151 539.3 518 55.0
CiPaw.01G005400 Carya illinoinensis HOM05D000726 ORTHO05D007554 8.1e-150 535.4 427 66.0
AagrBONN_evm.TU.Sc2ySwM_117.495 Anthoceros agrestis HOM05D000726 ORTHO05D007554 2.4e-149 533.9 734 41.3
HPP92_028352 Vanilla planifolia HOM05D000726 ORTHO05D007554 5.5e-130 469.5 637 42.7
SEGI_38739 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 2.5e-114 417.5 551 42.6
Oeu003558.1 Olea europaea HOM05D000726 ORTHO05D007554 2.3e-112 411.0 365 61.9
Sabra16G0084600 Salix brachista HOM05D000726 ORTHO05D007554 1.4e-106 391.7 358 60.6
Sabra11G0026400 Salix brachista HOM05D000726 ORTHO05D007554 1.2e-105 388.7 351 61.8
Sabra11G0056500 Salix brachista HOM05D000726 ORTHO05D007554 3.9e-104 383.6 347 61.4
Glyma.11G048432 Glycine max HOM05D000726 ORTHO05D007554 2.0e-95 354.8 236 74.2
PRCOL_00006071 Prasinoderma coloniale HOM05D000726 ORTHO05D007554 5.4e-85 320.1 494 35.8
Cre06.g262800 Chlamydomonas reinhardtii HOM05D000726 ORTHO05D007554 1.5e-74 285.4 489 36.0
RcHm_v2.0_Chr2g0138441 Rosa chinensis HOM05D000726 ORTHO05D007554 1.4e-64 252.3 372 42.7
CBR_g29418 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-61 241.1 347 35.4
SEGI_24863 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 1.1e-53 216.1 297 39.7
Glyma.08G243550 Glycine max HOM05D000726 ORTHO05D025659 1.5e-34 152.5 158 50.6
HPP92_014040 Vanilla planifolia HOM05D000726 ORTHO05D007554 6.9e-24 117.1 264 30.3
Lj7C94G0 Lonicera japonica HOM05D000726 ORTHO05D007554 3.9e-19 101.3 202 34.2
Psat3g174600 Pisum sativum HOM05D000726 ORTHO05D025659 2.2e-14 85.5 118 39.8
Psat0s3193g0080 Pisum sativum HOM05D000726 ORTHO05D025659 3.8e-14 84.7 118 39.0
Psat3g172760 Pisum sativum HOM05D000726 ORTHO05D025659 5.5e-13 80.9 118 39.8
Psat3g174680 Pisum sativum HOM05D000726 ORTHO05D025659 7.1e-13 80.5 118 39.0
Lsat_1_v5_gn_2_113660 Lactuca sativa HOM05D000726 ORTHO05D007554 1.8e-11 75.9 61 59.0
CiPaw.01G005300 Carya illinoinensis HOM05D000726 ORTHO05D007554 8.2e-09 67.0 69 55.1
Nn1g04578 Nelumbo nucifera HOM05D000726 ORTHO05D007554 7.7e-07 60.5 73 46.6


User provided reference genes

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