Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc53.78 Carica papaya HOM05D007562 ORTHO05D009721 4.9e-216 754.2 390 100.0
Cpa.g.sc53.79 Carica papaya HOM05D007562 ORTHO05D009721 1.4e-48 198.0 353 38.8
Atru.chr12.774 Acer truncatum HOM05D007562 ORTHO05D009721 9.8e-23 112.1 453 26.3
Thecc.10G073300 Theobroma cacao HOM05D007562 ORTHO05D009721 3.5e-20 103.6 283 28.3
CiPaw.01G273100 Carya illinoinensis HOM05D007562 ORTHO05D009721 6.8e-16 89.4 252 29.4
Psat1g112000 Pisum sativum HOM05D007562 ORTHO05D009721 1.2e-15 88.6 440 26.1
Duzib114G0316 Durio zibethinus HOM05D007562 ORTHO05D009721 1.5e-15 88.2 218 31.7
Atru.chr12.749 Acer truncatum HOM05D007562 ORTHO05D009721 5.8e-15 86.3 447 24.8
FAN01G2123 Fragaria x ananassa HOM05D007562 ORTHO05D009721 6.4e-14 82.8 469 26.2
Cfa021509 Carpinus fangiana HOM05D007562 ORTHO05D009721 1.4e-13 81.6 425 24.9
Gohir.D06G174900 Gossypium hirsutum HOM05D007562 ORTHO05D009721 5.4e-13 79.7 483 23.6
Gohir.A06G167500 Gossypium hirsutum HOM05D007562 ORTHO05D009721 2.1e-12 77.8 478 22.6
MD07G1174900 Malus domestica HOM05D007562 ORTHO05D009721 2.7e-12 77.4 464 21.1
Haze_16895 Corylus avellana HOM05D007562 ORTHO05D009721 1.3e-11 75.1 425 23.8
FvH4_7g19620 Fragaria vesca HOM05D007562 ORTHO05D009721 5.1e-11 73.2 474 24.9
PSO063G7346 Papaver somniferum HOM05D007562 ORTHO05D009721 5.6e-10 69.7 244 23.8
Lj2g0025537 Lotus japonicus HOM05D007562 ORTHO05D009721 1.2e-09 68.6 320 23.8
Prupe.2G214000 Prunus persica HOM05D007562 ORTHO05D009721 2.1e-09 67.8 250 26.0
Rhsim09G0152200 Rhododendron simsii HOM05D007562 ORTHO05D009721 2.8e-09 67.4 449 23.6
Gorai.010G205300 Gossypium raimondii HOM05D007562 ORTHO05D009721 4.7e-09 66.6 211 24.2
Glyma.16G154800 Glycine max HOM05D007562 ORTHO05D009721 6.2e-09 66.2 305 22.6
Medtr6g060178 Medicago truncatula HOM05D007562 ORTHO05D009721 6.2e-09 66.2 283 24.7
PSO339G1903 Papaver somniferum HOM05D007562 ORTHO05D009721 1.1e-08 65.5 236 24.2
FAN03G1079 Fragaria x ananassa HOM05D007562 ORTHO05D009721 2.4e-08 64.3 291 25.8
Manes.07G100520 Manihot esculenta HOM05D007562 ORTHO05D009721 3.1e-08 63.9 221 22.6
VMungo0464G0183 Vigna mungo HOM05D007562 ORTHO05D009721 3.1e-08 63.9 252 22.6
Potri.010G222200 Populus trichocarpa HOM05D007562 ORTHO05D009721 6.9e-08 62.8 214 24.8
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 1.2e-07 62.0 283 24.7
CARHR198320 Cardamine hirsuta HOM05D007562 ORTHO05D009721 2.0e-07 61.2 326 23.9
RcHm_v2.0_Chr1g0363431 Rosa chinensis HOM05D007562 ORTHO05D009721 2.0e-07 61.2 294 26.9
Carub.0006s1315 Capsella rubella HOM05D007562 ORTHO05D009721 3.4e-07 60.5 261 26.1
Aa31LG11G14520 Aethionema arabicum HOM05D007562 ORTHO05D009721 7.6e-07 59.3 422 24.2
ATR0165G056 Amborella trichopoda HOM05D004088 ORTHO05D004736 2.2e-06 57.8 407 22.6
MELO3C007071.2 Cucumis melo HOM05D004088 ORTHO05D004736 2.2e-06 57.8 399 23.3
Phvul.004G082400 Phaseolus vulgaris HOM05D007562 ORTHO05D009721 2.2e-06 57.8 205 24.4
AL6G25790 Arabidopsis lyrata HOM05D007562 ORTHO05D009721 2.9e-06 57.4 242 25.2
Duzib235G1173 Durio zibethinus HOM05D004088 ORTHO05D004736 2.9e-06 57.4 407 23.6
FvH4_3g10170 Fragaria vesca HOM05D004088 ORTHO05D004736 3.8e-06 57.0 408 22.8
Ciclev10034000m.g Citrus clementina HOM05D007562 ORTHO05D004736 4.9e-06 56.6 57 54.4
CsaV3_6G052390 Cucumis sativus L. HOM05D004088 ORTHO05D004736 6.4e-06 56.2 399 21.6


User provided reference genes

Program Settings